RNA–Protein interactions for RNA: ENST00000486461.1

PDZD11-204, Transcript of PDZ domain containing 11, humanhuman

TSL 3

Gene PDZD11, Length 416 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD11-204ENST00000486461 ARHGEF12Q9NZN5 1544 aa10.57□□□□□ -0.72
PDZD11-204ENST00000486461 MAGI2Q86UL8 1455 aa10.55□□□□□ -0.72
PDZD11-204ENST00000486461 CTTNBP2Q8WZ74 1663 aa10.55□□□□□ -0.72
PDZD11-204ENST00000486461 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.55□□□□□ -0.72
PDZD11-204ENST00000486461 HNRNPUL2Q1KMD3 747 aaKnown RBP10.55□□□□□ -0.72
PDZD11-204ENST00000486461 CFAP74Q9C0B2 1584 aa10.53□□□□□ -0.72
PDZD11-204ENST00000486461 HSPA1LP34931 641 aa10.52□□□□□ -0.73
PDZD11-204ENST00000486461 SCAF1Q9H7N4 1312 aaKnown RBP10.52□□□□□ -0.73
PDZD11-204ENST00000486461 HECW1Q76N89 1606 aa10.51□□□□□ -0.73
PDZD11-204ENST00000486461 NCOA1Q15788 1441 aa10.5□□□□□ -0.73
PDZD11-204ENST00000486461 C9orf84Q5VXU9 1444 aa10.5□□□□□ -0.73
PDZD11-204ENST00000486461 ATP10AO60312 1499 aa10.5□□□□□ -0.73
PDZD11-204ENST00000486461 ZNF335Q9H4Z2 1342 aaPredicted RBP10.5□□□□□ -0.73
PDZD11-204ENST00000486461 P3H3Q8IVL6 736 aa10.49□□□□□ -0.73
PDZD11-204ENST00000486461 PIP4K2BP78356 416 aa10.47□□□□□ -0.73
PDZD11-204ENST00000486461 PLEKHD1A6NEE1 506 aa10.46□□□□□ -0.73
PDZD11-204ENST00000486461 TRAPPC8Q9Y2L5 1435 aa10.46□□□□□ -0.74
PDZD11-204ENST00000486461 RAPGEF6Q8TEU7 1601 aa10.46□□□□□ -0.74
PDZD11-204ENST00000486461 C3P01024 1663 aa10.46□□□□□ -0.74
PDZD11-204ENST00000486461 SCAPERQ9BY12 1400 aa10.45□□□□□ -0.74
PDZD11-204ENST00000486461 TOM1O60784 492 aa10.45□□□□□ -0.74
PDZD11-204ENST00000486461 ESF1Q9H501 851 aaKnown RBP10.45□□□□□ -0.74
PDZD11-204ENST00000486461 CAMSAP1Q5T5Y3 1602 aa10.44□□□□□ -0.74
PDZD11-204ENST00000486461 NCKAP5LQ9HCH0 1330 aa10.44□□□□□ -0.74
PDZD11-204ENST00000486461 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.43□□□□□ -0.74
PDZD11-204ENST00000486461 PKD2Q13563 968 aa10.41□□□□□ -0.74
PDZD11-204ENST00000486461 MYT1LQ9UL68 1186 aa10.4□□□□□ -0.74
PDZD11-204ENST00000486461 NUP153P49790 1475 aaKnown RBP10.4□□□□□ -0.74
PDZD11-204ENST00000486461 PPP6R1Q9UPN7 881 aa10.38□□□□□ -0.75
PDZD11-204ENST00000486461 PLCH2O75038 1416 aa10.37□□□□□ -0.75
PDZD11-204ENST00000486461 PLA2R1Q13018 1463 aa10.36□□□□□ -0.75
PDZD11-204ENST00000486461 NPATQ14207 1427 aa10.36□□□□□ -0.75
PDZD11-204ENST00000486461 CNTLNQ9NXG0 1405 aa10.36□□□□□ -0.75
PDZD11-204ENST00000486461 EFCAB2Q5VUJ9 269 aa10.36□□□□□ -0.75
PDZD11-204ENST00000486461 RGS17Q9UGC6 210 aaPredicted RBP10.36□□□□□ -0.75
PDZD11-204ENST00000486461 ZNF518AQ6AHZ1 1483 aa10.36□□□□□ -0.75
PDZD11-204ENST00000486461 AGLP35573 1532 aa10.35□□□□□ -0.75
PDZD11-204ENST00000486461 SUPT6HQ7KZ85 1726 aaKnown RBP10.35□□□□□ -0.75
PDZD11-204ENST00000486461 REREQ9P2R6 1566 aa10.35□□□□□ -0.75
PDZD11-204ENST00000486461 DIP2CQ9Y2E4 1556 aa10.35□□□□□ -0.75
PDZD11-204ENST00000486461 CPS1P31327 1500 aa10.34□□□□□ -0.75
PDZD11-204ENST00000486461 AFAP1Q8N556 730 aa10.34□□□□□ -0.75
PDZD11-204ENST00000486461 SENP3Q9H4L4 574 aaPredicted RBP10.34□□□□□ -0.75
PDZD11-204ENST00000486461 TCOF1Q13428 1488 aaKnown RBP10.34□□□□□ -0.75
PDZD11-204ENST00000486461 SAMD9Q5K651 1589 aa10.34□□□□□ -0.75
PDZD11-204ENST00000486461 PTPRKQ15262 1439 aa10.33□□□□□ -0.76
PDZD11-204ENST00000486461 KDM5CP41229 1560 aa10.32□□□□□ -0.76
PDZD11-204ENST00000486461 PRXQ9BXM0 1461 aa10.32□□□□□ -0.76
PDZD11-204ENST00000486461 ZNF142P52746 1687 aaPredicted RBP10.31□□□□□ -0.76
PDZD11-204ENST00000486461 MYO5CQ9NQX4 1742 aa10.3□□□□□ -0.76
PDZD11-204ENST00000486461 ZMYM3Q14202 1370 aa10.3□□□□□ -0.76
PDZD11-204ENST00000486461 ABCA6Q8N139 1617 aa10.3□□□□□ -0.76
PDZD11-204ENST00000486461 MROH2AA6NES4 1674 aa10.3□□□□□ -0.76
PDZD11-204ENST00000486461 SHANK2Q9UPX8 1470 aa10.3□□□□□ -0.76
PDZD11-204ENST00000486461 POTEAQ6S8J7 498 aa10.29□□□□□ -0.76
PDZD11-204ENST00000486461 CEP170BQ9Y4F5 1589 aaPredicted RBP10.29□□□□□ -0.76
PDZD11-204ENST00000486461 MYO3AQ8NEV4 1616 aa10.29□□□□□ -0.76
PDZD11-204ENST00000486461 MLH3Q9UHC1 1453 aa10.28□□□□□ -0.76
PDZD11-204ENST00000486461 ALKQ9UM73 1620 aa10.27□□□□□ -0.77
PDZD11-204ENST00000486461 RANGAP1P46060 587 aaPredicted RBP10.26□□□□□ -0.77
PDZD11-204ENST00000486461 ARHGAP5Q13017 1502 aa10.26□□□□□ -0.77
PDZD11-204ENST00000486461 CDK13Q14004 1512 aaKnown RBP10.24□□□□□ -0.77
PDZD11-204ENST00000486461 SETD1AO15047 1707 aaKnown RBP10.24□□□□□ -0.77
PDZD11-204ENST00000486461 POLR1AO95602 1720 aaPredicted RBP10.23□□□□□ -0.77
PDZD11-204ENST00000486461 CLTCQ00610 1675 aaKnown RBP10.22□□□□□ -0.77
PDZD11-204ENST00000486461 A2ML1A8K2U0 1454 aa10.22□□□□□ -0.77
PDZD11-204ENST00000486461 DNMT1P26358 1616 aaKnown RBP10.22□□□□□ -0.77
PDZD11-204ENST00000486461 VWDEQ8N2E2 1590 aa10.21□□□□□ -0.78
PDZD11-204ENST00000486461 NEURL4Q96JN8 1562 aa10.21□□□□□ -0.78
PDZD11-204ENST00000486461 KIDINS220Q9ULH0 1771 aa10.21□□□□□ -0.78
PDZD11-204ENST00000486461 UPF1Q92900 1129 aaKnown RBP eCLIP10.2□□□□□ -0.78
PDZD11-204ENST00000486461 CDK11AQ9UQ88 783 aaPredicted RBP10.2□□□□□ -0.78
PDZD11-204ENST00000486461 KIF14Q15058 1648 aa10.19□□□□□ -0.78
PDZD11-204ENST00000486461 RNF17Q9BXT8 1623 aaKnown RBP10.19□□□□□ -0.78
PDZD11-204ENST00000486461 ANKLE2Q86XL3 938 aa10.19□□□□□ -0.78
PDZD11-204ENST00000486461 ATP1B4Q9UN42 357 aaPredicted RBP10.18□□□□□ -0.78
PDZD11-204ENST00000486461 ITSN2Q9NZM3 1697 aa10.17□□□□□ -0.78
PDZD11-204ENST00000486461 ABCC1P33527 1531 aa10.17□□□□□ -0.78
PDZD11-204ENST00000486461 LRRC7Q96NW7 1537 aa10.17□□□□□ -0.78
PDZD11-204ENST00000486461 CDC42BPBQ9Y5S2 1711 aa10.16□□□□□ -0.78
PDZD11-204ENST00000486461 GGT6Q6P531 493 aa10.16□□□□□ -0.78
PDZD11-204ENST00000486461 NPHP4O75161 1426 aaPredicted RBP10.16□□□□□ -0.78
PDZD11-204ENST00000486461 CLIP1P30622 1438 aa10.15□□□□□ -0.79
PDZD11-204ENST00000486461 TROQ12816 1431 aaPredicted RBP10.15□□□□□ -0.79
PDZD11-204ENST00000486461 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.14□□□□□ -0.79
PDZD11-204ENST00000486461 SYNMO15061 1565 aa10.14□□□□□ -0.79
PDZD11-204ENST00000486461 STRCP1A6NGW2 1772 aa10.14□□□□□ -0.79
PDZD11-204ENST00000486461 MED14O60244 1454 aa10.13□□□□□ -0.79
PDZD11-204ENST00000486461 THEMISQ8N1K5 641 aaPredicted RBP10.13□□□□□ -0.79
PDZD11-204ENST00000486461 TNRQ92752 1358 aa10.13□□□□□ -0.79
PDZD11-204ENST00000486461 SPAG9O60271 1321 aaKnown RBP10.12□□□□□ -0.79
PDZD11-204ENST00000486461 DEPDC5O75140 1603 aa10.12□□□□□ -0.79
PDZD11-204ENST00000486461 CSRNP3Q8WYN3 585 aa10.12□□□□□ -0.79
PDZD11-204ENST00000486461 IQGAP1P46940 1657 aa10.12□□□□□ -0.79
PDZD11-204ENST00000486461 PREX2Q70Z35 1606 aa10.11□□□□□ -0.79
PDZD11-204ENST00000486461 SAMD9LQ8IVG5 1584 aa10.11□□□□□ -0.79
PDZD11-204ENST00000486461 FAM135BQ49AJ0 1406 aa10.11□□□□□ -0.79
PDZD11-204ENST00000486461 A2MP01023 1474 aa10.1□□□□□ -0.79
PDZD11-204ENST00000486461 TRIM52Q96A61 297 aa10.1□□□□□ -0.79
PDZD11-204ENST00000486461 PLXNC1O60486 1568 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms