RNA–Protein interactions for RNA: ENST00000488590.1

SUPT20H-218, Transcript of SPT20 homolog, SAGA complex component, humanhuman

TSL 4

Gene SUPT20H, Length 572 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT20H-218ENST00000488590 SETD1BQ9UPS6 1966 aaKnown RBP16.4■□□□□ 0.22
SUPT20H-218ENST00000488590 NCOA1Q15788 1441 aa16.37■□□□□ 0.21
SUPT20H-218ENST00000488590 ATP10AO60312 1499 aa16.37■□□□□ 0.21
SUPT20H-218ENST00000488590 UBAP1LF5GYI3 381 aa16.37■□□□□ 0.21
SUPT20H-218ENST00000488590 P3H3Q8IVL6 736 aa16.36■□□□□ 0.21
SUPT20H-218ENST00000488590 CFAP74Q9C0B2 1584 aa16.35■□□□□ 0.21
SUPT20H-218ENST00000488590 C9orf84Q5VXU9 1444 aa16.35■□□□□ 0.21
SUPT20H-218ENST00000488590 NUP153P49790 1475 aaKnown RBP16.35■□□□□ 0.21
SUPT20H-218ENST00000488590 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.35■□□□□ 0.21
SUPT20H-218ENST00000488590 RAPGEF6Q8TEU7 1601 aa16.34■□□□□ 0.21
SUPT20H-218ENST00000488590 ZNF335Q9H4Z2 1342 aaPredicted RBP16.33■□□□□ 0.2
SUPT20H-218ENST00000488590 HSPA1LP34931 641 aa16.31■□□□□ 0.2
SUPT20H-218ENST00000488590 SCAPERQ9BY12 1400 aa16.3■□□□□ 0.2
SUPT20H-218ENST00000488590 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.3■□□□□ 0.2
SUPT20H-218ENST00000488590 HNRNPUL2Q1KMD3 747 aaKnown RBP16.3■□□□□ 0.2
SUPT20H-218ENST00000488590 C3P01024 1663 aa16.3■□□□□ 0.2
SUPT20H-218ENST00000488590 PRXQ9BXM0 1461 aa16.28■□□□□ 0.2
SUPT20H-218ENST00000488590 TRAPPC8Q9Y2L5 1435 aa16.28■□□□□ 0.2
SUPT20H-218ENST00000488590 SAMD9Q5K651 1589 aa16.26■□□□□ 0.19
SUPT20H-218ENST00000488590 PLEKHD1A6NEE1 506 aa16.25■□□□□ 0.19
SUPT20H-218ENST00000488590 FAM9AQ8IZU1 332 aaPredicted RBP16.25■□□□□ 0.19
SUPT20H-218ENST00000488590 CAMSAP1Q5T5Y3 1602 aa16.24■□□□□ 0.19
SUPT20H-218ENST00000488590 NCKAP5LQ9HCH0 1330 aa16.23■□□□□ 0.19
SUPT20H-218ENST00000488590 PLCH2O75038 1416 aa16.23■□□□□ 0.19
SUPT20H-218ENST00000488590 REREQ9P2R6 1566 aa16.19■□□□□ 0.18
SUPT20H-218ENST00000488590 KDM5CP41229 1560 aa16.17■□□□□ 0.18
SUPT20H-218ENST00000488590 DIP2CQ9Y2E4 1556 aa16.17■□□□□ 0.18
SUPT20H-218ENST00000488590 PHF23Q9BUL5 403 aaPredicted RBP16.17■□□□□ 0.18
SUPT20H-218ENST00000488590 TCOF1Q13428 1488 aaKnown RBP16.16■□□□□ 0.18
SUPT20H-218ENST00000488590 AGLP35573 1532 aa16.16■□□□□ 0.18
SUPT20H-218ENST00000488590 PIP4K2BP78356 416 aa16.16■□□□□ 0.18
SUPT20H-218ENST00000488590 RGS17Q9UGC6 210 aaPredicted RBP16.16■□□□□ 0.18
SUPT20H-218ENST00000488590 AFAP1Q8N556 730 aa16.15■□□□□ 0.18
SUPT20H-218ENST00000488590 NPATQ14207 1427 aa16.14■□□□□ 0.17
SUPT20H-218ENST00000488590 ALKQ9UM73 1620 aa16.14■□□□□ 0.17
SUPT20H-218ENST00000488590 PLA2R1Q13018 1463 aa16.14■□□□□ 0.17
SUPT20H-218ENST00000488590 ZNF518AQ6AHZ1 1483 aa16.14■□□□□ 0.17
SUPT20H-218ENST00000488590 SCAF1Q9H7N4 1312 aaKnown RBP16.13■□□□□ 0.17
SUPT20H-218ENST00000488590 PKD2Q13563 968 aa16.12■□□□□ 0.17
SUPT20H-218ENST00000488590 ABCA6Q8N139 1617 aa16.12■□□□□ 0.17
SUPT20H-218ENST00000488590 TOM1O60784 492 aa16.11■□□□□ 0.17
SUPT20H-218ENST00000488590 EFCAB2Q5VUJ9 269 aa16.11■□□□□ 0.17
SUPT20H-218ENST00000488590 CNTLNQ9NXG0 1405 aa16.11■□□□□ 0.17
SUPT20H-218ENST00000488590 MLH3Q9UHC1 1453 aa16.09■□□□□ 0.17
SUPT20H-218ENST00000488590 PPP6R1Q9UPN7 881 aa16.07■□□□□ 0.16
SUPT20H-218ENST00000488590 CDK13Q14004 1512 aaKnown RBP16.07■□□□□ 0.16
SUPT20H-218ENST00000488590 ZNF142P52746 1687 aaPredicted RBP16.06■□□□□ 0.16
SUPT20H-218ENST00000488590 ZMYM3Q14202 1370 aa16.06■□□□□ 0.16
SUPT20H-218ENST00000488590 ESF1Q9H501 851 aaKnown RBP16.06■□□□□ 0.16
SUPT20H-218ENST00000488590 MROH2AA6NES4 1674 aa16.05■□□□□ 0.16
SUPT20H-218ENST00000488590 CPS1P31327 1500 aa16.04■□□□□ 0.16
SUPT20H-218ENST00000488590 MYO5CQ9NQX4 1742 aa16.04■□□□□ 0.16
SUPT20H-218ENST00000488590 MYO3AQ8NEV4 1616 aa16.04■□□□□ 0.16
SUPT20H-218ENST00000488590 CEP170BQ9Y4F5 1589 aaPredicted RBP16.03■□□□□ 0.16
SUPT20H-218ENST00000488590 SHANK2Q9UPX8 1470 aa16.02■□□□□ 0.15
SUPT20H-218ENST00000488590 PTPRKQ15262 1439 aa16■□□□□ 0.15
SUPT20H-218ENST00000488590 MYT1LQ9UL68 1186 aa15.99■□□□□ 0.15
SUPT20H-218ENST00000488590 KIF14Q15058 1648 aa15.98■□□□□ 0.15
SUPT20H-218ENST00000488590 POTEAQ6S8J7 498 aa15.98■□□□□ 0.15
SUPT20H-218ENST00000488590 NEURL4Q96JN8 1562 aa15.98■□□□□ 0.15
SUPT20H-218ENST00000488590 KIDINS220Q9ULH0 1771 aa15.98■□□□□ 0.15
SUPT20H-218ENST00000488590 ARHGAP5Q13017 1502 aa15.97■□□□□ 0.15
SUPT20H-218ENST00000488590 SRCAPQ6ZRS2 3230 aa15.97■□□□□ 0.15
SUPT20H-218ENST00000488590 VWDEQ8N2E2 1590 aa15.96■□□□□ 0.14
SUPT20H-218ENST00000488590 SUPT6HQ7KZ85 1726 aaKnown RBP15.95■□□□□ 0.14
SUPT20H-218ENST00000488590 RANGAP1P46060 587 aaPredicted RBP15.95■□□□□ 0.14
SUPT20H-218ENST00000488590 DNMT1P26358 1616 aaKnown RBP15.94■□□□□ 0.14
SUPT20H-218ENST00000488590 ABCC1P33527 1531 aa15.93■□□□□ 0.14
SUPT20H-218ENST00000488590 SENP3Q9H4L4 574 aaPredicted RBP15.92■□□□□ 0.14
SUPT20H-218ENST00000488590 CLTCQ00610 1675 aaKnown RBP15.92■□□□□ 0.14
SUPT20H-218ENST00000488590 A2ML1A8K2U0 1454 aa15.91■□□□□ 0.14
SUPT20H-218ENST00000488590 CDC42BPBQ9Y5S2 1711 aa15.91■□□□□ 0.14
SUPT20H-218ENST00000488590 POLR1AO95602 1720 aaPredicted RBP15.88■□□□□ 0.13
SUPT20H-218ENST00000488590 TROQ12816 1431 aaPredicted RBP15.88■□□□□ 0.13
SUPT20H-218ENST00000488590 ITSN2Q9NZM3 1697 aa15.88■□□□□ 0.13
SUPT20H-218ENST00000488590 CSRNP3Q8WYN3 585 aa15.87■□□□□ 0.13
SUPT20H-218ENST00000488590 LRRC7Q96NW7 1537 aa15.86■□□□□ 0.13
SUPT20H-218ENST00000488590 SETD1AO15047 1707 aaKnown RBP15.85■□□□□ 0.13
SUPT20H-218ENST00000488590 PLXNC1O60486 1568 aa15.85■□□□□ 0.13
SUPT20H-218ENST00000488590 STRCP1A6NGW2 1772 aa15.85■□□□□ 0.13
SUPT20H-218ENST00000488590 SAMD9LQ8IVG5 1584 aa15.84■□□□□ 0.13
SUPT20H-218ENST00000488590 MED14O60244 1454 aa15.84■□□□□ 0.13
SUPT20H-218ENST00000488590 PREX2Q70Z35 1606 aa15.83■□□□□ 0.12
SUPT20H-218ENST00000488590 CDK11AQ9UQ88 783 aaPredicted RBP15.82■□□□□ 0.12
SUPT20H-218ENST00000488590 RNF17Q9BXT8 1623 aaKnown RBP15.82■□□□□ 0.12
SUPT20H-218ENST00000488590 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.8■□□□□ 0.12
SUPT20H-218ENST00000488590 NPHP4O75161 1426 aaPredicted RBP15.79■□□□□ 0.12
SUPT20H-218ENST00000488590 ANKLE2Q86XL3 938 aa15.79■□□□□ 0.12
SUPT20H-218ENST00000488590 UPF1Q92900 1129 aaKnown RBP eCLIP15.79■□□□□ 0.12
SUPT20H-218ENST00000488590 FBXO31Q5XUX0 539 aaPredicted RBP15.78■□□□□ 0.12
SUPT20H-218ENST00000488590 GGT6Q6P531 493 aa15.78■□□□□ 0.12
SUPT20H-218ENST00000488590 A2MP01023 1474 aa15.78■□□□□ 0.12
SUPT20H-218ENST00000488590 CLIP1P30622 1438 aa15.77■□□□□ 0.12
SUPT20H-218ENST00000488590 DEPDC5O75140 1603 aa15.77■□□□□ 0.12
SUPT20H-218ENST00000488590 ATP1B4Q9UN42 357 aaPredicted RBP15.76■□□□□ 0.11
SUPT20H-218ENST00000488590 TNRQ92752 1358 aa15.75■□□□□ 0.11
SUPT20H-218ENST00000488590 SYNMO15061 1565 aa15.75■□□□□ 0.11
SUPT20H-218ENST00000488590 SPAG9O60271 1321 aaKnown RBP15.75■□□□□ 0.11
SUPT20H-218ENST00000488590 LRRIQ1Q96JM4 1722 aa15.74■□□□□ 0.11
SUPT20H-218ENST00000488590 ATP7AQ04656 1500 aa15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms