RNA–Protein interactions for RNA: ENST00000483544.1

LINC00477-201, long intergenic non-protein coding RNA 477, humanhuman

TSL 2 BASIC

Gene LINC00477, Length 1,710 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00477-201ENST00000483544 SUPT16HQ9Y5B9 1047 aaKnown RBP17.47■□□□□ 0.39
LINC00477-201ENST00000483544 ADCY10Q96PN6 1610 aa17.47■□□□□ 0.39
LINC00477-201ENST00000483544 NUP153P49790 1475 aaKnown RBP17.46■□□□□ 0.39
LINC00477-201ENST00000483544 KDM5BQ9UGL1 1544 aa17.44■□□□□ 0.38
LINC00477-201ENST00000483544 DAPK1P53355 1430 aa17.43■□□□□ 0.38
LINC00477-201ENST00000483544 OSCARQ8IYS5 282 aa17.43■□□□□ 0.38
LINC00477-201ENST00000483544 TROQ12816 1431 aaPredicted RBP17.42■□□□□ 0.38
LINC00477-201ENST00000483544 CARMIL2Q6F5E8 1435 aa17.42■□□□□ 0.38
LINC00477-201ENST00000483544 ADGBQ8N7X0 1667 aa17.41■□□□□ 0.38
LINC00477-201ENST00000483544 DDX10Q13206 875 aaKnown RBP17.41■□□□□ 0.38
LINC00477-201ENST00000483544 CEP170Q5SW79 1584 aa17.4■□□□□ 0.38
LINC00477-201ENST00000483544 NUP160Q12769 1436 aa17.4■□□□□ 0.38
LINC00477-201ENST00000483544 ANP32CO43423 234 aa17.38■□□□□ 0.37
LINC00477-201ENST00000483544 RRP7BPQ9NSQ0 103 aa17.38■□□□□ 0.37
LINC00477-201ENST00000483544 ABCC5O15440 1437 aa17.37■□□□□ 0.37
LINC00477-201ENST00000483544 DENND4BO75064 1496 aaPredicted RBP17.37■□□□□ 0.37
LINC00477-201ENST00000483544 KDM6BO15054 1643 aa17.36■□□□□ 0.37
LINC00477-201ENST00000483544 MPHOSPH9Q99550 1183 aa17.35■□□□□ 0.37
LINC00477-201ENST00000483544 CROCC2H7BZ55 1655 aa17.35■□□□□ 0.37
LINC00477-201ENST00000483544 ADGRL2O95490 1459 aa17.35■□□□□ 0.37
LINC00477-201ENST00000483544 CHMP7Q8WUX9 453 aaPredicted RBP17.34■□□□□ 0.37
LINC00477-201ENST00000483544 TRIM52Q96A61 297 aa17.34■□□□□ 0.37
LINC00477-201ENST00000483544 PKNOX2Q96KN3 472 aa17.33■□□□□ 0.37
LINC00477-201ENST00000483544 CHIC2Q9UKJ5 165 aa17.33■□□□□ 0.36
LINC00477-201ENST00000483544 RIMBP3CA6NJZ7 1639 aa17.32■□□□□ 0.36
LINC00477-201ENST00000483544 RIMBP3BA6NNM3 1639 aa17.32■□□□□ 0.36
LINC00477-201ENST00000483544 RIMBP3Q9UFD9 1639 aa17.32■□□□□ 0.36
LINC00477-201ENST00000483544 RPRD2Q5VT52 1461 aaKnown RBP17.32■□□□□ 0.36
LINC00477-201ENST00000483544 CAMSAP2Q08AD1 1489 aa17.31■□□□□ 0.36
LINC00477-201ENST00000483544 ANKRD30BQ9BXX2 1392 aa17.31■□□□□ 0.36
LINC00477-201ENST00000483544 ABCA8O94911 1581 aa17.3■□□□□ 0.36
LINC00477-201ENST00000483544 POLR1AO95602 1720 aaPredicted RBP17.29■□□□□ 0.36
LINC00477-201ENST00000483544 GPATCH8Q9UKJ3 1502 aaKnown RBP17.29■□□□□ 0.36
LINC00477-201ENST00000483544 SHANK2Q9UPX8 1470 aa17.28■□□□□ 0.36
LINC00477-201ENST00000483544 KIF14Q15058 1648 aa17.27■□□□□ 0.36
LINC00477-201ENST00000483544 EIF4G2P78344 907 aaKnown RBP eCLIP17.27■□□□□ 0.35
LINC00477-201ENST00000483544 JPH4Q96JJ6 628 aa17.27■□□□□ 0.35
LINC00477-201ENST00000483544 SALL2Q9Y467 1007 aaPredicted RBP17.27■□□□□ 0.35
LINC00477-201ENST00000483544 PLB1Q6P1J6 1458 aa17.26■□□□□ 0.35
LINC00477-201ENST00000483544 NCOA1Q15788 1441 aa17.25■□□□□ 0.35
LINC00477-201ENST00000483544 PRG4Q92954 1404 aaPredicted RBP17.25■□□□□ 0.35
LINC00477-201ENST00000483544 CFDP1Q9UEE9 299 aaPredicted RBP17.24■□□□□ 0.35
LINC00477-201ENST00000483544 TEX14Q8IWB6 1497 aa17.24■□□□□ 0.35
LINC00477-201ENST00000483544 ANKRD30AQ9BXX3 1397 aa17.24■□□□□ 0.35
LINC00477-201ENST00000483544 CDC42BPAQ5VT25 1732 aa17.24■□□□□ 0.35
LINC00477-201ENST00000483544 HSPA5P11021 654 aaKnown RBP17.21■□□□□ 0.35
LINC00477-201ENST00000483544 TRHP20396 242 aaPredicted RBP17.21■□□□□ 0.35
LINC00477-201ENST00000483544 KCNH8Q96L42 1107 aa17.21■□□□□ 0.35
LINC00477-201ENST00000483544 PODXL2Q9NZ53 605 aa17.21■□□□□ 0.35
LINC00477-201ENST00000483544 PZPP20742 1482 aa17.21■□□□□ 0.34
LINC00477-201ENST00000483544 ABCC10Q5T3U5 1492 aa17.21■□□□□ 0.34
LINC00477-201ENST00000483544 L3MBTL2Q969R5 705 aa17.2■□□□□ 0.34
LINC00477-201ENST00000483544 ARHGEF5Q12774 1597 aa17.2■□□□□ 0.34
LINC00477-201ENST00000483544 PLEKHD1A6NEE1 506 aa17.19■□□□□ 0.34
LINC00477-201ENST00000483544 DEKP35659 375 aaKnown RBP17.19■□□□□ 0.34
LINC00477-201ENST00000483544 FANCIQ9NVI1 1328 aa17.19■□□□□ 0.34
LINC00477-201ENST00000483544 CNTLNQ9NXG0 1405 aa17.19■□□□□ 0.34
LINC00477-201ENST00000483544 KIAA1107Q9UPP5 1409 aa17.19■□□□□ 0.34
LINC00477-201ENST00000483544 KDM5DQ9BY66 1539 aa17.19■□□□□ 0.34
LINC00477-201ENST00000483544 SLC4A1APQ9BWU0 796 aaKnown RBP17.18■□□□□ 0.34
LINC00477-201ENST00000483544 ARID3CA6NKF2 412 aa17.18■□□□□ 0.34
LINC00477-201ENST00000483544 HIRIP3Q9BW71 556 aaPredicted RBP17.18■□□□□ 0.34
LINC00477-201ENST00000483544 ZNF644Q9H582 1327 aaPredicted RBP17.18■□□□□ 0.34
LINC00477-201ENST00000483544 ATP10BO94823 1461 aa17.17■□□□□ 0.34
LINC00477-201ENST00000483544 RBM19Q9Y4C8 960 aaKnown RBP17.17■□□□□ 0.34
LINC00477-201ENST00000483544 WASHC2AQ641Q2 1341 aa17.15■□□□□ 0.34
LINC00477-201ENST00000483544 MBD5Q9P267 1494 aa17.14■□□□□ 0.33
LINC00477-201ENST00000483544 PLEKHG5O94827 1062 aa17.14■□□□□ 0.33
LINC00477-201ENST00000483544 SPATA31E1Q6ZUB1 1445 aa17.14■□□□□ 0.33
LINC00477-201ENST00000483544 CCDC7Q96M83 1385 aa17.13■□□□□ 0.33
LINC00477-201ENST00000483544 ANKRD50Q9ULJ7 1429 aa17.13■□□□□ 0.33
LINC00477-201ENST00000483544 NEFLP07196 543 aa17.13■□□□□ 0.33
LINC00477-201ENST00000483544 RSPH4AQ5TD94 716 aa17.13■□□□□ 0.33
LINC00477-201ENST00000483544 FBLN2P98095 1184 aa17.12■□□□□ 0.33
LINC00477-201ENST00000483544 ARHGEF12Q9NZN5 1544 aa17.11■□□□□ 0.33
LINC00477-201ENST00000483544 C9orf84Q5VXU9 1444 aa17.11■□□□□ 0.33
LINC00477-201ENST00000483544 ARID4BQ4LE39 1312 aaPredicted RBP17.11■□□□□ 0.33
LINC00477-201ENST00000483544 SHROOM2Q13796 1616 aa17.1■□□□□ 0.33
LINC00477-201ENST00000483544 PREX2Q70Z35 1606 aa17.1■□□□□ 0.33
LINC00477-201ENST00000483544 PTPRGP23470 1445 aa17.09■□□□□ 0.33
LINC00477-201ENST00000483544 UHRF1BP1Q6BDS2 1440 aa17.09■□□□□ 0.33
LINC00477-201ENST00000483544 MAST1Q9Y2H9 1570 aa17.07■□□□□ 0.32
LINC00477-201ENST00000483544 MSH5O43196 834 aa17.07■□□□□ 0.32
LINC00477-201ENST00000483544 TSPY4P0CV99 314 aa17.07■□□□□ 0.32
LINC00477-201ENST00000483544 TSPY10P0CW01 314 aa17.07■□□□□ 0.32
LINC00477-201ENST00000483544 FOXD1Q16676 465 aa17.06■□□□□ 0.32
LINC00477-201ENST00000483544 NBPF8Q3BBV2 869 aa17.06■□□□□ 0.32
LINC00477-201ENST00000483544 CHD1O14646 1710 aa17.05■□□□□ 0.32
LINC00477-201ENST00000483544 CDC42BPBQ9Y5S2 1711 aa17.05■□□□□ 0.32
LINC00477-201ENST00000483544 CCDC141Q6ZP82 1450 aa17.05■□□□□ 0.32
LINC00477-201ENST00000483544 CYB5RLQ6IPT4 315 aa17.04■□□□□ 0.32
LINC00477-201ENST00000483544 ZNF777Q9ULD5 760 aaPredicted RBP17.04■□□□□ 0.32
LINC00477-201ENST00000483544 ILDR1Q86SU0 546 aaPredicted RBP17.03■□□□□ 0.32
LINC00477-201ENST00000483544 RALGAPBQ86X10 1494 aa17.03■□□□□ 0.32
LINC00477-201ENST00000483544 PLEKHH2Q8IVE3 1493 aa17.03■□□□□ 0.32
LINC00477-201ENST00000483544 PKD2Q13563 968 aa17.02■□□□□ 0.32
LINC00477-201ENST00000483544 KDM5CP41229 1560 aa17.01■□□□□ 0.31
LINC00477-201ENST00000483544 SAMD9LQ8IVG5 1584 aa17.01■□□□□ 0.31
LINC00477-201ENST00000483544 FKBP8Q14318 412 aa17.01■□□□□ 0.31
LINC00477-201ENST00000483544 CCDC136Q96JN2 1154 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms