RNA–Protein interactions for RNA: ENST00000483039.5

TNFSF13-208, Transcript of TNF superfamily member 13, humanhuman

TSL 2 BASIC

Gene TNFSF13, Length 959 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13-208ENST00000483039 ARHGEF12Q9NZN5 1544 aa30.41■■■□□ 2.46
TNFSF13-208ENST00000483039 PREX1Q8TCU6 1659 aa30.39■■■□□ 2.46
TNFSF13-208ENST00000483039 PLCH2O75038 1416 aa30.39■■■□□ 2.46
TNFSF13-208ENST00000483039 ATP10AO60312 1499 aa30.38■■■□□ 2.45
TNFSF13-208ENST00000483039 EEA1Q15075 1411 aa30.35■■■□□ 2.45
TNFSF13-208ENST00000483039 C9orf84Q5VXU9 1444 aa30.35■■■□□ 2.45
TNFSF13-208ENST00000483039 DMRT2Q9Y5R5 561 aa30.34■■■□□ 2.45
TNFSF13-208ENST00000483039 CDK13Q14004 1512 aaKnown RBP30.32■■■□□ 2.44
TNFSF13-208ENST00000483039 DISP3Q9P2K9 1392 aa30.31■■■□□ 2.44
TNFSF13-208ENST00000483039 CEBPAP49715 358 aaPredicted RBP30.3■■■□□ 2.44
TNFSF13-208ENST00000483039 STRCQ7RTU9 1775 aa30.28■■■□□ 2.44
TNFSF13-208ENST00000483039 EFCAB2Q5VUJ9 269 aa30.28■■■□□ 2.44
TNFSF13-208ENST00000483039 ILDR2Q71H61 639 aa30.28■■■□□ 2.44
TNFSF13-208ENST00000483039 SETD1BQ9UPS6 1966 aaKnown RBP30.27■■■□□ 2.44
TNFSF13-208ENST00000483039 MYO5CQ9NQX4 1742 aa30.25■■■□□ 2.43
TNFSF13-208ENST00000483039 SOCS7O14512 581 aa30.25■■■□□ 2.43
TNFSF13-208ENST00000483039 UHRF1BP1Q6BDS2 1440 aa30.23■■■□□ 2.43
TNFSF13-208ENST00000483039 ZNF518AQ6AHZ1 1483 aa30.21■■■□□ 2.43
TNFSF13-208ENST00000483039 KDM5CP41229 1560 aa30.16■■■□□ 2.42
TNFSF13-208ENST00000483039 CDK11AQ9UQ88 783 aaPredicted RBP30.16■■■□□ 2.42
TNFSF13-208ENST00000483039 PTPRTO14522 1441 aa30.14■■■□□ 2.42
TNFSF13-208ENST00000483039 AFAP1Q8N556 730 aa30.13■■■□□ 2.41
TNFSF13-208ENST00000483039 ATP1B4Q9UN42 357 aaPredicted RBP30.13■■■□□ 2.41
TNFSF13-208ENST00000483039 FMN1Q68DA7 1419 aa30.12■■■□□ 2.41
TNFSF13-208ENST00000483039 REREQ9P2R6 1566 aa30.11■■■□□ 2.41
TNFSF13-208ENST00000483039 DIP2CQ9Y2E4 1556 aa30.11■■■□□ 2.41
TNFSF13-208ENST00000483039 KIF14Q15058 1648 aa30.11■■■□□ 2.41
TNFSF13-208ENST00000483039 ARHGAP5Q13017 1502 aa30.1■■■□□ 2.41
TNFSF13-208ENST00000483039 MYT1LQ9UL68 1186 aa30.09■■■□□ 2.41
TNFSF13-208ENST00000483039 C3P01024 1663 aa30.07■■■□□ 2.41
TNFSF13-208ENST00000483039 SPATA31D1Q6ZQQ2 1576 aa30.07■■■□□ 2.4
TNFSF13-208ENST00000483039 TROQ12816 1431 aaPredicted RBP30.06■■■□□ 2.4
TNFSF13-208ENST00000483039 MLH3Q9UHC1 1453 aa30.05■■■□□ 2.4
TNFSF13-208ENST00000483039 LTBP4Q8N2S1 1624 aa30.03■■■□□ 2.4
TNFSF13-208ENST00000483039 AGLP35573 1532 aa30.02■■■□□ 2.4
TNFSF13-208ENST00000483039 IQSEC2Q5JU85 1478 aa30.02■■■□□ 2.4
TNFSF13-208ENST00000483039 ESF1Q9H501 851 aaKnown RBP30.02■■■□□ 2.4
TNFSF13-208ENST00000483039 ABCA6Q8N139 1617 aa30.02■■■□□ 2.4
TNFSF13-208ENST00000483039 CLIP1P30622 1438 aa30.02■■■□□ 2.4
TNFSF13-208ENST00000483039 TRAPPC8Q9Y2L5 1435 aa30.02■■■□□ 2.4
TNFSF13-208ENST00000483039 ARHGAP35Q9NRY4 1499 aa29.98■■■□□ 2.39
TNFSF13-208ENST00000483039 CDC42BPBQ9Y5S2 1711 aa29.97■■■□□ 2.39
TNFSF13-208ENST00000483039 NCOA1Q15788 1441 aa29.96■■■□□ 2.39
TNFSF13-208ENST00000483039 UBTFP17480 764 aaKnown RBP29.94■■■□□ 2.38
TNFSF13-208ENST00000483039 CNTLNQ9NXG0 1405 aa29.94■■■□□ 2.38
TNFSF13-208ENST00000483039 ABCC1P33527 1531 aa29.91■■■□□ 2.38
TNFSF13-208ENST00000483039 LRRIQ1Q96JM4 1722 aa29.9■■■□□ 2.38
TNFSF13-208ENST00000483039 PREX2Q70Z35 1606 aa29.89■■■□□ 2.38
TNFSF13-208ENST00000483039 ITSN2Q9NZM3 1697 aa29.88■■■□□ 2.37
TNFSF13-208ENST00000483039 KIDINS220Q9ULH0 1771 aa29.87■■■□□ 2.37
TNFSF13-208ENST00000483039 NPATQ14207 1427 aa29.86■■■□□ 2.37
TNFSF13-208ENST00000483039 CAMSAP1Q5T5Y3 1602 aa29.85■■■□□ 2.37
TNFSF13-208ENST00000483039 EHMT2Q96KQ7 1210 aa29.84■■■□□ 2.37
TNFSF13-208ENST00000483039 MROH2AA6NES4 1674 aa29.83■■■□□ 2.37
TNFSF13-208ENST00000483039 ZMYM3Q14202 1370 aa29.77■■■□□ 2.36
TNFSF13-208ENST00000483039 CCDC18Q5T9S5 1454 aa29.75■■■□□ 2.35
TNFSF13-208ENST00000483039 CDC42BPAQ5VT25 1732 aa29.75■■■□□ 2.35
TNFSF13-208ENST00000483039 ZNF335Q9H4Z2 1342 aaPredicted RBP29.74■■■□□ 2.35
TNFSF13-208ENST00000483039 NCKAP5LQ9HCH0 1330 aa29.74■■■□□ 2.35
TNFSF13-208ENST00000483039 SAMD9LQ8IVG5 1584 aa29.74■■■□□ 2.35
TNFSF13-208ENST00000483039 UBAP1LF5GYI3 381 aa29.73■■■□□ 2.35
TNFSF13-208ENST00000483039 PKD2Q13563 968 aa29.71■■■□□ 2.35
TNFSF13-208ENST00000483039 CASKIN1Q8WXD9 1431 aa29.71■■■□□ 2.35
TNFSF13-208ENST00000483039 PLA2R1Q13018 1463 aa29.7■■■□□ 2.35
TNFSF13-208ENST00000483039 ZNF142P52746 1687 aaPredicted RBP29.69■■■□□ 2.34
TNFSF13-208ENST00000483039 SUPT6HQ7KZ85 1726 aaKnown RBP29.68■■■□□ 2.34
TNFSF13-208ENST00000483039 SPAG9O60271 1321 aaKnown RBP29.68■■■□□ 2.34
TNFSF13-208ENST00000483039 ZNF777Q9ULD5 760 aaPredicted RBP29.66■■■□□ 2.34
TNFSF13-208ENST00000483039 MYO3AQ8NEV4 1616 aa29.66■■■□□ 2.34
TNFSF13-208ENST00000483039 CLTCQ00610 1675 aaKnown RBP29.66■■■□□ 2.34
TNFSF13-208ENST00000483039 TCOF1Q13428 1488 aaKnown RBP29.65■■■□□ 2.34
TNFSF13-208ENST00000483039 SYCP2Q9BX26 1530 aa29.64■■■□□ 2.34
TNFSF13-208ENST00000483039 CEP170BQ9Y4F5 1589 aaPredicted RBP29.64■■■□□ 2.33
TNFSF13-208ENST00000483039 PTPRKQ15262 1439 aa29.62■■■□□ 2.33
TNFSF13-208ENST00000483039 ATP7AQ04656 1500 aa29.61■■■□□ 2.33
TNFSF13-208ENST00000483039 PLXNC1O60486 1568 aa29.6■■■□□ 2.33
TNFSF13-208ENST00000483039 HNRNPMP52272 730 aaKnown RBP eCLIP29.6■■■□□ 2.33
TNFSF13-208ENST00000483039 A2MP01023 1474 aa29.59■■■□□ 2.33
TNFSF13-208ENST00000483039 GPATCH8Q9UKJ3 1502 aaKnown RBP29.59■■■□□ 2.33
TNFSF13-208ENST00000483039 KIAA1107Q9UPP5 1409 aa29.57■■■□□ 2.32
TNFSF13-208ENST00000483039 PPP6R1Q9UPN7 881 aa29.57■■■□□ 2.32
TNFSF13-208ENST00000483039 INO80Q9ULG1 1556 aaPredicted RBP29.56■■■□□ 2.32
TNFSF13-208ENST00000483039 PLEKHH2Q8IVE3 1493 aa29.55■■■□□ 2.32
TNFSF13-208ENST00000483039 GGT6Q6P531 493 aa29.54■■■□□ 2.32
TNFSF13-208ENST00000483039 FYCO1Q9BQS8 1478 aa29.54■■■□□ 2.32
TNFSF13-208ENST00000483039 A2ML1A8K2U0 1454 aa29.49■■■□□ 2.31
TNFSF13-208ENST00000483039 CFDP1Q9UEE9 299 aaPredicted RBP29.49■■■□□ 2.31
TNFSF13-208ENST00000483039 ADGBQ8N7X0 1667 aa29.47■■■□□ 2.31
TNFSF13-208ENST00000483039 DNMT1P26358 1616 aaKnown RBP29.46■■■□□ 2.31
TNFSF13-208ENST00000483039 HSPA1LP34931 641 aa29.46■■■□□ 2.31
TNFSF13-208ENST00000483039 MED1Q15648 1581 aaPredicted RBP29.45■■■□□ 2.31
TNFSF13-208ENST00000483039 TOM1O60784 492 aa29.44■■■□□ 2.3
TNFSF13-208ENST00000483039 CPS1P31327 1500 aa29.44■■■□□ 2.3
TNFSF13-208ENST00000483039 SCAF1Q9H7N4 1312 aaKnown RBP29.44■■■□□ 2.3
TNFSF13-208ENST00000483039 CCNB3Q8WWL7 1395 aa29.43■■■□□ 2.3
TNFSF13-208ENST00000483039 PIP4K2BP78356 416 aa29.41■■■□□ 2.3
TNFSF13-208ENST00000483039 POLR1AO95602 1720 aaPredicted RBP29.4■■■□□ 2.3
TNFSF13-208ENST00000483039 SHANK2Q9UPX8 1470 aa29.37■■■□□ 2.29
TNFSF13-208ENST00000483039 NEURL4Q96JN8 1562 aa29.37■■■□□ 2.29
TNFSF13-208ENST00000483039 CHIC1Q5VXU3 224 aa29.36■■■□□ 2.29
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms