RNA–Protein interactions for RNA: ENST00000487673.5

PTK7-215, Transcript of protein tyrosine kinase 7 (inactive), humanhuman

TSL 2

Gene PTK7, Length 5,282 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTK7-215ENST00000487673 SAFB2Q14151 953 aaKnown RBP eCLIP18.71■□□□□ 0.59
PTK7-215ENST00000487673 HDGFL2Q7Z4V5 671 aaPredicted RBP18.7■□□□□ 0.58
PTK7-215ENST00000487673 STK26Q9P289 416 aa18.7■□□□□ 0.58
PTK7-215ENST00000487673 U2SURPO15042 1029 aaKnown RBP18.69■□□□□ 0.58
PTK7-215ENST00000487673 MORC1Q86VD1 984 aa18.69■□□□□ 0.58
PTK7-215ENST00000487673 HMGXB3Q12766 1538 aa18.68■□□□□ 0.58
PTK7-215ENST00000487673 ROCK2O75116 1388 aaKnown RBP18.68■□□□□ 0.58
PTK7-215ENST00000487673 AQRO60306 1485 aaKnown RBP eCLIP18.67■□□□□ 0.582e-6■■■■■ 31
PTK7-215ENST00000487673 GRIN2BQ13224 1484 aa18.67■□□□□ 0.58
PTK7-215ENST00000487673 EIF3AQ14152 1382 aaKnown RBP18.66■□□□□ 0.58
PTK7-215ENST00000487673 EID1Q9Y6B2 187 aa18.66■□□□□ 0.58
PTK7-215ENST00000487673 GLIPR1L2Q4G1C9 344 aa18.66■□□□□ 0.58
PTK7-215ENST00000487673 FTSJ3Q8IY81 847 aaKnown RBP18.65■□□□□ 0.58
PTK7-215ENST00000487673 LAS1LQ9Y4W2 734 aaKnown RBP18.65■□□□□ 0.58
PTK7-215ENST00000487673 CHMP4BQ9H444 224 aaKnown RBP18.64■□□□□ 0.57
PTK7-215ENST00000487673 CC2D2AQ9P2K1 1620 aa18.63■□□□□ 0.57
PTK7-215ENST00000487673 MRC2Q9UBG0 1479 aa18.63■□□□□ 0.57
PTK7-215ENST00000487673 MS4A1P11836 297 aa18.63■□□□□ 0.57
PTK7-215ENST00000487673 CCER2I3L3R5 266 aa18.62■□□□□ 0.57
PTK7-215ENST00000487673 SUPT16HQ9Y5B9 1047 aaKnown RBP18.62■□□□□ 0.57
PTK7-215ENST00000487673 L3MBTL2Q969R5 705 aa18.61■□□□□ 0.57
PTK7-215ENST00000487673 KTN1Q86UP2 1357 aaKnown RBP18.6■□□□□ 0.57
PTK7-215ENST00000487673 ARXQ96QS3 562 aa18.6■□□□□ 0.57
PTK7-215ENST00000487673 SOX12O15370 315 aa18.6■□□□□ 0.57
PTK7-215ENST00000487673 IFT140Q96RY7 1462 aa18.58■□□□□ 0.56
PTK7-215ENST00000487673 ANP32BQ92688 251 aaKnown RBP18.58■□□□□ 0.56
PTK7-215ENST00000487673 EIF5BO60841 1220 aaKnown RBP18.57■□□□□ 0.56
PTK7-215ENST00000487673 MYOM3Q5VTT5 1437 aa18.56■□□□□ 0.56
PTK7-215ENST00000487673 NESP48681 1621 aa18.55■□□□□ 0.56
PTK7-215ENST00000487673 CCDC144AA2RUR9 1427 aa18.55■□□□□ 0.56
PTK7-215ENST00000487673 UACAQ9BZF9 1416 aa18.55■□□□□ 0.56
PTK7-215ENST00000487673 RALBP1Q15311 655 aa18.55■□□□□ 0.56
PTK7-215ENST00000487673 TERF2IPQ9NYB0 399 aa18.54■□□□□ 0.56
PTK7-215ENST00000487673 FRAT1Q92837 279 aaPredicted RBP18.52■□□□□ 0.56
PTK7-215ENST00000487673 ERICH3Q5RHP9 1530 aa18.5■□□□□ 0.55
PTK7-215ENST00000487673 TOPBP1Q92547 1522 aa18.5■□□□□ 0.55
PTK7-215ENST00000487673 CUX1P39880 1505 aa18.5■□□□□ 0.55
PTK7-215ENST00000487673 VGFO15240 615 aaPredicted RBP18.5■□□□□ 0.55
PTK7-215ENST00000487673 FAM69CQ0P6D2 419 aa18.49■□□□□ 0.55
PTK7-215ENST00000487673 RTF1Q92541 710 aaKnown RBP18.49■□□□□ 0.55
PTK7-215ENST00000487673 PAK3O75914 559 aaPredicted RBP18.49■□□□□ 0.55
PTK7-215ENST00000487673 CASKIN1Q8WXD9 1431 aa18.48■□□□□ 0.55
PTK7-215ENST00000487673 CASC1Q6TDU7 716 aa18.47■□□□□ 0.55
PTK7-215ENST00000487673 NUTM2DQ5VT03 806 aaPredicted RBP18.47■□□□□ 0.55
PTK7-215ENST00000487673 BECN1Q14457 450 aa18.47■□□□□ 0.55
PTK7-215ENST00000487673 CALD1Q05682 793 aaKnown RBP18.46■□□□□ 0.55
PTK7-215ENST00000487673 FGD6Q6ZV73 1430 aa18.46■□□□□ 0.55
PTK7-215ENST00000487673 PPP4R2Q9NY27 417 aa18.45■□□□□ 0.54
PTK7-215ENST00000487673 KIF21BO75037 1637 aa18.45■□□□□ 0.54
PTK7-215ENST00000487673 SYNJ1O43426 1573 aa18.45■□□□□ 0.54
PTK7-215ENST00000487673 DDRGK1Q96HY6 314 aa18.44■□□□□ 0.54
PTK7-215ENST00000487673 POLA1P09884 1462 aaPredicted RBP18.44■□□□□ 0.54
PTK7-215ENST00000487673 DHX57Q6P158 1386 aaKnown RBP18.44■□□□□ 0.54
PTK7-215ENST00000487673 U2AF1L5P0DN76 240 aaPredicted RBP18.44■□□□□ 0.54
PTK7-215ENST00000487673 U2AF1Q01081 240 aaKnown RBP eCLIP18.44■□□□□ 0.54
PTK7-215ENST00000487673 PRG4Q92954 1404 aaPredicted RBP18.44■□□□□ 0.54
PTK7-215ENST00000487673 SYNJ2O15056 1496 aa18.43■□□□□ 0.54
PTK7-215ENST00000487673 NBR1Q14596 966 aa18.43■□□□□ 0.54
PTK7-215ENST00000487673 NGDNQ8NEJ9 315 aaKnown RBP18.42■□□□□ 0.54
PTK7-215ENST00000487673 TOP2BQ02880 1626 aa18.42■□□□□ 0.54
PTK7-215ENST00000487673 CHMP4AQ9BY43 222 aa18.42■□□□□ 0.54
PTK7-215ENST00000487673 NPHP1O15259 732 aa18.41■□□□□ 0.54
PTK7-215ENST00000487673 TRAK1Q9UPV9 953 aa18.41■□□□□ 0.54
PTK7-215ENST00000487673 FYCO1Q9BQS8 1478 aa18.41■□□□□ 0.54
PTK7-215ENST00000487673 LRRC9Q6ZRR7 1453 aa18.4■□□□□ 0.54
PTK7-215ENST00000487673 CSB-PGBD3P0DP91 1061 aa18.4■□□□□ 0.54
PTK7-215ENST00000487673 STAC3Q96MF2 364 aa18.4■□□□□ 0.54
PTK7-215ENST00000487673 KIF15Q9NS87 1388 aa18.4■□□□□ 0.54
PTK7-215ENST00000487673 DNMBPQ6XZF7 1577 aa18.4■□□□□ 0.54
PTK7-215ENST00000487673 BICRAQ9NZM4 1560 aa18.39■□□□□ 0.53
PTK7-215ENST00000487673 PRDM2Q13029 1718 aa18.39■□□□□ 0.53
PTK7-215ENST00000487673 EFCAB5A4FU69 1503 aa18.38■□□□□ 0.53
PTK7-215ENST00000487673 OS9Q13438 667 aaPredicted RBP18.37■□□□□ 0.53
PTK7-215ENST00000487673 RGS3P49796 1198 aa18.37■□□□□ 0.53
PTK7-215ENST00000487673 IPO8O15397 1037 aaKnown RBP18.37■□□□□ 0.53
PTK7-215ENST00000487673 NLRP13Q86W25 1043 aa18.37■□□□□ 0.53
PTK7-215ENST00000487673 PRXQ9BXM0 1461 aa18.37■□□□□ 0.53
PTK7-215ENST00000487673 ZNF644Q9H582 1327 aaPredicted RBP18.36■□□□□ 0.53
PTK7-215ENST00000487673 NCOA2Q15596 1464 aa18.35■□□□□ 0.53
PTK7-215ENST00000487673 ST20-MTHFSA0A0A6YYL1 179 aa18.35■□□□□ 0.53
PTK7-215ENST00000487673 LAMC3Q9Y6N6 1575 aa18.34■□□□□ 0.53
PTK7-215ENST00000487673 PHLDB1Q86UU1 1377 aa18.34■□□□□ 0.53
PTK7-215ENST00000487673 SNAPC4Q5SXM2 1469 aa18.33■□□□□ 0.53
PTK7-215ENST00000487673 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.33■□□□□ 0.53
PTK7-215ENST00000487673 EVC2Q86UK5 1308 aa18.33■□□□□ 0.52
PTK7-215ENST00000487673 ANKRD50Q9ULJ7 1429 aa18.32■□□□□ 0.52
PTK7-215ENST00000487673 ANP32EQ9BTT0 268 aa18.31■□□□□ 0.52
PTK7-215ENST00000487673 B4GALNT3Q6L9W6 998 aa18.3■□□□□ 0.52
PTK7-215ENST00000487673 NCLP19338 710 aaKnown RBP18.3■□□□□ 0.52
PTK7-215ENST00000487673 AMPHP49418 695 aa18.29■□□□□ 0.52
PTK7-215ENST00000487673 ARHGAP5Q13017 1502 aa18.29■□□□□ 0.52
PTK7-215ENST00000487673 ARAP1Q96P48 1450 aa18.29■□□□□ 0.52
PTK7-215ENST00000487673 GOLGA6L22H0YM25 854 aa18.29■□□□□ 0.52
PTK7-215ENST00000487673 NUTM2FA1L443 756 aa18.29■□□□□ 0.52
PTK7-215ENST00000487673 LMOD3Q0VAK6 560 aa18.29■□□□□ 0.52
PTK7-215ENST00000487673 PLEKHH2Q8IVE3 1493 aa18.26■□□□□ 0.51
PTK7-215ENST00000487673 USP47Q96K76 1375 aa18.26■□□□□ 0.51
PTK7-215ENST00000487673 ABCA10Q8WWZ4 1543 aa18.26■□□□□ 0.51
PTK7-215ENST00000487673 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.25■□□□□ 0.51
PTK7-215ENST00000487673 AFAP1Q8N556 730 aa18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms