RNA–Protein interactions for RNA: ENST00000487913.5

NR1H3-224, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 2

Gene NR1H3, Length 852 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-224ENST00000487913 HECW1Q76N89 1606 aa23.05■■□□□ 1.28
NR1H3-224ENST00000487913 CEBPAP49715 358 aaPredicted RBP23.05■■□□□ 1.28
NR1H3-224ENST00000487913 PREX1Q8TCU6 1659 aa23.03■■□□□ 1.28
NR1H3-224ENST00000487913 ARHGEF12Q9NZN5 1544 aa23.03■■□□□ 1.28
NR1H3-224ENST00000487913 DMRT2Q9Y5R5 561 aa23.01■■□□□ 1.27
NR1H3-224ENST00000487913 STRCQ7RTU9 1775 aa23.01■■□□□ 1.27
NR1H3-224ENST00000487913 SCAPERQ9BY12 1400 aa22.99■■□□□ 1.27
NR1H3-224ENST00000487913 RANGAP1P46060 587 aaPredicted RBP22.98■■□□□ 1.27
NR1H3-224ENST00000487913 ATP10AO60312 1499 aa22.97■■□□□ 1.27
NR1H3-224ENST00000487913 C9orf84Q5VXU9 1444 aa22.96■■□□□ 1.27
NR1H3-224ENST00000487913 UHRF1BP1Q6BDS2 1440 aa22.94■■□□□ 1.26
NR1H3-224ENST00000487913 PLCH2O75038 1416 aa22.91■■□□□ 1.26
NR1H3-224ENST00000487913 PTPRTO14522 1441 aa22.9■■□□□ 1.26
NR1H3-224ENST00000487913 CSRNP3Q8WYN3 585 aa22.88■■□□□ 1.25
NR1H3-224ENST00000487913 LTBP4Q8N2S1 1624 aa22.87■■□□□ 1.25
NR1H3-224ENST00000487913 CDK13Q14004 1512 aaKnown RBP22.87■■□□□ 1.25
NR1H3-224ENST00000487913 EFCAB2Q5VUJ9 269 aa22.81■■□□□ 1.24
NR1H3-224ENST00000487913 IQSEC2Q5JU85 1478 aa22.8■■□□□ 1.24
NR1H3-224ENST00000487913 AFAP1Q8N556 730 aa22.79■■□□□ 1.24
NR1H3-224ENST00000487913 ZNF518AQ6AHZ1 1483 aa22.78■■□□□ 1.24
NR1H3-224ENST00000487913 SETD1BQ9UPS6 1966 aaKnown RBP22.76■■□□□ 1.23
NR1H3-224ENST00000487913 C3P01024 1663 aa22.76■■□□□ 1.23
NR1H3-224ENST00000487913 KDM5CP41229 1560 aa22.76■■□□□ 1.23
NR1H3-224ENST00000487913 NCOA1Q15788 1441 aa22.75■■□□□ 1.23
NR1H3-224ENST00000487913 DIP2CQ9Y2E4 1556 aa22.75■■□□□ 1.23
NR1H3-224ENST00000487913 MYO5CQ9NQX4 1742 aa22.74■■□□□ 1.23
NR1H3-224ENST00000487913 TRAPPC8Q9Y2L5 1435 aa22.74■■□□□ 1.23
NR1H3-224ENST00000487913 MYT1LQ9UL68 1186 aa22.73■■□□□ 1.23
NR1H3-224ENST00000487913 REREQ9P2R6 1566 aa22.72■■□□□ 1.23
NR1H3-224ENST00000487913 KIF14Q15058 1648 aa22.7■■□□□ 1.22
NR1H3-224ENST00000487913 ABCA6Q8N139 1617 aa22.69■■□□□ 1.22
NR1H3-224ENST00000487913 ARHGAP5Q13017 1502 aa22.68■■□□□ 1.22
NR1H3-224ENST00000487913 UBAP1LF5GYI3 381 aa22.68■■□□□ 1.22
NR1H3-224ENST00000487913 ESF1Q9H501 851 aaKnown RBP22.68■■□□□ 1.22
NR1H3-224ENST00000487913 ATP1B4Q9UN42 357 aaPredicted RBP22.67■■□□□ 1.22
NR1H3-224ENST00000487913 ZNF335Q9H4Z2 1342 aaPredicted RBP22.66■■□□□ 1.22
NR1H3-224ENST00000487913 AGLP35573 1532 aa22.65■■□□□ 1.22
NR1H3-224ENST00000487913 MLH3Q9UHC1 1453 aa22.65■■□□□ 1.22
NR1H3-224ENST00000487913 CAMSAP1Q5T5Y3 1602 aa22.64■■□□□ 1.22
NR1H3-224ENST00000487913 NCKAP5LQ9HCH0 1330 aa22.63■■□□□ 1.21
NR1H3-224ENST00000487913 CDK11AQ9UQ88 783 aaPredicted RBP22.61■■□□□ 1.21
NR1H3-224ENST00000487913 TROQ12816 1431 aaPredicted RBP22.6■■□□□ 1.21
NR1H3-224ENST00000487913 CNTLNQ9NXG0 1405 aa22.6■■□□□ 1.21
NR1H3-224ENST00000487913 EEA1Q15075 1411 aa22.59■■□□□ 1.21
NR1H3-224ENST00000487913 NPATQ14207 1427 aa22.57■■□□□ 1.2
NR1H3-224ENST00000487913 FMN1Q68DA7 1419 aa22.56■■□□□ 1.2
NR1H3-224ENST00000487913 ABCC1P33527 1531 aa22.54■■□□□ 1.2
NR1H3-224ENST00000487913 CLIP1P30622 1438 aa22.53■■□□□ 1.2
NR1H3-224ENST00000487913 CDC42BPBQ9Y5S2 1711 aa22.53■■□□□ 1.2
NR1H3-224ENST00000487913 ZMYM3Q14202 1370 aa22.52■■□□□ 1.2
NR1H3-224ENST00000487913 MED1Q15648 1581 aaPredicted RBP22.52■■□□□ 1.2
NR1H3-224ENST00000487913 KIDINS220Q9ULH0 1771 aa22.51■■□□□ 1.19
NR1H3-224ENST00000487913 HSPA1LP34931 641 aa22.51■■□□□ 1.19
NR1H3-224ENST00000487913 PKD2Q13563 968 aa22.5■■□□□ 1.19
NR1H3-224ENST00000487913 MROH2AA6NES4 1674 aa22.49■■□□□ 1.19
NR1H3-224ENST00000487913 PLA2R1Q13018 1463 aa22.49■■□□□ 1.19
NR1H3-224ENST00000487913 ITSN2Q9NZM3 1697 aa22.49■■□□□ 1.19
NR1H3-224ENST00000487913 TCOF1Q13428 1488 aaKnown RBP22.48■■□□□ 1.19
NR1H3-224ENST00000487913 ARHGAP35Q9NRY4 1499 aa22.48■■□□□ 1.19
NR1H3-224ENST00000487913 PREX2Q70Z35 1606 aa22.47■■□□□ 1.19
NR1H3-224ENST00000487913 SCAF1Q9H7N4 1312 aaKnown RBP22.47■■□□□ 1.19
NR1H3-224ENST00000487913 MYO3AQ8NEV4 1616 aa22.46■■□□□ 1.19
NR1H3-224ENST00000487913 PIP4K2BP78356 416 aa22.45■■□□□ 1.18
NR1H3-224ENST00000487913 EHMT2Q96KQ7 1210 aa22.45■■□□□ 1.18
NR1H3-224ENST00000487913 ZNF142P52746 1687 aaPredicted RBP22.44■■□□□ 1.18
NR1H3-224ENST00000487913 PPP6R1Q9UPN7 881 aa22.44■■□□□ 1.18
NR1H3-224ENST00000487913 CEP170BQ9Y4F5 1589 aaPredicted RBP22.44■■□□□ 1.18
NR1H3-224ENST00000487913 LRRIQ1Q96JM4 1722 aa22.43■■□□□ 1.18
NR1H3-224ENST00000487913 PTPRKQ15262 1439 aa22.42■■□□□ 1.18
NR1H3-224ENST00000487913 SAMD9LQ8IVG5 1584 aa22.42■■□□□ 1.18
NR1H3-224ENST00000487913 UBTFP17480 764 aaKnown RBP22.4■■□□□ 1.18
NR1H3-224ENST00000487913 CLTCQ00610 1675 aaKnown RBP22.39■■□□□ 1.18
NR1H3-224ENST00000487913 SUPT6HQ7KZ85 1726 aaKnown RBP22.37■■□□□ 1.17
NR1H3-224ENST00000487913 SPAG9O60271 1321 aaKnown RBP22.36■■□□□ 1.17
NR1H3-224ENST00000487913 TOM1O60784 492 aa22.36■■□□□ 1.17
NR1H3-224ENST00000487913 ZNF777Q9ULD5 760 aaPredicted RBP22.35■■□□□ 1.17
NR1H3-224ENST00000487913 PHF23Q9BUL5 403 aaPredicted RBP22.34■■□□□ 1.17
NR1H3-224ENST00000487913 SYCP2Q9BX26 1530 aa22.34■■□□□ 1.17
NR1H3-224ENST00000487913 CDC42BPAQ5VT25 1732 aa22.34■■□□□ 1.17
NR1H3-224ENST00000487913 PLXNC1O60486 1568 aa22.33■■□□□ 1.16
NR1H3-224ENST00000487913 HNRNPMP52272 730 aaKnown RBP eCLIP22.32■■□□□ 1.16
NR1H3-224ENST00000487913 GGT6Q6P531 493 aa22.32■■□□□ 1.16
NR1H3-224ENST00000487913 CPS1P31327 1500 aa22.31■■□□□ 1.16
NR1H3-224ENST00000487913 A2ML1A8K2U0 1454 aa22.31■■□□□ 1.16
NR1H3-224ENST00000487913 A2MP01023 1474 aa22.31■■□□□ 1.16
NR1H3-224ENST00000487913 ATP7AQ04656 1500 aa22.31■■□□□ 1.16
NR1H3-224ENST00000487913 SHANK2Q9UPX8 1470 aa22.3■■□□□ 1.16
NR1H3-224ENST00000487913 DNMT1P26358 1616 aaKnown RBP22.29■■□□□ 1.16
NR1H3-224ENST00000487913 NEURL4Q96JN8 1562 aa22.28■■□□□ 1.16
NR1H3-224ENST00000487913 CCDC18Q5T9S5 1454 aa22.28■■□□□ 1.16
NR1H3-224ENST00000487913 INO80Q9ULG1 1556 aaPredicted RBP22.26■■□□□ 1.15
NR1H3-224ENST00000487913 CASKIN1Q8WXD9 1431 aa22.26■■□□□ 1.15
NR1H3-224ENST00000487913 ALKQ9UM73 1620 aa22.26■■□□□ 1.15
NR1H3-224ENST00000487913 GPATCH8Q9UKJ3 1502 aaKnown RBP22.26■■□□□ 1.15
NR1H3-224ENST00000487913 SENP3Q9H4L4 574 aaPredicted RBP22.22■■□□□ 1.15
NR1H3-224ENST00000487913 KIAA1107Q9UPP5 1409 aa22.22■■□□□ 1.15
NR1H3-224ENST00000487913 VWDEQ8N2E2 1590 aa22.21■■□□□ 1.15
NR1H3-224ENST00000487913 POLR1AO95602 1720 aaPredicted RBP22.21■■□□□ 1.15
NR1H3-224ENST00000487913 FBXO31Q5XUX0 539 aaPredicted RBP22.2■■□□□ 1.14
NR1H3-224ENST00000487913 TNRQ92752 1358 aa22.18■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms