RNA–Protein interactions for RNA: ENST00000482556.5

PREX1-202, Transcript of phosphatidylinositol-3,4,5-trisphosphate dependent Rac exchange factor 1, humanhuman

TSL 2

Gene PREX1, Length 4,682 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PREX1-202ENST00000482556 CUX1P39880 1505 aa16.1■□□□□ 0.17
PREX1-202ENST00000482556 CC2D1BQ5T0F9 858 aaKnown RBP16.1■□□□□ 0.17
PREX1-202ENST00000482556 CHMP4BQ9H444 224 aaKnown RBP16.1■□□□□ 0.17
PREX1-202ENST00000482556 BECN1Q14457 450 aa16.1■□□□□ 0.17
PREX1-202ENST00000482556 ANKRD30AQ9BXX3 1397 aa16.09■□□□□ 0.17
PREX1-202ENST00000482556 PRKRIP1Q9H875 184 aaPredicted RBP16.09■□□□□ 0.17
PREX1-202ENST00000482556 MS4A1P11836 297 aa16.09■□□□□ 0.17
PREX1-202ENST00000482556 CFTRP13569 1480 aa16.08■□□□□ 0.16
PREX1-202ENST00000482556 LAS1LQ9Y4W2 734 aaKnown RBP16.06■□□□□ 0.16
PREX1-202ENST00000482556 PPM1GO15355 546 aaPredicted RBP16.05■□□□□ 0.16
PREX1-202ENST00000482556 UACAQ9BZF9 1416 aa16.05■□□□□ 0.16
PREX1-202ENST00000482556 FTSJ3Q8IY81 847 aaKnown RBP16.04■□□□□ 0.16
PREX1-202ENST00000482556 ZBTB7CA1YPR0 619 aa16.04■□□□□ 0.16
PREX1-202ENST00000482556 BICRAQ9NZM4 1560 aa16.04■□□□□ 0.16
PREX1-202ENST00000482556 NUP155O75694 1391 aa16.03■□□□□ 0.16
PREX1-202ENST00000482556 DEKP35659 375 aaKnown RBP16.02■□□□□ 0.16
PREX1-202ENST00000482556 CASKIN1Q8WXD9 1431 aa16.02■□□□□ 0.16
PREX1-202ENST00000482556 WDR97A6NE52 1622 aa16.02■□□□□ 0.15
PREX1-202ENST00000482556 MYOM3Q5VTT5 1437 aa16.01■□□□□ 0.15
PREX1-202ENST00000482556 HAP1P54257 671 aaPredicted RBP16.01■□□□□ 0.15
PREX1-202ENST00000482556 TIAM1Q13009 1591 aa16.01■□□□□ 0.15
PREX1-202ENST00000482556 WASHC2AQ641Q2 1341 aa16.01■□□□□ 0.15
PREX1-202ENST00000482556 NEUROD2Q15784 382 aa15.98■□□□□ 0.15
PREX1-202ENST00000482556 JPH4Q96JJ6 628 aa15.98■□□□□ 0.15
PREX1-202ENST00000482556 ZBED9Q6R2W3 1325 aa15.98■□□□□ 0.15
PREX1-202ENST00000482556 GGT6Q6P531 493 aa15.98■□□□□ 0.15
PREX1-202ENST00000482556 RCAN3Q9UKA8 241 aa15.98■□□□□ 0.15
PREX1-202ENST00000482556 RGS3P49796 1198 aa15.97■□□□□ 0.15
PREX1-202ENST00000482556 CASC1Q6TDU7 716 aa15.97■□□□□ 0.15
PREX1-202ENST00000482556 NCOA2Q15596 1464 aa15.96■□□□□ 0.15
PREX1-202ENST00000482556 GOLGA6L22H0YM25 854 aa15.95■□□□□ 0.14
PREX1-202ENST00000482556 RALBP1Q15311 655 aa15.95■□□□□ 0.14
PREX1-202ENST00000482556 U2SURPO15042 1029 aaKnown RBP15.95■□□□□ 0.14
PREX1-202ENST00000482556 SRPK2P78362 688 aaKnown RBP15.95■□□□□ 0.14
PREX1-202ENST00000482556 FYCO1Q9BQS8 1478 aa15.95■□□□□ 0.14
PREX1-202ENST00000482556 ROCK2O75116 1388 aaKnown RBP15.95■□□□□ 0.14
PREX1-202ENST00000482556 KTN1Q86UP2 1357 aaKnown RBP15.95■□□□□ 0.14
PREX1-202ENST00000482556 A0A0G2JS52 829 aa15.95■□□□□ 0.14
PREX1-202ENST00000482556 MORC1Q86VD1 984 aa15.95■□□□□ 0.14
PREX1-202ENST00000482556 ZNF644Q9H582 1327 aaPredicted RBP15.95■□□□□ 0.14
PREX1-202ENST00000482556 CCDC7Q96M83 1385 aa15.94■□□□□ 0.14
PREX1-202ENST00000482556 GAPVD1Q14C86 1478 aa15.94■□□□□ 0.14
PREX1-202ENST00000482556 TRHP20396 242 aaPredicted RBP15.94■□□□□ 0.14
PREX1-202ENST00000482556 ST20-MTHFSA0A0A6YYL1 179 aa15.93■□□□□ 0.14
PREX1-202ENST00000482556 ARXQ96QS3 562 aa15.93■□□□□ 0.14
PREX1-202ENST00000482556 KIF7Q2M1P5 1343 aa15.93■□□□□ 0.14
PREX1-202ENST00000482556 PEG3Q9GZU2 1588 aa15.92■□□□□ 0.14
PREX1-202ENST00000482556 NCLP19338 710 aaKnown RBP15.92■□□□□ 0.14
PREX1-202ENST00000482556 FANCIQ9NVI1 1328 aa15.92■□□□□ 0.14
PREX1-202ENST00000482556 TNNT2P45379 298 aaPredicted RBP15.92■□□□□ 0.14
PREX1-202ENST00000482556 HNRNPMP52272 730 aaKnown RBP eCLIP15.92■□□□□ 0.14
PREX1-202ENST00000482556 PLEKHG5O94827 1062 aa15.91■□□□□ 0.14
PREX1-202ENST00000482556 HMGXB3Q12766 1538 aa15.91■□□□□ 0.14
PREX1-202ENST00000482556 HDGFL2Q7Z4V5 671 aaPredicted RBP15.91■□□□□ 0.14
PREX1-202ENST00000482556 SPAG9O60271 1321 aaKnown RBP15.91■□□□□ 0.14
PREX1-202ENST00000482556 USP47Q96K76 1375 aa15.9■□□□□ 0.14
PREX1-202ENST00000482556 CNTLNQ9NXG0 1405 aa15.9■□□□□ 0.14
PREX1-202ENST00000482556 EIF3AQ14152 1382 aaKnown RBP15.9■□□□□ 0.14
PREX1-202ENST00000482556 FRAT1Q92837 279 aaPredicted RBP15.89■□□□□ 0.14
PREX1-202ENST00000482556 MLECQ14165 292 aa15.89■□□□□ 0.13
PREX1-202ENST00000482556 LMOD2Q6P5Q4 547 aa15.89■□□□□ 0.13
PREX1-202ENST00000482556 IPO9Q96P70 1041 aaKnown RBP15.89■□□□□ 0.13
PREX1-202ENST00000482556 RTN4Q9NQC3 1192 aaKnown RBP15.89■□□□□ 0.13
PREX1-202ENST00000482556 NLRP13Q86W25 1043 aa15.88■□□□□ 0.13
PREX1-202ENST00000482556 HFM1A2PYH4 1435 aa15.88■□□□□ 0.13
PREX1-202ENST00000482556 KIF3BO15066 747 aa15.88■□□□□ 0.13
PREX1-202ENST00000482556 CCDC184Q52MB2 194 aa15.88■□□□□ 0.13
PREX1-202ENST00000482556 TCERG1O14776 1098 aaKnown RBP15.87■□□□□ 0.13
PREX1-202ENST00000482556 UNC13AQ9UPW8 1703 aa15.87■□□□□ 0.13
PREX1-202ENST00000482556 KIF15Q9NS87 1388 aa15.85■□□□□ 0.13
PREX1-202ENST00000482556 MYBBP1AQ9BQG0 1328 aaKnown RBP15.85■□□□□ 0.13
PREX1-202ENST00000482556 CALD1Q05682 793 aaKnown RBP15.85■□□□□ 0.13
PREX1-202ENST00000482556 NBPF8Q3BBV2 869 aa15.84■□□□□ 0.13
PREX1-202ENST00000482556 CFAP44Q96MT7 982 aa15.83■□□□□ 0.13
PREX1-202ENST00000482556 EFCAB5A4FU69 1503 aa15.83■□□□□ 0.12
PREX1-202ENST00000482556 PTPRGP23470 1445 aa15.83■□□□□ 0.12
PREX1-202ENST00000482556 EXOC6Q8TAG9 804 aa15.83■□□□□ 0.12
PREX1-202ENST00000482556 CHMP4AQ9BY43 222 aa15.82■□□□□ 0.12
PREX1-202ENST00000482556 NESP48681 1621 aa15.82■□□□□ 0.12
PREX1-202ENST00000482556 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.82■□□□□ 0.12
PREX1-202ENST00000482556 PCF11O94913 1555 aaKnown RBP15.82■□□□□ 0.12
PREX1-202ENST00000482556 POLA1P09884 1462 aaPredicted RBP15.82■□□□□ 0.12
PREX1-202ENST00000482556 NAIPQ13075 1403 aa15.81■□□□□ 0.12
PREX1-202ENST00000482556 IPO8O15397 1037 aaKnown RBP15.81■□□□□ 0.12
PREX1-202ENST00000482556 BIVM-ERCC5R4GMW8 1640 aa15.81■□□□□ 0.12
PREX1-202ENST00000482556 PDE3BQ13370 1112 aa15.8■□□□□ 0.12
PREX1-202ENST00000482556 STK26Q9P289 416 aa15.8■□□□□ 0.12
PREX1-202ENST00000482556 PLIN1O60240 522 aa15.8■□□□□ 0.12
PREX1-202ENST00000482556 SAFB2Q14151 953 aaKnown RBP eCLIP15.8■□□□□ 0.12
PREX1-202ENST00000482556 MAP3K1Q13233 1512 aa15.79■□□□□ 0.12
PREX1-202ENST00000482556 RRP1P56182 461 aaKnown RBP15.79■□□□□ 0.12
PREX1-202ENST00000482556 TERF2IPQ9NYB0 399 aa15.79■□□□□ 0.12
PREX1-202ENST00000482556 TOPBP1Q92547 1522 aa15.79■□□□□ 0.12
PREX1-202ENST00000482556 AQRO60306 1485 aaKnown RBP eCLIP15.79■□□□□ 0.12
PREX1-202ENST00000482556 MAPKBP1O60336 1514 aa15.78■□□□□ 0.12
PREX1-202ENST00000482556 WASHC2CQ9Y4E1 1318 aa15.78■□□□□ 0.12
PREX1-202ENST00000482556 RTF1Q92541 710 aaKnown RBP15.78■□□□□ 0.12
PREX1-202ENST00000482556 PANK3Q9H999 370 aa15.77■□□□□ 0.12
PREX1-202ENST00000482556 U2AF1L5P0DN76 240 aaPredicted RBP15.76■□□□□ 0.11
PREX1-202ENST00000482556 U2AF1Q01081 240 aaKnown RBP eCLIP15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms