RNA–Protein interactions for RNA: ENST00000488053.1

TNFSF4-203, Transcript of TNF superfamily member 4, humanhuman

TSL 3

Gene TNFSF4, Length 520 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4-203ENST00000488053 FBXO22Q8NEZ5 403 aa11.98□□□□□ -0.49
TNFSF4-203ENST00000488053 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.97□□□□□ -0.49
TNFSF4-203ENST00000488053 SLC24A1O60721 1099 aa11.95□□□□□ -0.5
TNFSF4-203ENST00000488053 POTEIP0CG38 1075 aa11.95□□□□□ -0.5
TNFSF4-203ENST00000488053 PELP1Q8IZL8 1130 aaKnown RBP11.95□□□□□ -0.5
TNFSF4-203ENST00000488053 SLC39A7Q92504 469 aa11.95□□□□□ -0.5
TNFSF4-203ENST00000488053 ILDR1Q86SU0 546 aaPredicted RBP11.94□□□□□ -0.5
TNFSF4-203ENST00000488053 MRC2Q9UBG0 1479 aa11.94□□□□□ -0.5
TNFSF4-203ENST00000488053 C7P10643 843 aa11.93□□□□□ -0.5
TNFSF4-203ENST00000488053 HAP1P54257 671 aaPredicted RBP11.91□□□□□ -0.5
TNFSF4-203ENST00000488053 IRX5P78411 483 aaPredicted RBP11.91□□□□□ -0.5
TNFSF4-203ENST00000488053 OCEL1Q9H607 264 aa11.91□□□□□ -0.5
TNFSF4-203ENST00000488053 PLCG2P16885 1265 aa11.9□□□□□ -0.5
TNFSF4-203ENST00000488053 MS4A4AQ96JQ5 239 aa11.9□□□□□ -0.5
TNFSF4-203ENST00000488053 WDR62O43379 1518 aa11.9□□□□□ -0.5
TNFSF4-203ENST00000488053 SEC24BO95487 1268 aa11.89□□□□□ -0.51
TNFSF4-203ENST00000488053 METRNQ9UJH8 293 aa11.89□□□□□ -0.51
TNFSF4-203ENST00000488053 CEP164Q9UPV0 1460 aa11.89□□□□□ -0.51
TNFSF4-203ENST00000488053 RSF1Q96T23 1441 aaPredicted RBP11.88□□□□□ -0.51
TNFSF4-203ENST00000488053 FANCD2Q9BXW9 1451 aa11.88□□□□□ -0.51
TNFSF4-203ENST00000488053 PDCD7Q8N8D1 485 aaKnown RBP11.87□□□□□ -0.51
TNFSF4-203ENST00000488053 TOP2AP11388 1531 aaKnown RBP11.86□□□□□ -0.51
TNFSF4-203ENST00000488053 CFTRP13569 1480 aa11.83□□□□□ -0.52
TNFSF4-203ENST00000488053 PPP1R37O75864 691 aa11.83□□□□□ -0.52
TNFSF4-203ENST00000488053 TSHZ2Q9NRE2 1034 aa11.83□□□□□ -0.52
TNFSF4-203ENST00000488053 COLQQ9Y215 455 aaPredicted RBP11.82□□□□□ -0.52
TNFSF4-203ENST00000488053 DPY19L2Q6NUT2 758 aa11.8□□□□□ -0.52
TNFSF4-203ENST00000488053 G3V3G9 751 aa11.79□□□□□ -0.52
TNFSF4-203ENST00000488053 L3MBTL3Q96JM7 780 aaPredicted RBP11.79□□□□□ -0.52
TNFSF4-203ENST00000488053 URB2Q14146 1524 aaKnown RBP11.78□□□□□ -0.52
TNFSF4-203ENST00000488053 POTEFA5A3E0 1075 aa11.77□□□□□ -0.53
TNFSF4-203ENST00000488053 PRDM2Q13029 1718 aa11.77□□□□□ -0.53
TNFSF4-203ENST00000488053 VSIG10Q8N0Z9 540 aa11.76□□□□□ -0.53
TNFSF4-203ENST00000488053 BOLA1Q9Y3E2 137 aa11.76□□□□□ -0.53
TNFSF4-203ENST00000488053 MICALL2Q8IY33 904 aa11.74□□□□□ -0.53
TNFSF4-203ENST00000488053 CCDC88BA6NC98 1476 aa11.73□□□□□ -0.53
TNFSF4-203ENST00000488053 TMEM121BQ9BXQ6 578 aaPredicted RBP11.72□□□□□ -0.53
TNFSF4-203ENST00000488053 CADPS2Q86UW7 1296 aa11.69□□□□□ -0.54
TNFSF4-203ENST00000488053 ZNF608Q9ULD9 1512 aaPredicted RBP11.65□□□□□ -0.54
TNFSF4-203ENST00000488053 C3orf67Q6ZVT6 689 aa11.65□□□□□ -0.54
TNFSF4-203ENST00000488053 KDM2AQ9Y2K7 1162 aa11.65□□□□□ -0.54
TNFSF4-203ENST00000488053 TOPBP1Q92547 1522 aa11.65□□□□□ -0.55
TNFSF4-203ENST00000488053 PDE4AP27815 886 aa11.63□□□□□ -0.55
TNFSF4-203ENST00000488053 IFT140Q96RY7 1462 aa11.63□□□□□ -0.55
TNFSF4-203ENST00000488053 CRISPLD2Q9H0B8 497 aa11.62□□□□□ -0.55
TNFSF4-203ENST00000488053 WDR70Q9NW82 654 aa11.61□□□□□ -0.55
TNFSF4-203ENST00000488053 NCKAP5LQ9HCH0 1330 aa11.6□□□□□ -0.55
TNFSF4-203ENST00000488053 TMC2Q8TDI7 906 aa11.6□□□□□ -0.55
TNFSF4-203ENST00000488053 DNMBPQ6XZF7 1577 aa11.59□□□□□ -0.55
TNFSF4-203ENST00000488053 MAMSTRQ6ZN01 415 aa11.59□□□□□ -0.55
TNFSF4-203ENST00000488053 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.59□□□□□ -0.55
TNFSF4-203ENST00000488053 EIF4G3O43432 1585 aaKnown RBP11.58□□□□□ -0.55
TNFSF4-203ENST00000488053 LARP6Q9BRS8 491 aaKnown RBP11.58□□□□□ -0.56
TNFSF4-203ENST00000488053 GPHNQ9NQX3 736 aaPredicted RBP11.58□□□□□ -0.56
TNFSF4-203ENST00000488053 RIMBP3CA6NJZ7 1639 aa11.57□□□□□ -0.56
TNFSF4-203ENST00000488053 RIMBP3BA6NNM3 1639 aa11.57□□□□□ -0.56
TNFSF4-203ENST00000488053 RIMBP3Q9UFD9 1639 aa11.57□□□□□ -0.56
TNFSF4-203ENST00000488053 POTEB2H3BUK9 544 aa11.57□□□□□ -0.56
TNFSF4-203ENST00000488053 ABCC8Q09428 1581 aa11.57□□□□□ -0.56
TNFSF4-203ENST00000488053 MFSD10Q14728 455 aa11.56□□□□□ -0.56
TNFSF4-203ENST00000488053 DDX27Q96GQ7 796 aaKnown RBP11.56□□□□□ -0.56
TNFSF4-203ENST00000488053 POTEJP0CG39 1038 aa11.55□□□□□ -0.56
TNFSF4-203ENST00000488053 SCUBE2Q9NQ36 999 aa11.55□□□□□ -0.56
TNFSF4-203ENST00000488053 AQRO60306 1485 aaKnown RBP eCLIP11.55□□□□□ -0.56
TNFSF4-203ENST00000488053 TARBP1Q13395 1621 aaKnown RBP11.54□□□□□ -0.56
TNFSF4-203ENST00000488053 CHD1O14646 1710 aa11.54□□□□□ -0.56
TNFSF4-203ENST00000488053 C2orf72A6NCS6 295 aa11.53□□□□□ -0.56
TNFSF4-203ENST00000488053 KIF3CO14782 793 aa11.53□□□□□ -0.56
TNFSF4-203ENST00000488053 POLA1P09884 1462 aaPredicted RBP11.52□□□□□ -0.56
TNFSF4-203ENST00000488053 ARHGEF11O15085 1522 aa11.52□□□□□ -0.57
TNFSF4-203ENST00000488053 TMEM92Q6UXU6 159 aa11.52□□□□□ -0.57
TNFSF4-203ENST00000488053 RAD54L2Q9Y4B4 1467 aa11.51□□□□□ -0.57
TNFSF4-203ENST00000488053 PPP1R15BQ5SWA1 713 aa11.51□□□□□ -0.57
TNFSF4-203ENST00000488053 FOXK1P85037 733 aa11.5□□□□□ -0.57
TNFSF4-203ENST00000488053 P3H3Q8IVL6 736 aa11.5□□□□□ -0.57
TNFSF4-203ENST00000488053 DSG2Q14126 1118 aa11.49□□□□□ -0.57
TNFSF4-203ENST00000488053 LHX8Q68G74 356 aa11.48□□□□□ -0.57
TNFSF4-203ENST00000488053 TDRD9Q8NDG6 1382 aaKnown RBP11.47□□□□□ -0.57
TNFSF4-203ENST00000488053 E2F4Q16254 413 aa11.47□□□□□ -0.57
TNFSF4-203ENST00000488053 SOGA1O94964 1423 aa11.46□□□□□ -0.57
TNFSF4-203ENST00000488053 CYB5RLQ6IPT4 315 aa11.46□□□□□ -0.57
TNFSF4-203ENST00000488053 FGD5Q6ZNL6 1462 aa11.45□□□□□ -0.58
TNFSF4-203ENST00000488053 PLPP6Q8IY26 295 aa11.45□□□□□ -0.58
TNFSF4-203ENST00000488053 SLAIN1Q8ND83 568 aa11.45□□□□□ -0.58
TNFSF4-203ENST00000488053 CUX1P39880 1505 aa11.44□□□□□ -0.58
TNFSF4-203ENST00000488053 CAMK2BQ13554 666 aa11.43□□□□□ -0.58
TNFSF4-203ENST00000488053 SNAPC4Q5SXM2 1469 aa11.43□□□□□ -0.58
TNFSF4-203ENST00000488053 ARAP1Q96P48 1450 aa11.41□□□□□ -0.58
TNFSF4-203ENST00000488053 SUPT5HO00267 1087 aaKnown RBP11.41□□□□□ -0.58
TNFSF4-203ENST00000488053 KCNV2Q8TDN2 545 aa11.41□□□□□ -0.58
TNFSF4-203ENST00000488053 OTUD5Q96G74 571 aa11.39□□□□□ -0.59
TNFSF4-203ENST00000488053 CHMP7Q8WUX9 453 aaPredicted RBP11.38□□□□□ -0.59
TNFSF4-203ENST00000488053 ARHGEF1Q92888 912 aaKnown RBP11.38□□□□□ -0.59
TNFSF4-203ENST00000488053 WDR97A6NE52 1622 aa11.37□□□□□ -0.59
TNFSF4-203ENST00000488053 PBRM1Q86U86 1689 aa11.36□□□□□ -0.59
TNFSF4-203ENST00000488053 ARIH1Q9Y4X5 557 aaPredicted RBP11.36□□□□□ -0.59
TNFSF4-203ENST00000488053 GRIN2BQ13224 1484 aa11.36□□□□□ -0.59
TNFSF4-203ENST00000488053 CLASP1Q7Z460 1538 aa11.35□□□□□ -0.59
TNFSF4-203ENST00000488053 MAGI1Q96QZ7 1491 aaPredicted RBP11.35□□□□□ -0.59
TNFSF4-203ENST00000488053 SYNJ1O43426 1573 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms