RNA–Protein interactions for RNA: ENST00000484959.1

NME6-217, Transcript of NME/NM23 nucleoside diphosphate kinase 6, humanhuman

TSL 1 (best)

Gene NME6, Length 1,091 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME6-217ENST00000484959 MED1Q15648 1581 aaPredicted RBP18.35■□□□□ 0.53
NME6-217ENST00000484959 UHRF1BP1Q6BDS2 1440 aa18.35■□□□□ 0.53
NME6-217ENST00000484959 ARHGEF12Q9NZN5 1544 aa18.34■□□□□ 0.53
NME6-217ENST00000484959 IQSEC2Q5JU85 1478 aa18.34■□□□□ 0.53
NME6-217ENST00000484959 UBAP1LF5GYI3 381 aa18.34■□□□□ 0.53
NME6-217ENST00000484959 P3H3Q8IVL6 736 aa18.33■□□□□ 0.52
NME6-217ENST00000484959 ZMYM4Q5VZL5 1548 aa18.33■□□□□ 0.52
NME6-217ENST00000484959 CTTNBP2Q8WZ74 1663 aa18.31■□□□□ 0.52
NME6-217ENST00000484959 EFCAB5A4FU69 1503 aa18.31■□□□□ 0.52
NME6-217ENST00000484959 HECW1Q76N89 1606 aa18.29■□□□□ 0.52
NME6-217ENST00000484959 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.28■□□□□ 0.52
NME6-217ENST00000484959 HNRNPUL2Q1KMD3 747 aaKnown RBP18.28■□□□□ 0.52
NME6-217ENST00000484959 ZNF335Q9H4Z2 1342 aaPredicted RBP18.26■□□□□ 0.51
NME6-217ENST00000484959 HSPA1LP34931 641 aa18.25■□□□□ 0.51
NME6-217ENST00000484959 NCOA1Q15788 1441 aa18.23■□□□□ 0.51
NME6-217ENST00000484959 MAGI2Q86UL8 1455 aa18.21■□□□□ 0.51
NME6-217ENST00000484959 C9orf84Q5VXU9 1444 aa18.2■□□□□ 0.5
NME6-217ENST00000484959 SCAF1Q9H7N4 1312 aaKnown RBP18.2■□□□□ 0.5
NME6-217ENST00000484959 ATP10AO60312 1499 aa18.19■□□□□ 0.5
NME6-217ENST00000484959 RAPGEF6Q8TEU7 1601 aa18.18■□□□□ 0.5
NME6-217ENST00000484959 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.18■□□□□ 0.5
NME6-217ENST00000484959 CFAP74Q9C0B2 1584 aa18.17■□□□□ 0.5
NME6-217ENST00000484959 NUP153P49790 1475 aaKnown RBP18.17■□□□□ 0.5
NME6-217ENST00000484959 PIP4K2BP78356 416 aa18.16■□□□□ 0.5
NME6-217ENST00000484959 SCAPERQ9BY12 1400 aa18.15■□□□□ 0.5
NME6-217ENST00000484959 NCKAP5LQ9HCH0 1330 aa18.15■□□□□ 0.5
NME6-217ENST00000484959 SETD1BQ9UPS6 1966 aaKnown RBP18.15■□□□□ 0.5
NME6-217ENST00000484959 C3P01024 1663 aa18.15■□□□□ 0.5
NME6-217ENST00000484959 CAMSAP1Q5T5Y3 1602 aa18.12■□□□□ 0.49
NME6-217ENST00000484959 TRAPPC8Q9Y2L5 1435 aa18.08■□□□□ 0.49
NME6-217ENST00000484959 FAM9AQ8IZU1 332 aaPredicted RBP18.07■□□□□ 0.48
NME6-217ENST00000484959 PLEKHD1A6NEE1 506 aa18.06■□□□□ 0.48
NME6-217ENST00000484959 SAMD9Q5K651 1589 aa18.04■□□□□ 0.48
NME6-217ENST00000484959 PRXQ9BXM0 1461 aa18.01■□□□□ 0.47
NME6-217ENST00000484959 DIP2CQ9Y2E4 1556 aa18.01■□□□□ 0.47
NME6-217ENST00000484959 AFAP1Q8N556 730 aa18■□□□□ 0.47
NME6-217ENST00000484959 RGS17Q9UGC6 210 aaPredicted RBP18■□□□□ 0.47
NME6-217ENST00000484959 PLCH2O75038 1416 aa17.99■□□□□ 0.47
NME6-217ENST00000484959 RANGAP1P46060 587 aaPredicted RBP17.99■□□□□ 0.47
NME6-217ENST00000484959 MYT1LQ9UL68 1186 aa17.98■□□□□ 0.47
NME6-217ENST00000484959 ABCA6Q8N139 1617 aa17.97■□□□□ 0.47
NME6-217ENST00000484959 ESF1Q9H501 851 aaKnown RBP17.96■□□□□ 0.47
NME6-217ENST00000484959 ALKQ9UM73 1620 aa17.95■□□□□ 0.46
NME6-217ENST00000484959 TOM1O60784 492 aa17.95■□□□□ 0.46
NME6-217ENST00000484959 KDM5CP41229 1560 aa17.95■□□□□ 0.46
NME6-217ENST00000484959 TCOF1Q13428 1488 aaKnown RBP17.95■□□□□ 0.46
NME6-217ENST00000484959 CDK13Q14004 1512 aaKnown RBP17.94■□□□□ 0.46
NME6-217ENST00000484959 ZNF518AQ6AHZ1 1483 aa17.94■□□□□ 0.46
NME6-217ENST00000484959 REREQ9P2R6 1566 aa17.91■□□□□ 0.46
NME6-217ENST00000484959 PKD2Q13563 968 aa17.91■□□□□ 0.46
NME6-217ENST00000484959 PLA2R1Q13018 1463 aa17.9■□□□□ 0.46
NME6-217ENST00000484959 AGLP35573 1532 aa17.9■□□□□ 0.46
NME6-217ENST00000484959 NPATQ14207 1427 aa17.89■□□□□ 0.46
NME6-217ENST00000484959 EFCAB2Q5VUJ9 269 aa17.89■□□□□ 0.45
NME6-217ENST00000484959 MYO3AQ8NEV4 1616 aa17.89■□□□□ 0.45
NME6-217ENST00000484959 SRCAPQ6ZRS2 3230 aa17.88■□□□□ 0.45
NME6-217ENST00000484959 CNTLNQ9NXG0 1405 aa17.88■□□□□ 0.45
NME6-217ENST00000484959 CEP170BQ9Y4F5 1589 aaPredicted RBP17.87■□□□□ 0.45
NME6-217ENST00000484959 ZNF142P52746 1687 aaPredicted RBP17.87■□□□□ 0.45
NME6-217ENST00000484959 POTEAQ6S8J7 498 aa17.86■□□□□ 0.45
NME6-217ENST00000484959 ZMYM3Q14202 1370 aa17.85■□□□□ 0.45
NME6-217ENST00000484959 MYO5CQ9NQX4 1742 aa17.85■□□□□ 0.45
NME6-217ENST00000484959 SUPT6HQ7KZ85 1726 aaKnown RBP17.84■□□□□ 0.45
NME6-217ENST00000484959 CPS1P31327 1500 aa17.83■□□□□ 0.45
NME6-217ENST00000484959 SHANK2Q9UPX8 1470 aa17.83■□□□□ 0.45
NME6-217ENST00000484959 MAPK8IP2Q13387 824 aaPredicted RBP17.83■□□□□ 0.44
NME6-217ENST00000484959 SETD1AO15047 1707 aaKnown RBP17.83■□□□□ 0.44
NME6-217ENST00000484959 KIF14Q15058 1648 aa17.83■□□□□ 0.44
NME6-217ENST00000484959 ARHGAP5Q13017 1502 aa17.82■□□□□ 0.44
NME6-217ENST00000484959 MLH3Q9UHC1 1453 aa17.82■□□□□ 0.44
NME6-217ENST00000484959 MROH2AA6NES4 1674 aa17.8■□□□□ 0.44
NME6-217ENST00000484959 NEURL4Q96JN8 1562 aa17.79■□□□□ 0.44
NME6-217ENST00000484959 PTPRKQ15262 1439 aa17.79■□□□□ 0.44
NME6-217ENST00000484959 CLTCQ00610 1675 aaKnown RBP17.77■□□□□ 0.43
NME6-217ENST00000484959 VWDEQ8N2E2 1590 aa17.76■□□□□ 0.43
NME6-217ENST00000484959 KIDINS220Q9ULH0 1771 aa17.75■□□□□ 0.43
NME6-217ENST00000484959 DNMT1P26358 1616 aaKnown RBP17.73■□□□□ 0.43
NME6-217ENST00000484959 ATP1B4Q9UN42 357 aaPredicted RBP17.71■□□□□ 0.43
NME6-217ENST00000484959 ABCC1P33527 1531 aa17.71■□□□□ 0.43
NME6-217ENST00000484959 A2ML1A8K2U0 1454 aa17.7■□□□□ 0.42
NME6-217ENST00000484959 POLR1AO95602 1720 aaPredicted RBP17.7■□□□□ 0.42
NME6-217ENST00000484959 ITSN2Q9NZM3 1697 aa17.68■□□□□ 0.42
NME6-217ENST00000484959 CDC42BPBQ9Y5S2 1711 aa17.67■□□□□ 0.42
NME6-217ENST00000484959 STRCP1A6NGW2 1772 aa17.66■□□□□ 0.42
NME6-217ENST00000484959 LRRC7Q96NW7 1537 aa17.66■□□□□ 0.42
NME6-217ENST00000484959 RNF17Q9BXT8 1623 aaKnown RBP17.65■□□□□ 0.42
NME6-217ENST00000484959 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.64■□□□□ 0.41
NME6-217ENST00000484959 TROQ12816 1431 aaPredicted RBP17.64■□□□□ 0.41
NME6-217ENST00000484959 GGT6Q6P531 493 aa17.63■□□□□ 0.41
NME6-217ENST00000484959 PPP4R3CPQ6ZMV5 832 aa17.63■□□□□ 0.41
NME6-217ENST00000484959 SAMD9LQ8IVG5 1584 aa17.62■□□□□ 0.41
NME6-217ENST00000484959 UPF1Q92900 1129 aaKnown RBP eCLIP17.62■□□□□ 0.41
NME6-217ENST00000484959 NPHP4O75161 1426 aaPredicted RBP17.61■□□□□ 0.41
NME6-217ENST00000484959 FBXO31Q5XUX0 539 aaPredicted RBP17.6■□□□□ 0.41
NME6-217ENST00000484959 PREX2Q70Z35 1606 aa17.6■□□□□ 0.41
NME6-217ENST00000484959 CSRNP3Q8WYN3 585 aa17.59■□□□□ 0.41
NME6-217ENST00000484959 PLXNC1O60486 1568 aa17.58■□□□□ 0.41
NME6-217ENST00000484959 ANKLE2Q86XL3 938 aa17.57■□□□□ 0.4
NME6-217ENST00000484959 TNRQ92752 1358 aa17.56■□□□□ 0.4
NME6-217ENST00000484959 CDK11AQ9UQ88 783 aaPredicted RBP17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms