RNA–Protein interactions for RNA: ENST00000485249.1

KDM4A-205, Transcript of lysine demethylase 4A, humanhuman

TSL 3

Gene KDM4A, Length 852 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM4A-205ENST00000485249 ERICH3Q5RHP9 1530 aa9.97□□□□□ -0.81
KDM4A-205ENST00000485249 KIF21BO75037 1637 aa9.96□□□□□ -0.81
KDM4A-205ENST00000485249 PRXQ9BXM0 1461 aa9.96□□□□□ -0.82
KDM4A-205ENST00000485249 ADAMTS12P58397 1594 aa9.96□□□□□ -0.82
KDM4A-205ENST00000485249 STK24Q9Y6E0 443 aa9.95□□□□□ -0.82
KDM4A-205ENST00000485249 GRIN2BQ13224 1484 aa9.95□□□□□ -0.82
KDM4A-205ENST00000485249 CUL7Q14999 1698 aa9.95□□□□□ -0.82
KDM4A-205ENST00000485249 ZNF579Q8NAF0 562 aaKnown RBP9.94□□□□□ -0.82
KDM4A-205ENST00000485249 SNAPC4Q5SXM2 1469 aa9.93□□□□□ -0.82
KDM4A-205ENST00000485249 PDAP1Q13442 181 aaKnown RBP9.93□□□□□ -0.82
KDM4A-205ENST00000485249 RAPGEF2Q9Y4G8 1499 aa9.92□□□□□ -0.82
KDM4A-205ENST00000485249 CHD1O14646 1710 aa9.92□□□□□ -0.82
KDM4A-205ENST00000485249 LOC105371045A0A1W2PR82 267 aa9.91□□□□□ -0.82
KDM4A-205ENST00000485249 TSHZ2Q9NRE2 1034 aa9.91□□□□□ -0.82
KDM4A-205ENST00000485249 PCDHB8Q9UN66 801 aa9.91□□□□□ -0.82
KDM4A-205ENST00000485249 PCDHB13Q9Y5F0 798 aa9.91□□□□□ -0.82
KDM4A-205ENST00000485249 CARMIL1Q5VZK9 1371 aa9.9□□□□□ -0.82
KDM4A-205ENST00000485249 GTPBP6O43824 516 aaPredicted RBP9.9□□□□□ -0.82
KDM4A-205ENST00000485249 CD44P16070 742 aaKnown RBP9.89□□□□□ -0.83
KDM4A-205ENST00000485249 RYDENQ9NUL5 291 aaKnown RBP9.89□□□□□ -0.83
KDM4A-205ENST00000485249 KDM2AQ9Y2K7 1162 aa9.89□□□□□ -0.83
KDM4A-205ENST00000485249 MAGI1Q96QZ7 1491 aaPredicted RBP9.88□□□□□ -0.83
KDM4A-205ENST00000485249 KIF12Q96FN5 646 aa9.88□□□□□ -0.83
KDM4A-205ENST00000485249 FHAD1B1AJZ9 1412 aa9.88□□□□□ -0.83
KDM4A-205ENST00000485249 GOLGA3Q08378 1498 aa9.87□□□□□ -0.83
KDM4A-205ENST00000485249 MAP3K13O43283 966 aa9.87□□□□□ -0.83
KDM4A-205ENST00000485249 ZRANB1Q9UGI0 708 aa9.87□□□□□ -0.83
KDM4A-205ENST00000485249 CTTNBP2Q8WZ74 1663 aa9.87□□□□□ -0.83
KDM4A-205ENST00000485249 PSEN1P49768 467 aa9.86□□□□□ -0.83
KDM4A-205ENST00000485249 IFNL1Q8IU54 200 aa9.86□□□□□ -0.83
KDM4A-205ENST00000485249 SYNJ2O15056 1496 aa9.85□□□□□ -0.83
KDM4A-205ENST00000485249 GRIN2AQ12879 1464 aa9.85□□□□□ -0.83
KDM4A-205ENST00000485249 CEP170Q5SW79 1584 aa9.84□□□□□ -0.83
KDM4A-205ENST00000485249 C19orf67A6NJJ6 358 aa9.81□□□□□ -0.84
KDM4A-205ENST00000485249 PHF12Q96QT6 1004 aa9.81□□□□□ -0.84
KDM4A-205ENST00000485249 NUP160Q12769 1436 aa9.81□□□□□ -0.84
KDM4A-205ENST00000485249 TNIKQ9UKE5 1360 aa9.79□□□□□ -0.84
KDM4A-205ENST00000485249 BCANQ96GW7 911 aa9.79□□□□□ -0.84
KDM4A-205ENST00000485249 CLASP1Q7Z460 1538 aa9.77□□□□□ -0.84
KDM4A-205ENST00000485249 IQGAP2Q13576 1575 aa9.76□□□□□ -0.85
KDM4A-205ENST00000485249 UBTFP17480 764 aaKnown RBP9.76□□□□□ -0.85
KDM4A-205ENST00000485249 CHMP7Q8WUX9 453 aaPredicted RBP9.76□□□□□ -0.85
KDM4A-205ENST00000485249 MFRPQ9BY79 579 aa9.75□□□□□ -0.85
KDM4A-205ENST00000485249 KIAA0586Q9BVV6 1533 aa9.75□□□□□ -0.85
KDM4A-205ENST00000485249 SHROOM2Q13796 1616 aa9.74□□□□□ -0.85
KDM4A-205ENST00000485249 CEP162Q5TB80 1403 aa9.74□□□□□ -0.85
KDM4A-205ENST00000485249 SAMD9Q5K651 1589 aa9.74□□□□□ -0.85
KDM4A-205ENST00000485249 CABP2Q9NPB3 220 aa9.73□□□□□ -0.85
KDM4A-205ENST00000485249 ARHGAP35Q9NRY4 1499 aa9.72□□□□□ -0.85
KDM4A-205ENST00000485249 UGGT2Q9NYU1 1516 aa9.72□□□□□ -0.85
KDM4A-205ENST00000485249 EFCAB3Q8N7B9 438 aa9.72□□□□□ -0.85
KDM4A-205ENST00000485249 MS4A3Q96HJ5 214 aa9.72□□□□□ -0.85
KDM4A-205ENST00000485249 ERCC6L2Q5T890 1561 aa9.71□□□□□ -0.85
KDM4A-205ENST00000485249 ARAP1Q96P48 1450 aa9.71□□□□□ -0.86
KDM4A-205ENST00000485249 DISP1Q96F81 1524 aa9.71□□□□□ -0.86
KDM4A-205ENST00000485249 SOX12O15370 315 aa9.7□□□□□ -0.86
KDM4A-205ENST00000485249 CLIP1P30622 1438 aa9.7□□□□□ -0.86
KDM4A-205ENST00000485249 KIAA0556O60303 1618 aa9.69□□□□□ -0.86
KDM4A-205ENST00000485249 RANGAP1P46060 587 aaPredicted RBP9.69□□□□□ -0.86
KDM4A-205ENST00000485249 NLRP6P59044 892 aa9.69□□□□□ -0.86
KDM4A-205ENST00000485249 FBXO22Q8NEZ5 403 aa9.69□□□□□ -0.86
KDM4A-205ENST00000485249 TMEM106CQ9BVX2 250 aa9.68□□□□□ -0.86
KDM4A-205ENST00000485249 EFCAB5A4FU69 1503 aa9.67□□□□□ -0.86
KDM4A-205ENST00000485249 TRPC6Q9Y210 931 aa9.67□□□□□ -0.86
KDM4A-205ENST00000485249 FHOD3Q2V2M9 1422 aa9.66□□□□□ -0.86
KDM4A-205ENST00000485249 PHF8Q9UPP1 1060 aa9.66□□□□□ -0.86
KDM4A-205ENST00000485249 LRRIQ1Q96JM4 1722 aa9.65□□□□□ -0.86
KDM4A-205ENST00000485249 TIE1P35590 1138 aa9.65□□□□□ -0.86
KDM4A-205ENST00000485249 P3H3Q8IVL6 736 aa9.64□□□□□ -0.87
KDM4A-205ENST00000485249 JPH4Q96JJ6 628 aa9.64□□□□□ -0.87
KDM4A-205ENST00000485249 PRG4Q92954 1404 aaPredicted RBP9.64□□□□□ -0.87
KDM4A-205ENST00000485249 HAX1O00165 279 aa9.63□□□□□ -0.87
KDM4A-205ENST00000485249 CLCN6P51797 869 aa9.63□□□□□ -0.87
KDM4A-205ENST00000485249 GOLGA2Q08379 1002 aa9.63□□□□□ -0.87
KDM4A-205ENST00000485249 CADPS2Q86UW7 1296 aa9.62□□□□□ -0.87
KDM4A-205ENST00000485249 PCF11O94913 1555 aaKnown RBP9.62□□□□□ -0.87
KDM4A-205ENST00000485249 TTLL13PA6NNM8 815 aa9.61□□□□□ -0.87
KDM4A-205ENST00000485249 PPP1R37O75864 691 aa9.61□□□□□ -0.87
KDM4A-205ENST00000485249 VPS8Q8N3P4 1428 aa9.6□□□□□ -0.87
KDM4A-205ENST00000485249 GALR2O43603 387 aaPredicted RBP9.6□□□□□ -0.87
KDM4A-205ENST00000485249 BMP2KQ9NSY1 1161 aaPredicted RBP9.6□□□□□ -0.87
KDM4A-205ENST00000485249 MS4A4AQ96JQ5 239 aa9.59□□□□□ -0.87
KDM4A-205ENST00000485249 ARHGEF11O15085 1522 aa9.58□□□□□ -0.88
KDM4A-205ENST00000485249 RIMBP3CA6NJZ7 1639 aa9.58□□□□□ -0.88
KDM4A-205ENST00000485249 RIMBP3BA6NNM3 1639 aa9.58□□□□□ -0.88
KDM4A-205ENST00000485249 RIMBP3Q9UFD9 1639 aa9.58□□□□□ -0.88
KDM4A-205ENST00000485249 EVX2Q03828 476 aa9.58□□□□□ -0.88
KDM4A-205ENST00000485249 MKRN3Q13064 507 aaKnown RBP9.58□□□□□ -0.88
KDM4A-205ENST00000485249 NBR1Q14596 966 aa9.58□□□□□ -0.88
KDM4A-205ENST00000485249 ABCA8O94911 1581 aa9.58□□□□□ -0.88
KDM4A-205ENST00000485249 CARMIL2Q6F5E8 1435 aa9.56□□□□□ -0.88
KDM4A-205ENST00000485249 RAPGEF6Q8TEU7 1601 aa9.56□□□□□ -0.88
KDM4A-205ENST00000485249 PLB1Q6P1J6 1458 aa9.56□□□□□ -0.88
KDM4A-205ENST00000485249 ILDR1Q86SU0 546 aaPredicted RBP9.55□□□□□ -0.88
KDM4A-205ENST00000485249 CFAP43Q8NDM7 1665 aa9.55□□□□□ -0.88
KDM4A-205ENST00000485249 TRIM35Q9UPQ4 493 aa9.54□□□□□ -0.88
KDM4A-205ENST00000485249 CASKIN1Q8WXD9 1431 aa9.54□□□□□ -0.88
KDM4A-205ENST00000485249 NUP153P49790 1475 aaKnown RBP9.53□□□□□ -0.88
KDM4A-205ENST00000485249 WDR70Q9NW82 654 aa9.53□□□□□ -0.88
KDM4A-205ENST00000485249 FMN1Q68DA7 1419 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms