RNA–Protein interactions for RNA: ENST00000486978.5

CTDSPL-208, Transcript of CTD small phosphatase like, humanhuman

TSL 3

Gene CTDSPL, Length 609 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-208ENST00000486978 HECW1Q76N89 1606 aa11.01□□□□□ -0.65
CTDSPL-208ENST00000486978 POGZQ7Z3K3 1410 aa11.01□□□□□ -0.65
CTDSPL-208ENST00000486978 ZMYM4Q5VZL5 1548 aa11□□□□□ -0.65
CTDSPL-208ENST00000486978 SETD1BQ9UPS6 1966 aaKnown RBP11□□□□□ -0.65
CTDSPL-208ENST00000486978 GOLGA3Q08378 1498 aa10.99□□□□□ -0.65
CTDSPL-208ENST00000486978 MED1Q15648 1581 aaPredicted RBP10.99□□□□□ -0.65
CTDSPL-208ENST00000486978 IQSEC2Q5JU85 1478 aa10.98□□□□□ -0.65
CTDSPL-208ENST00000486978 EFCAB5A4FU69 1503 aa10.96□□□□□ -0.65
CTDSPL-208ENST00000486978 UBAP1LF5GYI3 381 aa10.96□□□□□ -0.65
CTDSPL-208ENST00000486978 C3P01024 1663 aa10.95□□□□□ -0.66
CTDSPL-208ENST00000486978 UHRF1BP1Q6BDS2 1440 aa10.95□□□□□ -0.66
CTDSPL-208ENST00000486978 RAPGEF6Q8TEU7 1601 aa10.95□□□□□ -0.66
CTDSPL-208ENST00000486978 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.94□□□□□ -0.66
CTDSPL-208ENST00000486978 ZNF335Q9H4Z2 1342 aaPredicted RBP10.94□□□□□ -0.66
CTDSPL-208ENST00000486978 HSPA1LP34931 641 aa10.94□□□□□ -0.66
CTDSPL-208ENST00000486978 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.93□□□□□ -0.66
CTDSPL-208ENST00000486978 HNRNPUL2Q1KMD3 747 aaKnown RBP10.93□□□□□ -0.66
CTDSPL-208ENST00000486978 ATP10AO60312 1499 aa10.93□□□□□ -0.66
CTDSPL-208ENST00000486978 NUP153P49790 1475 aaKnown RBP10.92□□□□□ -0.66
CTDSPL-208ENST00000486978 NCOA1Q15788 1441 aa10.92□□□□□ -0.66
CTDSPL-208ENST00000486978 MAGI2Q86UL8 1455 aa10.91□□□□□ -0.66
CTDSPL-208ENST00000486978 CFAP74Q9C0B2 1584 aa10.9□□□□□ -0.66
CTDSPL-208ENST00000486978 NCKAP5LQ9HCH0 1330 aa10.9□□□□□ -0.66
CTDSPL-208ENST00000486978 C9orf84Q5VXU9 1444 aa10.89□□□□□ -0.67
CTDSPL-208ENST00000486978 SCAPERQ9BY12 1400 aa10.89□□□□□ -0.67
CTDSPL-208ENST00000486978 CAMSAP1Q5T5Y3 1602 aa10.88□□□□□ -0.67
CTDSPL-208ENST00000486978 SAMD9Q5K651 1589 aa10.87□□□□□ -0.67
CTDSPL-208ENST00000486978 PIP4K2BP78356 416 aa10.85□□□□□ -0.67
CTDSPL-208ENST00000486978 PRXQ9BXM0 1461 aa10.85□□□□□ -0.67
CTDSPL-208ENST00000486978 TRAPPC8Q9Y2L5 1435 aa10.84□□□□□ -0.67
CTDSPL-208ENST00000486978 RGS17Q9UGC6 210 aaPredicted RBP10.84□□□□□ -0.67
CTDSPL-208ENST00000486978 ALKQ9UM73 1620 aa10.84□□□□□ -0.67
CTDSPL-208ENST00000486978 DIP2CQ9Y2E4 1556 aa10.83□□□□□ -0.68
CTDSPL-208ENST00000486978 PLEKHD1A6NEE1 506 aa10.83□□□□□ -0.68
CTDSPL-208ENST00000486978 SCAF1Q9H7N4 1312 aaKnown RBP10.83□□□□□ -0.68
CTDSPL-208ENST00000486978 AFAP1Q8N556 730 aa10.82□□□□□ -0.68
CTDSPL-208ENST00000486978 PLCH2O75038 1416 aa10.82□□□□□ -0.68
CTDSPL-208ENST00000486978 ABCA6Q8N139 1617 aa10.81□□□□□ -0.68
CTDSPL-208ENST00000486978 SRCAPQ6ZRS2 3230 aa10.79□□□□□ -0.68
CTDSPL-208ENST00000486978 SUPT6HQ7KZ85 1726 aaKnown RBP10.78□□□□□ -0.68
CTDSPL-208ENST00000486978 KDM5CP41229 1560 aa10.78□□□□□ -0.68
CTDSPL-208ENST00000486978 RANGAP1P46060 587 aaPredicted RBP10.78□□□□□ -0.68
CTDSPL-208ENST00000486978 CDK13Q14004 1512 aaKnown RBP10.78□□□□□ -0.68
CTDSPL-208ENST00000486978 EEA1Q15075 1411 aa10.77□□□□□ -0.68
CTDSPL-208ENST00000486978 TCOF1Q13428 1488 aaKnown RBP10.77□□□□□ -0.69
CTDSPL-208ENST00000486978 MYO5CQ9NQX4 1742 aa10.77□□□□□ -0.69
CTDSPL-208ENST00000486978 REREQ9P2R6 1566 aa10.77□□□□□ -0.69
CTDSPL-208ENST00000486978 CSRNP3Q8WYN3 585 aa10.76□□□□□ -0.69
CTDSPL-208ENST00000486978 FAM9AQ8IZU1 332 aaPredicted RBP10.75□□□□□ -0.69
CTDSPL-208ENST00000486978 KIF14Q15058 1648 aa10.75□□□□□ -0.69
CTDSPL-208ENST00000486978 ZNF142P52746 1687 aaPredicted RBP10.75□□□□□ -0.69
CTDSPL-208ENST00000486978 AGLP35573 1532 aa10.74□□□□□ -0.69
CTDSPL-208ENST00000486978 MYO3AQ8NEV4 1616 aa10.74□□□□□ -0.69
CTDSPL-208ENST00000486978 ZNF518AQ6AHZ1 1483 aa10.74□□□□□ -0.69
CTDSPL-208ENST00000486978 SETD1AO15047 1707 aaKnown RBP10.73□□□□□ -0.69
CTDSPL-208ENST00000486978 KIDINS220Q9ULH0 1771 aa10.73□□□□□ -0.69
CTDSPL-208ENST00000486978 EFCAB2Q5VUJ9 269 aa10.73□□□□□ -0.69
CTDSPL-208ENST00000486978 POTEAQ6S8J7 498 aa10.73□□□□□ -0.69
CTDSPL-208ENST00000486978 MROH2AA6NES4 1674 aa10.73□□□□□ -0.69
CTDSPL-208ENST00000486978 TOM1O60784 492 aa10.72□□□□□ -0.69
CTDSPL-208ENST00000486978 PKD2Q13563 968 aa10.72□□□□□ -0.69
CTDSPL-208ENST00000486978 MYT1LQ9UL68 1186 aa10.72□□□□□ -0.69
CTDSPL-208ENST00000486978 ZMYM3Q14202 1370 aa10.72□□□□□ -0.69
CTDSPL-208ENST00000486978 PLA2R1Q13018 1463 aa10.72□□□□□ -0.69
CTDSPL-208ENST00000486978 CEP170BQ9Y4F5 1589 aaPredicted RBP10.72□□□□□ -0.69
CTDSPL-208ENST00000486978 CLTCQ00610 1675 aaKnown RBP10.72□□□□□ -0.69
CTDSPL-208ENST00000486978 CDC42BPBQ9Y5S2 1711 aa10.72□□□□□ -0.69
CTDSPL-208ENST00000486978 STRCP1A6NGW2 1772 aa10.71□□□□□ -0.69
CTDSPL-208ENST00000486978 NPATQ14207 1427 aa10.71□□□□□ -0.69
CTDSPL-208ENST00000486978 NEURL4Q96JN8 1562 aa10.7□□□□□ -0.7
CTDSPL-208ENST00000486978 MLH3Q9UHC1 1453 aa10.7□□□□□ -0.7
CTDSPL-208ENST00000486978 ESF1Q9H501 851 aaKnown RBP10.7□□□□□ -0.7
CTDSPL-208ENST00000486978 SHANK2Q9UPX8 1470 aa10.69□□□□□ -0.7
CTDSPL-208ENST00000486978 DNMT1P26358 1616 aaKnown RBP10.69□□□□□ -0.7
CTDSPL-208ENST00000486978 CNTLNQ9NXG0 1405 aa10.68□□□□□ -0.7
CTDSPL-208ENST00000486978 VWDEQ8N2E2 1590 aa10.68□□□□□ -0.7
CTDSPL-208ENST00000486978 ARHGAP5Q13017 1502 aa10.68□□□□□ -0.7
CTDSPL-208ENST00000486978 PTPRKQ15262 1439 aa10.67□□□□□ -0.7
CTDSPL-208ENST00000486978 POLR1AO95602 1720 aaPredicted RBP10.67□□□□□ -0.7
CTDSPL-208ENST00000486978 CPS1P31327 1500 aa10.67□□□□□ -0.7
CTDSPL-208ENST00000486978 ITSN2Q9NZM3 1697 aa10.66□□□□□ -0.7
CTDSPL-208ENST00000486978 LRRIQ1Q96JM4 1722 aa10.66□□□□□ -0.7
CTDSPL-208ENST00000486978 ABCC1P33527 1531 aa10.63□□□□□ -0.71
CTDSPL-208ENST00000486978 A2ML1A8K2U0 1454 aa10.61□□□□□ -0.71
CTDSPL-208ENST00000486978 XIRP1Q702N8 1843 aaKnown RBP10.61□□□□□ -0.71
CTDSPL-208ENST00000486978 LRRC7Q96NW7 1537 aa10.61□□□□□ -0.71
CTDSPL-208ENST00000486978 SAMD9LQ8IVG5 1584 aa10.6□□□□□ -0.71
CTDSPL-208ENST00000486978 ATP1B4Q9UN42 357 aaPredicted RBP10.6□□□□□ -0.71
CTDSPL-208ENST00000486978 PREX2Q70Z35 1606 aa10.59□□□□□ -0.71
CTDSPL-208ENST00000486978 FBXO31Q5XUX0 539 aaPredicted RBP10.59□□□□□ -0.71
CTDSPL-208ENST00000486978 CDC42BPAQ5VT25 1732 aa10.58□□□□□ -0.72
CTDSPL-208ENST00000486978 TROQ12816 1431 aaPredicted RBP10.58□□□□□ -0.72
CTDSPL-208ENST00000486978 PLXNC1O60486 1568 aa10.57□□□□□ -0.72
CTDSPL-208ENST00000486978 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.57□□□□□ -0.722e-7■■■■■ 32.5
CTDSPL-208ENST00000486978 GGT6Q6P531 493 aa10.57□□□□□ -0.72
CTDSPL-208ENST00000486978 UPF1Q92900 1129 aaKnown RBP eCLIP10.57□□□□□ -0.72
CTDSPL-208ENST00000486978 RNF17Q9BXT8 1623 aaKnown RBP10.56□□□□□ -0.72
CTDSPL-208ENST00000486978 UBTFP17480 764 aaKnown RBP10.56□□□□□ -0.72
CTDSPL-208ENST00000486978 EHMT2Q96KQ7 1210 aa10.55□□□□□ -0.72
CTDSPL-208ENST00000486978 NPHP4O75161 1426 aaPredicted RBP10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms