RNA–Protein interactions for RNA: ENST00000484556.1

DDR1-245, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 2

Gene DDR1, Length 1,038 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-245ENST00000484556 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP30.98■■■□□ 2.55
DDR1-245ENST00000484556 ARHGEF12Q9NZN5 1544 aa30.95■■■□□ 2.55
DDR1-245ENST00000484556 MAGI2Q86UL8 1455 aa30.95■■■□□ 2.54
DDR1-245ENST00000484556 CEBPAP49715 358 aaPredicted RBP30.92■■■□□ 2.54
DDR1-245ENST00000484556 PLEKHD1A6NEE1 506 aa30.89■■■□□ 2.54
DDR1-245ENST00000484556 DMRT2Q9Y5R5 561 aa30.87■■■□□ 2.53
DDR1-245ENST00000484556 SCAPERQ9BY12 1400 aa30.83■■■□□ 2.53
DDR1-245ENST00000484556 RANGAP1P46060 587 aaPredicted RBP30.83■■■□□ 2.53
DDR1-245ENST00000484556 C9orf84Q5VXU9 1444 aa30.82■■■□□ 2.52
DDR1-245ENST00000484556 UHRF1BP1Q6BDS2 1440 aa30.82■■■□□ 2.52
DDR1-245ENST00000484556 ATP10AO60312 1499 aa30.82■■■□□ 2.52
DDR1-245ENST00000484556 LTBP4Q8N2S1 1624 aa30.75■■■□□ 2.51
DDR1-245ENST00000484556 PTPRTO14522 1441 aa30.73■■■□□ 2.51
DDR1-245ENST00000484556 CDK13Q14004 1512 aaKnown RBP30.72■■■□□ 2.51
DDR1-245ENST00000484556 PLCH2O75038 1416 aa30.71■■■□□ 2.51
DDR1-245ENST00000484556 SETD1BQ9UPS6 1966 aaKnown RBP30.7■■■□□ 2.51
DDR1-245ENST00000484556 C3P01024 1663 aa30.68■■■□□ 2.5
DDR1-245ENST00000484556 MYO5CQ9NQX4 1742 aa30.65■■■□□ 2.5
DDR1-245ENST00000484556 IQSEC2Q5JU85 1478 aa30.64■■■□□ 2.5
DDR1-245ENST00000484556 DIP2CQ9Y2E4 1556 aa30.6■■■□□ 2.49
DDR1-245ENST00000484556 CSRNP3Q8WYN3 585 aa30.59■■■□□ 2.49
DDR1-245ENST00000484556 ZNF518AQ6AHZ1 1483 aa30.57■■■□□ 2.48
DDR1-245ENST00000484556 KDM5CP41229 1560 aa30.57■■■□□ 2.48
DDR1-245ENST00000484556 NCOA1Q15788 1441 aa30.56■■■□□ 2.48
DDR1-245ENST00000484556 EFCAB2Q5VUJ9 269 aa30.55■■■□□ 2.48
DDR1-245ENST00000484556 ABCA6Q8N139 1617 aa30.54■■■□□ 2.48
DDR1-245ENST00000484556 KIF14Q15058 1648 aa30.52■■■□□ 2.48
DDR1-245ENST00000484556 AFAP1Q8N556 730 aa30.52■■■□□ 2.48
DDR1-245ENST00000484556 MYT1LQ9UL68 1186 aa30.52■■■□□ 2.48
DDR1-245ENST00000484556 REREQ9P2R6 1566 aa30.51■■■□□ 2.47
DDR1-245ENST00000484556 TRAPPC8Q9Y2L5 1435 aa30.48■■■□□ 2.47
DDR1-245ENST00000484556 ARHGAP5Q13017 1502 aa30.48■■■□□ 2.47
DDR1-245ENST00000484556 CAMSAP1Q5T5Y3 1602 aa30.47■■■□□ 2.47
DDR1-245ENST00000484556 UBAP1LF5GYI3 381 aa30.46■■■□□ 2.47
DDR1-245ENST00000484556 ESF1Q9H501 851 aaKnown RBP30.45■■■□□ 2.47
DDR1-245ENST00000484556 ZNF335Q9H4Z2 1342 aaPredicted RBP30.43■■■□□ 2.46
DDR1-245ENST00000484556 AGLP35573 1532 aa30.41■■■□□ 2.46
DDR1-245ENST00000484556 ATP1B4Q9UN42 357 aaPredicted RBP30.4■■■□□ 2.46
DDR1-245ENST00000484556 MLH3Q9UHC1 1453 aa30.38■■■□□ 2.45
DDR1-245ENST00000484556 NCKAP5LQ9HCH0 1330 aa30.36■■■□□ 2.45
DDR1-245ENST00000484556 CDC42BPBQ9Y5S2 1711 aa30.35■■■□□ 2.45
DDR1-245ENST00000484556 MED1Q15648 1581 aaPredicted RBP30.34■■■□□ 2.45
DDR1-245ENST00000484556 CNTLNQ9NXG0 1405 aa30.32■■■□□ 2.44
DDR1-245ENST00000484556 ITSN2Q9NZM3 1697 aa30.3■■■□□ 2.44
DDR1-245ENST00000484556 KIDINS220Q9ULH0 1771 aa30.3■■■□□ 2.44
DDR1-245ENST00000484556 TROQ12816 1431 aaPredicted RBP30.3■■■□□ 2.44
DDR1-245ENST00000484556 MROH2AA6NES4 1674 aa30.3■■■□□ 2.44
DDR1-245ENST00000484556 ABCC1P33527 1531 aa30.29■■■□□ 2.44
DDR1-245ENST00000484556 SUPT6HQ7KZ85 1726 aaKnown RBP30.28■■■□□ 2.44
DDR1-245ENST00000484556 CDK11AQ9UQ88 783 aaPredicted RBP30.28■■■□□ 2.44
DDR1-245ENST00000484556 NPATQ14207 1427 aa30.28■■■□□ 2.44
DDR1-245ENST00000484556 MYO3AQ8NEV4 1616 aa30.26■■■□□ 2.44
DDR1-245ENST00000484556 LRRIQ1Q96JM4 1722 aa30.25■■■□□ 2.43
DDR1-245ENST00000484556 EEA1Q15075 1411 aa30.25■■■□□ 2.43
DDR1-245ENST00000484556 ZNF142P52746 1687 aaPredicted RBP30.25■■■□□ 2.43
DDR1-245ENST00000484556 PREX2Q70Z35 1606 aa30.25■■■□□ 2.43
DDR1-245ENST00000484556 CLIP1P30622 1438 aa30.23■■■□□ 2.43
DDR1-245ENST00000484556 FMN1Q68DA7 1419 aa30.23■■■□□ 2.43
DDR1-245ENST00000484556 SCAF1Q9H7N4 1312 aaKnown RBP30.22■■■□□ 2.43
DDR1-245ENST00000484556 HSPA1LP34931 641 aa30.21■■■□□ 2.43
DDR1-245ENST00000484556 PLA2R1Q13018 1463 aa30.2■■■□□ 2.43
DDR1-245ENST00000484556 ZMYM3Q14202 1370 aa30.2■■■□□ 2.43
DDR1-245ENST00000484556 CLTCQ00610 1675 aaKnown RBP30.2■■■□□ 2.42
DDR1-245ENST00000484556 CEP170BQ9Y4F5 1589 aaPredicted RBP30.19■■■□□ 2.42
DDR1-245ENST00000484556 TCOF1Q13428 1488 aaKnown RBP30.18■■■□□ 2.42
DDR1-245ENST00000484556 PIP4K2BP78356 416 aa30.16■■■□□ 2.42
DDR1-245ENST00000484556 PKD2Q13563 968 aa30.15■■■□□ 2.42
DDR1-245ENST00000484556 ARHGAP35Q9NRY4 1499 aa30.13■■■□□ 2.41
DDR1-245ENST00000484556 PPP6R1Q9UPN7 881 aa30.12■■■□□ 2.41
DDR1-245ENST00000484556 SAMD9LQ8IVG5 1584 aa30.11■■■□□ 2.41
DDR1-245ENST00000484556 EHMT2Q96KQ7 1210 aa30.11■■■□□ 2.41
DDR1-245ENST00000484556 CDC42BPAQ5VT25 1732 aa30.1■■■□□ 2.41
DDR1-245ENST00000484556 PTPRKQ15262 1439 aa30.08■■■□□ 2.41
DDR1-245ENST00000484556 PHF23Q9BUL5 403 aaPredicted RBP30.05■■■□□ 2.4
DDR1-245ENST00000484556 SYCP2Q9BX26 1530 aa30.02■■■□□ 2.4
DDR1-245ENST00000484556 POLR1AO95602 1720 aaPredicted RBP30■■■□□ 2.39
DDR1-245ENST00000484556 PLXNC1O60486 1568 aa30■■■□□ 2.39
DDR1-245ENST00000484556 TOM1O60784 492 aa30■■■□□ 2.39
DDR1-245ENST00000484556 CPS1P31327 1500 aa29.99■■■□□ 2.39
DDR1-245ENST00000484556 DNMT1P26358 1616 aaKnown RBP29.99■■■□□ 2.39
DDR1-245ENST00000484556 UBTFP17480 764 aaKnown RBP29.98■■■□□ 2.39
DDR1-245ENST00000484556 ZNF777Q9ULD5 760 aaPredicted RBP29.98■■■□□ 2.39
DDR1-245ENST00000484556 ATP7AQ04656 1500 aa29.97■■■□□ 2.39
DDR1-245ENST00000484556 NEURL4Q96JN8 1562 aa29.97■■■□□ 2.39
DDR1-245ENST00000484556 SPAG9O60271 1321 aaKnown RBP29.96■■■□□ 2.39
DDR1-245ENST00000484556 A2ML1A8K2U0 1454 aa29.95■■■□□ 2.39
DDR1-245ENST00000484556 INO80Q9ULG1 1556 aaPredicted RBP29.94■■■□□ 2.38
DDR1-245ENST00000484556 SHANK2Q9UPX8 1470 aa29.94■■■□□ 2.38
DDR1-245ENST00000484556 GGT6Q6P531 493 aa29.93■■■□□ 2.38
DDR1-245ENST00000484556 A2MP01023 1474 aa29.93■■■□□ 2.38
DDR1-245ENST00000484556 ALKQ9UM73 1620 aa29.93■■■□□ 2.38
DDR1-245ENST00000484556 HNRNPMP52272 730 aaKnown RBP eCLIP29.9■■■□□ 2.38
DDR1-245ENST00000484556 SENP3Q9H4L4 574 aaPredicted RBP29.9■■■□□ 2.38
DDR1-245ENST00000484556 CCDC18Q5T9S5 1454 aa29.9■■■□□ 2.38
DDR1-245ENST00000484556 VWDEQ8N2E2 1590 aa29.86■■■□□ 2.37
DDR1-245ENST00000484556 GPATCH8Q9UKJ3 1502 aaKnown RBP29.82■■■□□ 2.36
DDR1-245ENST00000484556 ADGBQ8N7X0 1667 aa29.82■■■□□ 2.36
DDR1-245ENST00000484556 CASKIN1Q8WXD9 1431 aa29.81■■■□□ 2.36
DDR1-245ENST00000484556 TNRQ92752 1358 aa29.77■■■□□ 2.36
DDR1-245ENST00000484556 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP29.75■■■□□ 2.35
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms