RNA–Protein interactions for RNA: ENST00000484729.2

HLA-DQB1-208, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

Gene HLA-DQB1, Length 783 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-208ENST00000484729 CDK13Q14004 1512 aaKnown RBP25.65■■□□□ 1.7
HLA-DQB1-208ENST00000484729 FER1L4A9Z1Z3 1794 aa25.64■■□□□ 1.7
HLA-DQB1-208ENST00000484729 PLCH2O75038 1416 aa25.6■■□□□ 1.69
HLA-DQB1-208ENST00000484729 CEBPAP49715 358 aaPredicted RBP25.59■■□□□ 1.69
HLA-DQB1-208ENST00000484729 ATP10AO60312 1499 aa25.57■■□□□ 1.68
HLA-DQB1-208ENST00000484729 ARHGEF12Q9NZN5 1544 aa25.57■■□□□ 1.68
HLA-DQB1-208ENST00000484729 ATP1B4Q9UN42 357 aaPredicted RBP25.55■■□□□ 1.68
HLA-DQB1-208ENST00000484729 C9orf84Q5VXU9 1444 aa25.54■■□□□ 1.68
HLA-DQB1-208ENST00000484729 EFCAB2Q5VUJ9 269 aa25.52■■□□□ 1.68
HLA-DQB1-208ENST00000484729 PREX1Q8TCU6 1659 aa25.51■■□□□ 1.67
HLA-DQB1-208ENST00000484729 EHMT2Q96KQ7 1210 aa25.49■■□□□ 1.67
HLA-DQB1-208ENST00000484729 MYO5CQ9NQX4 1742 aa25.46■■□□□ 1.67
HLA-DQB1-208ENST00000484729 ILDR2Q71H61 639 aa25.46■■□□□ 1.67
HLA-DQB1-208ENST00000484729 AFAP1Q8N556 730 aa25.46■■□□□ 1.67
HLA-DQB1-208ENST00000484729 DISP3Q9P2K9 1392 aa25.45■■□□□ 1.67
HLA-DQB1-208ENST00000484729 STRCQ7RTU9 1775 aa25.45■■□□□ 1.66
HLA-DQB1-208ENST00000484729 KIF14Q15058 1648 aa25.44■■□□□ 1.66
HLA-DQB1-208ENST00000484729 MYT1LQ9UL68 1186 aa25.43■■□□□ 1.66
HLA-DQB1-208ENST00000484729 DMRT2Q9Y5R5 561 aa25.42■■□□□ 1.66
HLA-DQB1-208ENST00000484729 ZNF518AQ6AHZ1 1483 aa25.41■■□□□ 1.66
HLA-DQB1-208ENST00000484729 UHRF1BP1Q6BDS2 1440 aa25.41■■□□□ 1.66
HLA-DQB1-208ENST00000484729 ARHGAP5Q13017 1502 aa25.39■■□□□ 1.66
HLA-DQB1-208ENST00000484729 CDK11AQ9UQ88 783 aaPredicted RBP25.39■■□□□ 1.66
HLA-DQB1-208ENST00000484729 FMN1Q68DA7 1419 aa25.37■■□□□ 1.65
HLA-DQB1-208ENST00000484729 KDM5CP41229 1560 aa25.37■■□□□ 1.65
HLA-DQB1-208ENST00000484729 UBTFP17480 764 aaKnown RBP25.37■■□□□ 1.65
HLA-DQB1-208ENST00000484729 DIP2CQ9Y2E4 1556 aa25.36■■□□□ 1.65
HLA-DQB1-208ENST00000484729 ARHGAP35Q9NRY4 1499 aa25.35■■□□□ 1.65
HLA-DQB1-208ENST00000484729 TROQ12816 1431 aaPredicted RBP25.35■■□□□ 1.65
HLA-DQB1-208ENST00000484729 CHIC1Q5VXU3 224 aa25.33■■□□□ 1.65
HLA-DQB1-208ENST00000484729 SOCS7O14512 581 aa25.32■■□□□ 1.64
HLA-DQB1-208ENST00000484729 SETD1BQ9UPS6 1966 aaKnown RBP25.32■■□□□ 1.64
HLA-DQB1-208ENST00000484729 C3P01024 1663 aa25.31■■□□□ 1.64
HLA-DQB1-208ENST00000484729 ABCA6Q8N139 1617 aa25.3■■□□□ 1.64
HLA-DQB1-208ENST00000484729 PTPRTO14522 1441 aa25.29■■□□□ 1.64
HLA-DQB1-208ENST00000484729 CLIP1P30622 1438 aa25.29■■□□□ 1.64
HLA-DQB1-208ENST00000484729 REREQ9P2R6 1566 aa25.28■■□□□ 1.64
HLA-DQB1-208ENST00000484729 ESF1Q9H501 851 aaKnown RBP25.28■■□□□ 1.64
HLA-DQB1-208ENST00000484729 LRRIQ1Q96JM4 1722 aa25.27■■□□□ 1.64
HLA-DQB1-208ENST00000484729 CDC42BPBQ9Y5S2 1711 aa25.27■■□□□ 1.64
HLA-DQB1-208ENST00000484729 TRAPPC8Q9Y2L5 1435 aa25.27■■□□□ 1.64
HLA-DQB1-208ENST00000484729 MLH3Q9UHC1 1453 aa25.27■■□□□ 1.64
HLA-DQB1-208ENST00000484729 LTBP4Q8N2S1 1624 aa25.23■■□□□ 1.63
HLA-DQB1-208ENST00000484729 AGLP35573 1532 aa25.22■■□□□ 1.63
HLA-DQB1-208ENST00000484729 SPATA31D1Q6ZQQ2 1576 aa25.22■■□□□ 1.63
HLA-DQB1-208ENST00000484729 ABCC1P33527 1531 aa25.21■■□□□ 1.63
HLA-DQB1-208ENST00000484729 PREX2Q70Z35 1606 aa25.19■■□□□ 1.62
HLA-DQB1-208ENST00000484729 NCOA1Q15788 1441 aa25.18■■□□□ 1.62
HLA-DQB1-208ENST00000484729 ITSN2Q9NZM3 1697 aa25.17■■□□□ 1.62
HLA-DQB1-208ENST00000484729 KIDINS220Q9ULH0 1771 aa25.16■■□□□ 1.62
HLA-DQB1-208ENST00000484729 CNTLNQ9NXG0 1405 aa25.13■■□□□ 1.61
HLA-DQB1-208ENST00000484729 CAMSAP1Q5T5Y3 1602 aa25.12■■□□□ 1.61
HLA-DQB1-208ENST00000484729 ZNF777Q9ULD5 760 aaPredicted RBP25.11■■□□□ 1.61
HLA-DQB1-208ENST00000484729 NCKAP5LQ9HCH0 1330 aa25.11■■□□□ 1.61
HLA-DQB1-208ENST00000484729 IQSEC2Q5JU85 1478 aa25.1■■□□□ 1.61
HLA-DQB1-208ENST00000484729 CDC42BPAQ5VT25 1732 aa25.09■■□□□ 1.61
HLA-DQB1-208ENST00000484729 ZMYM3Q14202 1370 aa25.08■■□□□ 1.61
HLA-DQB1-208ENST00000484729 SAMD9LQ8IVG5 1584 aa25.07■■□□□ 1.6
HLA-DQB1-208ENST00000484729 CASKIN1Q8WXD9 1431 aa25.07■■□□□ 1.6
HLA-DQB1-208ENST00000484729 CCDC18Q5T9S5 1454 aa25.07■■□□□ 1.6
HLA-DQB1-208ENST00000484729 ZNF335Q9H4Z2 1342 aaPredicted RBP25.07■■□□□ 1.6
HLA-DQB1-208ENST00000484729 NPATQ14207 1427 aa25.06■■□□□ 1.6
HLA-DQB1-208ENST00000484729 MROH2AA6NES4 1674 aa25.04■■□□□ 1.6
HLA-DQB1-208ENST00000484729 HNRNPMP52272 730 aaKnown RBP eCLIP25.04■■□□□ 1.6
HLA-DQB1-208ENST00000484729 SPAG9O60271 1321 aaKnown RBP25.04■■□□□ 1.6
HLA-DQB1-208ENST00000484729 SUPT6HQ7KZ85 1726 aaKnown RBP25.03■■□□□ 1.6
HLA-DQB1-208ENST00000484729 UBAP1LF5GYI3 381 aa25.03■■□□□ 1.6
HLA-DQB1-208ENST00000484729 SYCP2Q9BX26 1530 aa25.02■■□□□ 1.6
HLA-DQB1-208ENST00000484729 CLTCQ00610 1675 aaKnown RBP24.99■■□□□ 1.59
HLA-DQB1-208ENST00000484729 GPATCH8Q9UKJ3 1502 aaKnown RBP24.98■■□□□ 1.59
HLA-DQB1-208ENST00000484729 GGT6Q6P531 493 aa24.96■■□□□ 1.59
HLA-DQB1-208ENST00000484729 MYO3AQ8NEV4 1616 aa24.96■■□□□ 1.59
HLA-DQB1-208ENST00000484729 ATP7AQ04656 1500 aa24.96■■□□□ 1.59
HLA-DQB1-208ENST00000484729 PTPRKQ15262 1439 aa24.95■■□□□ 1.58
HLA-DQB1-208ENST00000484729 PKD2Q13563 968 aa24.94■■□□□ 1.58
HLA-DQB1-208ENST00000484729 A2MP01023 1474 aa24.94■■□□□ 1.58
HLA-DQB1-208ENST00000484729 FYCO1Q9BQS8 1478 aa24.93■■□□□ 1.58
HLA-DQB1-208ENST00000484729 ZNF142P52746 1687 aaPredicted RBP24.93■■□□□ 1.58
HLA-DQB1-208ENST00000484729 CEP170BQ9Y4F5 1589 aaPredicted RBP24.93■■□□□ 1.58
HLA-DQB1-208ENST00000484729 PLA2R1Q13018 1463 aa24.92■■□□□ 1.58
HLA-DQB1-208ENST00000484729 PLXNC1O60486 1568 aa24.92■■□□□ 1.58
HLA-DQB1-208ENST00000484729 TCOF1Q13428 1488 aaKnown RBP24.91■■□□□ 1.58
HLA-DQB1-208ENST00000484729 CFDP1Q9UEE9 299 aaPredicted RBP24.91■■□□□ 1.58
HLA-DQB1-208ENST00000484729 INO80Q9ULG1 1556 aaPredicted RBP24.91■■□□□ 1.58
HLA-DQB1-208ENST00000484729 KIAA1107Q9UPP5 1409 aa24.89■■□□□ 1.58
HLA-DQB1-208ENST00000484729 PPP6R1Q9UPN7 881 aa24.88■■□□□ 1.57
HLA-DQB1-208ENST00000484729 CCNB3Q8WWL7 1395 aa24.86■■□□□ 1.57
HLA-DQB1-208ENST00000484729 PLEKHH2Q8IVE3 1493 aa24.85■■□□□ 1.57
HLA-DQB1-208ENST00000484729 SCAF1Q9H7N4 1312 aaKnown RBP24.84■■□□□ 1.57
HLA-DQB1-208ENST00000484729 ZNF644Q9H582 1327 aaPredicted RBP24.83■■□□□ 1.56
HLA-DQB1-208ENST00000484729 PIP4K2BP78356 416 aa24.81■■□□□ 1.56
HLA-DQB1-208ENST00000484729 A2ML1A8K2U0 1454 aa24.81■■□□□ 1.56
HLA-DQB1-208ENST00000484729 HSPA1LP34931 641 aa24.8■■□□□ 1.56
HLA-DQB1-208ENST00000484729 DNMT1P26358 1616 aaKnown RBP24.79■■□□□ 1.56
HLA-DQB1-208ENST00000484729 ADGBQ8N7X0 1667 aa24.78■■□□□ 1.56
HLA-DQB1-208ENST00000484729 FBXO31Q5XUX0 539 aaPredicted RBP24.77■■□□□ 1.56
HLA-DQB1-208ENST00000484729 MTUS2Q5JR59 1369 aa24.76■■□□□ 1.55
HLA-DQB1-208ENST00000484729 MED1Q15648 1581 aaPredicted RBP24.73■■□□□ 1.55
HLA-DQB1-208ENST00000484729 MBD5Q9P267 1494 aa24.73■■□□□ 1.55
HLA-DQB1-208ENST00000484729 NEURL4Q96JN8 1562 aa24.72■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms