RNA–Protein interactions for RNA: ENST00000487462.1

CDK11A-217, Transcript of cyclin dependent kinase 11A, humanhuman

TSL 5

Gene CDK11A, Length 437 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11A-217ENST00000487462 PREX1Q8TCU6 1659 aa16.94■□□□□ 0.3
CDK11A-217ENST00000487462 RICTORQ6R327 1708 aa16.93■□□□□ 0.3
CDK11A-217ENST00000487462 MYCNP04198 464 aaPredicted RBP16.93■□□□□ 0.3
CDK11A-217ENST00000487462 RAPGEF2Q9Y4G8 1499 aa16.93■□□□□ 0.3
CDK11A-217ENST00000487462 CTTNBP2Q8WZ74 1663 aa16.91■□□□□ 0.3
CDK11A-217ENST00000487462 YEATS2Q9ULM3 1422 aa16.91■□□□□ 0.3
CDK11A-217ENST00000487462 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.9■□□□□ 0.3
CDK11A-217ENST00000487462 HNRNPUL2Q1KMD3 747 aaKnown RBP16.9■□□□□ 0.3
CDK11A-217ENST00000487462 U3KPZ7 1027 aaPredicted RBP16.9■□□□□ 0.3
CDK11A-217ENST00000487462 FANCAO15360 1455 aa16.89■□□□□ 0.29
CDK11A-217ENST00000487462 ATP10BO94823 1461 aa16.88■□□□□ 0.29
CDK11A-217ENST00000487462 CSRNP3Q8WYN3 585 aa16.88■□□□□ 0.29
CDK11A-217ENST00000487462 POGZQ7Z3K3 1410 aa16.87■□□□□ 0.29
CDK11A-217ENST00000487462 GOLGA3Q08378 1498 aa16.87■□□□□ 0.29
CDK11A-217ENST00000487462 LTBP4Q8N2S1 1624 aa16.85■□□□□ 0.29
CDK11A-217ENST00000487462 ZMYM4Q5VZL5 1548 aa16.85■□□□□ 0.29
CDK11A-217ENST00000487462 ARID3CA6NKF2 412 aa16.84■□□□□ 0.29
CDK11A-217ENST00000487462 C1QBPQ07021 282 aaKnown RBP16.83■□□□□ 0.28
CDK11A-217ENST00000487462 FHOD3Q2V2M9 1422 aa16.83■□□□□ 0.28
CDK11A-217ENST00000487462 AKNAQ7Z591 1439 aa16.83■□□□□ 0.28
CDK11A-217ENST00000487462 DENND4BO75064 1496 aaPredicted RBP16.82■□□□□ 0.28
CDK11A-217ENST00000487462 IQSEC2Q5JU85 1478 aa16.82■□□□□ 0.28
CDK11A-217ENST00000487462 ZFYVE16Q7Z3T8 1539 aa16.81■□□□□ 0.28
CDK11A-217ENST00000487462 ARHGEF12Q9NZN5 1544 aa16.8■□□□□ 0.28
CDK11A-217ENST00000487462 EFCAB5A4FU69 1503 aa16.8■□□□□ 0.28
CDK11A-217ENST00000487462 PTPRTO14522 1441 aa16.79■□□□□ 0.28
CDK11A-217ENST00000487462 APLP2Q06481 763 aa16.78■□□□□ 0.28
CDK11A-217ENST00000487462 SAMD1Q6SPF0 538 aaPredicted RBP16.78■□□□□ 0.28
CDK11A-217ENST00000487462 MLECQ14165 292 aa16.77■□□□□ 0.28
CDK11A-217ENST00000487462 CFAP74Q9C0B2 1584 aa16.75■□□□□ 0.27
CDK11A-217ENST00000487462 SETD1BQ9UPS6 1966 aaKnown RBP16.74■□□□□ 0.27
CDK11A-217ENST00000487462 HECW1Q76N89 1606 aa16.74■□□□□ 0.27
CDK11A-217ENST00000487462 MAGI2Q86UL8 1455 aa16.73■□□□□ 0.27
CDK11A-217ENST00000487462 UHRF1BP1Q6BDS2 1440 aa16.73■□□□□ 0.27
CDK11A-217ENST00000487462 CEBPAP49715 358 aaPredicted RBP16.73■□□□□ 0.27
CDK11A-217ENST00000487462 MED1Q15648 1581 aaPredicted RBP16.71■□□□□ 0.27
CDK11A-217ENST00000487462 RAPGEF6Q8TEU7 1601 aa16.7■□□□□ 0.26
CDK11A-217ENST00000487462 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.65■□□□□ 0.26
CDK11A-217ENST00000487462 C9orf84Q5VXU9 1444 aa16.65■□□□□ 0.26
CDK11A-217ENST00000487462 NUP153P49790 1475 aaKnown RBP16.65■□□□□ 0.26
CDK11A-217ENST00000487462 C3P01024 1663 aa16.65■□□□□ 0.26
CDK11A-217ENST00000487462 NCOA1Q15788 1441 aa16.64■□□□□ 0.25
CDK11A-217ENST00000487462 ATP10AO60312 1499 aa16.64■□□□□ 0.25
CDK11A-217ENST00000487462 P3H3Q8IVL6 736 aa16.62■□□□□ 0.25
CDK11A-217ENST00000487462 SAMD9Q5K651 1589 aa16.62■□□□□ 0.25
CDK11A-217ENST00000487462 UBAP1LF5GYI3 381 aa16.61■□□□□ 0.25
CDK11A-217ENST00000487462 CACNB1Q02641 598 aaPredicted RBP16.61■□□□□ 0.25
CDK11A-217ENST00000487462 SCAPERQ9BY12 1400 aa16.57■□□□□ 0.24
CDK11A-217ENST00000487462 ATXN8OSP0DMR3 200 aa16.57■□□□□ 0.24
CDK11A-217ENST00000487462 PRXQ9BXM0 1461 aa16.56■□□□□ 0.24
CDK11A-217ENST00000487462 FAM9AQ8IZU1 332 aaPredicted RBP16.56■□□□□ 0.24
CDK11A-217ENST00000487462 ZNF335Q9H4Z2 1342 aaPredicted RBP16.55■□□□□ 0.24
CDK11A-217ENST00000487462 CAMSAP1Q5T5Y3 1602 aa16.55■□□□□ 0.24
CDK11A-217ENST00000487462 HSPA1LP34931 641 aa16.53■□□□□ 0.24
CDK11A-217ENST00000487462 TRAPPC8Q9Y2L5 1435 aa16.53■□□□□ 0.24
CDK11A-217ENST00000487462 REREQ9P2R6 1566 aa16.51■□□□□ 0.23
CDK11A-217ENST00000487462 DIP2CQ9Y2E4 1556 aa16.51■□□□□ 0.23
CDK11A-217ENST00000487462 PLEKHD1A6NEE1 506 aa16.5■□□□□ 0.23
CDK11A-217ENST00000487462 PLCH2O75038 1416 aa16.49■□□□□ 0.23
CDK11A-217ENST00000487462 KDM5CP41229 1560 aa16.49■□□□□ 0.23
CDK11A-217ENST00000487462 CAPN15O75808 1086 aa16.47■□□□□ 0.23
CDK11A-217ENST00000487462 ABCA6Q8N139 1617 aa16.46■□□□□ 0.23
CDK11A-217ENST00000487462 ZNF518AQ6AHZ1 1483 aa16.46■□□□□ 0.23
CDK11A-217ENST00000487462 NCKAP5LQ9HCH0 1330 aa16.45■□□□□ 0.22
CDK11A-217ENST00000487462 MYO5CQ9NQX4 1742 aa16.45■□□□□ 0.22
CDK11A-217ENST00000487462 AGLP35573 1532 aa16.45■□□□□ 0.22
CDK11A-217ENST00000487462 ZNF142P52746 1687 aaPredicted RBP16.44■□□□□ 0.22
CDK11A-217ENST00000487462 ZNF219Q9P2Y4 722 aaPredicted RBP16.44■□□□□ 0.22
CDK11A-217ENST00000487462 SUPT6HQ7KZ85 1726 aaKnown RBP16.42■□□□□ 0.22
CDK11A-217ENST00000487462 PLA2R1Q13018 1463 aa16.42■□□□□ 0.22
CDK11A-217ENST00000487462 TCOF1Q13428 1488 aaKnown RBP16.42■□□□□ 0.22
CDK11A-217ENST00000487462 MROH2AA6NES4 1674 aa16.41■□□□□ 0.22
CDK11A-217ENST00000487462 PIP4K2BP78356 416 aa16.41■□□□□ 0.22
CDK11A-217ENST00000487462 SPINK5Q9NQ38 1064 aaPredicted RBP16.41■□□□□ 0.22
CDK11A-217ENST00000487462 NPATQ14207 1427 aa16.41■□□□□ 0.22
CDK11A-217ENST00000487462 CDK13Q14004 1512 aaKnown RBP16.4■□□□□ 0.22
CDK11A-217ENST00000487462 MYO3AQ8NEV4 1616 aa16.4■□□□□ 0.22
CDK11A-217ENST00000487462 ALKQ9UM73 1620 aa16.39■□□□□ 0.21
CDK11A-217ENST00000487462 CNTLNQ9NXG0 1405 aa16.38■□□□□ 0.21
CDK11A-217ENST00000487462 AFAP1Q8N556 730 aa16.38■□□□□ 0.21
CDK11A-217ENST00000487462 PKD2Q13563 968 aa16.36■□□□□ 0.21
CDK11A-217ENST00000487462 EFCAB2Q5VUJ9 269 aa16.36■□□□□ 0.21
CDK11A-217ENST00000487462 MLH3Q9UHC1 1453 aa16.35■□□□□ 0.21
CDK11A-217ENST00000487462 CEP170BQ9Y4F5 1589 aaPredicted RBP16.35■□□□□ 0.21
CDK11A-217ENST00000487462 ESF1Q9H501 851 aaKnown RBP16.35■□□□□ 0.21
CDK11A-217ENST00000487462 KIF14Q15058 1648 aa16.34■□□□□ 0.21
CDK11A-217ENST00000487462 TOM1O60784 492 aa16.33■□□□□ 0.2
CDK11A-217ENST00000487462 CPS1P31327 1500 aa16.33■□□□□ 0.2
CDK11A-217ENST00000487462 RGS17Q9UGC6 210 aaPredicted RBP16.32■□□□□ 0.2
CDK11A-217ENST00000487462 KIDINS220Q9ULH0 1771 aa16.31■□□□□ 0.2
CDK11A-217ENST00000487462 ARHGAP5Q13017 1502 aa16.31■□□□□ 0.2
CDK11A-217ENST00000487462 ZMYM3Q14202 1370 aa16.29■□□□□ 0.2
CDK11A-217ENST00000487462 POLR1AO95602 1720 aaPredicted RBP16.29■□□□□ 0.2
CDK11A-217ENST00000487462 CDC42BPBQ9Y5S2 1711 aa16.28■□□□□ 0.2
CDK11A-217ENST00000487462 CLTCQ00610 1675 aaKnown RBP16.28■□□□□ 0.2
CDK11A-217ENST00000487462 MYT1LQ9UL68 1186 aa16.28■□□□□ 0.2
CDK11A-217ENST00000487462 ATF5Q9Y2D1 282 aaPredicted RBP16.28■□□□□ 0.2
CDK11A-217ENST00000487462 NEURL4Q96JN8 1562 aa16.28■□□□□ 0.2
CDK11A-217ENST00000487462 SHANK2Q9UPX8 1470 aa16.28■□□□□ 0.2
CDK11A-217ENST00000487462 ITSN2Q9NZM3 1697 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms