RNA–Protein interactions for RNA: ENST00000487633.1

COL4A3-206, Transcript of collagen type IV alpha 3 chain, humanhuman

TSL 3

Gene COL4A3, Length 524 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3-206ENST00000487633 GOLGA3Q08378 1498 aa10.47□□□□□ -0.73
COL4A3-206ENST00000487633 EFCAB5A4FU69 1503 aa10.47□□□□□ -0.73
COL4A3-206ENST00000487633 DMRT2Q9Y5R5 561 aa10.46□□□□□ -0.73
COL4A3-206ENST00000487633 UHRF1BP1Q6BDS2 1440 aa10.46□□□□□ -0.74
COL4A3-206ENST00000487633 IQSEC2Q5JU85 1478 aa10.46□□□□□ -0.74
COL4A3-206ENST00000487633 NUP153P49790 1475 aaKnown RBP10.45□□□□□ -0.74
COL4A3-206ENST00000487633 UBAP1LF5GYI3 381 aa10.45□□□□□ -0.74
COL4A3-206ENST00000487633 HSPA1LP34931 641 aa10.45□□□□□ -0.74
COL4A3-206ENST00000487633 NCOA1Q15788 1441 aa10.43□□□□□ -0.74
COL4A3-206ENST00000487633 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.42□□□□□ -0.74
COL4A3-206ENST00000487633 HNRNPUL2Q1KMD3 747 aaKnown RBP10.42□□□□□ -0.74
COL4A3-206ENST00000487633 ATP10AO60312 1499 aa10.42□□□□□ -0.74
COL4A3-206ENST00000487633 CAMSAP1Q5T5Y3 1602 aa10.41□□□□□ -0.74
COL4A3-206ENST00000487633 NCKAP5LQ9HCH0 1330 aa10.41□□□□□ -0.74
COL4A3-206ENST00000487633 SAMD9Q5K651 1589 aa10.41□□□□□ -0.74
COL4A3-206ENST00000487633 C9orf84Q5VXU9 1444 aa10.41□□□□□ -0.74
COL4A3-206ENST00000487633 CFAP74Q9C0B2 1584 aa10.4□□□□□ -0.74
COL4A3-206ENST00000487633 MAGI2Q86UL8 1455 aa10.4□□□□□ -0.74
COL4A3-206ENST00000487633 SCAPERQ9BY12 1400 aa10.4□□□□□ -0.75
COL4A3-206ENST00000487633 ALKQ9UM73 1620 aa10.4□□□□□ -0.75
COL4A3-206ENST00000487633 PIP4K2BP78356 416 aa10.37□□□□□ -0.75
COL4A3-206ENST00000487633 RGS17Q9UGC6 210 aaPredicted RBP10.37□□□□□ -0.75
COL4A3-206ENST00000487633 DIP2CQ9Y2E4 1556 aa10.37□□□□□ -0.75
COL4A3-206ENST00000487633 ABCA6Q8N139 1617 aa10.36□□□□□ -0.75
COL4A3-206ENST00000487633 PRXQ9BXM0 1461 aa10.36□□□□□ -0.75
COL4A3-206ENST00000487633 SCAF1Q9H7N4 1312 aaKnown RBP10.34□□□□□ -0.75
COL4A3-206ENST00000487633 CDK13Q14004 1512 aaKnown RBP10.34□□□□□ -0.75
COL4A3-206ENST00000487633 AFAP1Q8N556 730 aa10.34□□□□□ -0.75
COL4A3-206ENST00000487633 SENP3Q9H4L4 574 aaPredicted RBP10.34□□□□□ -0.75
COL4A3-206ENST00000487633 TRAPPC8Q9Y2L5 1435 aa10.33□□□□□ -0.76
COL4A3-206ENST00000487633 SUPT6HQ7KZ85 1726 aaKnown RBP10.33□□□□□ -0.76
COL4A3-206ENST00000487633 PLCH2O75038 1416 aa10.33□□□□□ -0.76
COL4A3-206ENST00000487633 RANGAP1P46060 587 aaPredicted RBP10.32□□□□□ -0.76
COL4A3-206ENST00000487633 SETD1AO15047 1707 aaKnown RBP10.32□□□□□ -0.76
COL4A3-206ENST00000487633 KDM5CP41229 1560 aa10.31□□□□□ -0.76
COL4A3-206ENST00000487633 PLEKHD1A6NEE1 506 aa10.31□□□□□ -0.76
COL4A3-206ENST00000487633 KIF14Q15058 1648 aa10.31□□□□□ -0.76
COL4A3-206ENST00000487633 MYO5CQ9NQX4 1742 aa10.3□□□□□ -0.76
COL4A3-206ENST00000487633 PHF23Q9BUL5 403 aaPredicted RBP10.3□□□□□ -0.76
COL4A3-206ENST00000487633 MYO3AQ8NEV4 1616 aa10.29□□□□□ -0.76
COL4A3-206ENST00000487633 TCOF1Q13428 1488 aaKnown RBP10.29□□□□□ -0.76
COL4A3-206ENST00000487633 ZNF142P52746 1687 aaPredicted RBP10.28□□□□□ -0.76
COL4A3-206ENST00000487633 REREQ9P2R6 1566 aa10.28□□□□□ -0.76
COL4A3-206ENST00000487633 STRCP1A6NGW2 1772 aa10.27□□□□□ -0.77
COL4A3-206ENST00000487633 KIDINS220Q9ULH0 1771 aa10.27□□□□□ -0.77
COL4A3-206ENST00000487633 CDC42BPBQ9Y5S2 1711 aa10.27□□□□□ -0.77
COL4A3-206ENST00000487633 NEURL4Q96JN8 1562 aa10.26□□□□□ -0.77
COL4A3-206ENST00000487633 CLTCQ00610 1675 aaKnown RBP10.26□□□□□ -0.77
COL4A3-206ENST00000487633 AGLP35573 1532 aa10.26□□□□□ -0.77
COL4A3-206ENST00000487633 CEP170BQ9Y4F5 1589 aaPredicted RBP10.26□□□□□ -0.77
COL4A3-206ENST00000487633 ZNF518AQ6AHZ1 1483 aa10.25□□□□□ -0.77
COL4A3-206ENST00000487633 POTEAQ6S8J7 498 aa10.25□□□□□ -0.77
COL4A3-206ENST00000487633 MROH2AA6NES4 1674 aa10.25□□□□□ -0.77
COL4A3-206ENST00000487633 LRRIQ1Q96JM4 1722 aa10.24□□□□□ -0.77
COL4A3-206ENST00000487633 PLA2R1Q13018 1463 aa10.23□□□□□ -0.77
COL4A3-206ENST00000487633 ZMYM3Q14202 1370 aa10.23□□□□□ -0.77
COL4A3-206ENST00000487633 VWDEQ8N2E2 1590 aa10.22□□□□□ -0.77
COL4A3-206ENST00000487633 DNMT1P26358 1616 aaKnown RBP10.22□□□□□ -0.77
COL4A3-206ENST00000487633 ITSN2Q9NZM3 1697 aa10.22□□□□□ -0.77
COL4A3-206ENST00000487633 POLR1AO95602 1720 aaPredicted RBP10.22□□□□□ -0.77
COL4A3-206ENST00000487633 MYT1LQ9UL68 1186 aa10.22□□□□□ -0.77
COL4A3-206ENST00000487633 PPP6R1Q9UPN7 881 aa10.22□□□□□ -0.77
COL4A3-206ENST00000487633 NPATQ14207 1427 aa10.22□□□□□ -0.77
COL4A3-206ENST00000487633 MLH3Q9UHC1 1453 aa10.22□□□□□ -0.77
COL4A3-206ENST00000487633 EFCAB2Q5VUJ9 269 aa10.21□□□□□ -0.77
COL4A3-206ENST00000487633 PTPRKQ15262 1439 aa10.21□□□□□ -0.78
COL4A3-206ENST00000487633 SHANK2Q9UPX8 1470 aa10.21□□□□□ -0.78
COL4A3-206ENST00000487633 ARHGAP5Q13017 1502 aa10.21□□□□□ -0.78
COL4A3-206ENST00000487633 TOM1O60784 492 aa10.2□□□□□ -0.78
COL4A3-206ENST00000487633 PKD2Q13563 968 aa10.2□□□□□ -0.78
COL4A3-206ENST00000487633 CPS1P31327 1500 aa10.18□□□□□ -0.78
COL4A3-206ENST00000487633 ABCC1P33527 1531 aa10.18□□□□□ -0.78
COL4A3-206ENST00000487633 ESF1Q9H501 851 aaKnown RBP10.18□□□□□ -0.78
COL4A3-206ENST00000487633 CNTLNQ9NXG0 1405 aa10.17□□□□□ -0.78
COL4A3-206ENST00000487633 XIRP1Q702N8 1843 aaKnown RBP10.17□□□□□ -0.78
COL4A3-206ENST00000487633 FAM9AQ8IZU1 332 aaPredicted RBP10.17□□□□□ -0.78
COL4A3-206ENST00000487633 PREX2Q70Z35 1606 aa10.15□□□□□ -0.79
COL4A3-206ENST00000487633 SAMD9LQ8IVG5 1584 aa10.14□□□□□ -0.79
COL4A3-206ENST00000487633 LRRC7Q96NW7 1537 aa10.14□□□□□ -0.79
COL4A3-206ENST00000487633 SRCAPQ6ZRS2 3230 aa10.14□□□□□ -0.79
COL4A3-206ENST00000487633 CDC42BPAQ5VT25 1732 aa10.13□□□□□ -0.79
COL4A3-206ENST00000487633 A2ML1A8K2U0 1454 aa10.13□□□□□ -0.79
COL4A3-206ENST00000487633 FBXO31Q5XUX0 539 aaPredicted RBP10.12□□□□□ -0.79
COL4A3-206ENST00000487633 PLXNC1O60486 1568 aa10.12□□□□□ -0.79
COL4A3-206ENST00000487633 RNF17Q9BXT8 1623 aaKnown RBP10.11□□□□□ -0.79
COL4A3-206ENST00000487633 ATP1B4Q9UN42 357 aaPredicted RBP10.11□□□□□ -0.79
COL4A3-206ENST00000487633 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.11□□□□□ -0.79
COL4A3-206ENST00000487633 TROQ12816 1431 aaPredicted RBP10.1□□□□□ -0.79
COL4A3-206ENST00000487633 GGT6Q6P531 493 aa10.09□□□□□ -0.79
COL4A3-206ENST00000487633 CSRNP3Q8WYN3 585 aa10.09□□□□□ -0.79
COL4A3-206ENST00000487633 UPF1Q92900 1129 aaKnown RBP eCLIP10.09□□□□□ -0.79
COL4A3-206ENST00000487633 IQGAP1P46940 1657 aa10.09□□□□□ -0.79
COL4A3-206ENST00000487633 SYCP2Q9BX26 1530 aa10.08□□□□□ -0.8
COL4A3-206ENST00000487633 ZC3H13Q5T200 1668 aaKnown RBP10.08□□□□□ -0.8
COL4A3-206ENST00000487633 INO80Q9ULG1 1556 aaPredicted RBP10.07□□□□□ -0.8
COL4A3-206ENST00000487633 NPHP4O75161 1426 aaPredicted RBP10.07□□□□□ -0.8
COL4A3-206ENST00000487633 HNRNPMP52272 730 aaKnown RBP eCLIP10.06□□□□□ -0.8
COL4A3-206ENST00000487633 ATP7AQ04656 1500 aa10.06□□□□□ -0.8
COL4A3-206ENST00000487633 MED14O60244 1454 aa10.05□□□□□ -0.8
COL4A3-206ENST00000487633 A2MP01023 1474 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms