RNA–Protein interactions for RNA: ENST00000482270.5

LIMK2-209, Transcript of LIM domain kinase 2, humanhuman

TSL 2

Gene LIMK2, Length 805 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2-209ENST00000482270 OCEL1Q9H607 264 aa16.5■□□□□ 0.23
LIMK2-209ENST00000482270 PDS5BQ9NTI5 1447 aa16.5■□□□□ 0.23
LIMK2-209ENST00000482270 POTEB2H3BUK9 544 aa16.47■□□□□ 0.23
LIMK2-209ENST00000482270 SOX12O15370 315 aa16.46■□□□□ 0.23
LIMK2-209ENST00000482270 DPY19L2Q6NUT2 758 aa16.46■□□□□ 0.23
LIMK2-209ENST00000482270 PDCD7Q8N8D1 485 aaKnown RBP16.46■□□□□ 0.23
LIMK2-209ENST00000482270 MFRPQ9BY79 579 aa16.46■□□□□ 0.23
LIMK2-209ENST00000482270 NKX1-1Q15270 411 aaPredicted RBP16.45■□□□□ 0.22
LIMK2-209ENST00000482270 PRDM2Q13029 1718 aa16.42■□□□□ 0.22
LIMK2-209ENST00000482270 NLRP6P59044 892 aa16.42■□□□□ 0.22
LIMK2-209ENST00000482270 LHX8Q68G74 356 aa16.42■□□□□ 0.22
LIMK2-209ENST00000482270 MRC2Q9UBG0 1479 aa16.41■□□□□ 0.22
LIMK2-209ENST00000482270 MS4A4AQ96JQ5 239 aa16.4■□□□□ 0.22
LIMK2-209ENST00000482270 FANCD2Q9BXW9 1451 aa16.38■□□□□ 0.21
LIMK2-209ENST00000482270 CEP164Q9UPV0 1460 aa16.38■□□□□ 0.21
LIMK2-209ENST00000482270 CFTRP13569 1480 aa16.37■□□□□ 0.21
LIMK2-209ENST00000482270 WDR62O43379 1518 aa16.37■□□□□ 0.21
LIMK2-209ENST00000482270 FBXO22Q8NEZ5 403 aa16.37■□□□□ 0.21
LIMK2-209ENST00000482270 POTEJP0CG39 1038 aa16.36■□□□□ 0.21
LIMK2-209ENST00000482270 CCDC88BA6NC98 1476 aa16.35■□□□□ 0.21
LIMK2-209ENST00000482270 ILDR1Q86SU0 546 aaPredicted RBP16.34■□□□□ 0.21
LIMK2-209ENST00000482270 G3V3G9 751 aa16.32■□□□□ 0.2
LIMK2-209ENST00000482270 BBXQ8WY36 941 aaPredicted RBP16.32■□□□□ 0.2
LIMK2-209ENST00000482270 PPP1R37O75864 691 aa16.28■□□□□ 0.2
LIMK2-209ENST00000482270 L3MBTL3Q96JM7 780 aaPredicted RBP16.27■□□□□ 0.2
LIMK2-209ENST00000482270 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.27■□□□□ 0.2
LIMK2-209ENST00000482270 BOLA1Q9Y3E2 137 aa16.27■□□□□ 0.2
LIMK2-209ENST00000482270 URB2Q14146 1524 aaKnown RBP16.25■□□□□ 0.19
LIMK2-209ENST00000482270 GTPBP6O43824 516 aaPredicted RBP16.24■□□□□ 0.19
LIMK2-209ENST00000482270 C3orf67Q6ZVT6 689 aa16.24■□□□□ 0.19
LIMK2-209ENST00000482270 CFAP44Q96MT7 982 aa16.24■□□□□ 0.19
LIMK2-209ENST00000482270 SCUBE2Q9NQ36 999 aa16.23■□□□□ 0.19
LIMK2-209ENST00000482270 PAXIP1Q6ZW49 1069 aaPredicted RBP16.22■□□□□ 0.19
LIMK2-209ENST00000482270 MICALL2Q8IY33 904 aa16.21■□□□□ 0.19
LIMK2-209ENST00000482270 OTUD5Q96G74 571 aa16.2■□□□□ 0.18
LIMK2-209ENST00000482270 RYDENQ9NUL5 291 aaKnown RBP16.19■□□□□ 0.18
LIMK2-209ENST00000482270 MAMSTRQ6ZN01 415 aa16.18■□□□□ 0.18
LIMK2-209ENST00000482270 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.16■□□□□ 0.18
LIMK2-209ENST00000482270 SPRYD3Q8NCJ5 442 aa16.15■□□□□ 0.18
LIMK2-209ENST00000482270 SLAIN1Q8ND83 568 aa16.12■□□□□ 0.17
LIMK2-209ENST00000482270 TOPBP1Q92547 1522 aa16.1■□□□□ 0.17
LIMK2-209ENST00000482270 TMEM121BQ9BXQ6 578 aaPredicted RBP16.09■□□□□ 0.17
LIMK2-209ENST00000482270 DNMBPQ6XZF7 1577 aa16.08■□□□□ 0.16
LIMK2-209ENST00000482270 SUPT5HO00267 1087 aaKnown RBP16.07■□□□□ 0.16
LIMK2-209ENST00000482270 ZNF608Q9ULD9 1512 aaPredicted RBP16.03■□□□□ 0.16
LIMK2-209ENST00000482270 TMEM92Q6UXU6 159 aa16.02■□□□□ 0.16
LIMK2-209ENST00000482270 IFT140Q96RY7 1462 aa16.02■□□□□ 0.15
LIMK2-209ENST00000482270 EIF4G3O43432 1585 aaKnown RBP16■□□□□ 0.15
LIMK2-209ENST00000482270 ABCC8Q09428 1581 aa16■□□□□ 0.15
LIMK2-209ENST00000482270 TARBP1Q13395 1621 aaKnown RBP15.97■□□□□ 0.15
LIMK2-209ENST00000482270 CADPS2Q86UW7 1296 aa15.94■□□□□ 0.14
LIMK2-209ENST00000482270 TMC2Q8TDI7 906 aa15.94■□□□□ 0.14
LIMK2-209ENST00000482270 POLA1P09884 1462 aaPredicted RBP15.94■□□□□ 0.14
LIMK2-209ENST00000482270 C2orf72A6NCS6 295 aa15.93■□□□□ 0.14
LIMK2-209ENST00000482270 PLCB2Q00722 1185 aa15.93■□□□□ 0.14
LIMK2-209ENST00000482270 CUX1P39880 1505 aa15.92■□□□□ 0.14
LIMK2-209ENST00000482270 RAD54L2Q9Y4B4 1467 aa15.91■□□□□ 0.14
LIMK2-209ENST00000482270 CHD1O14646 1710 aa15.91■□□□□ 0.14
LIMK2-209ENST00000482270 FGD5Q6ZNL6 1462 aa15.9■□□□□ 0.14
LIMK2-209ENST00000482270 AQRO60306 1485 aaKnown RBP eCLIP15.89■□□□□ 0.134e-8■■■■■ 31.9
LIMK2-209ENST00000482270 TSHZ2Q9NRE2 1034 aa15.87■□□□□ 0.13
LIMK2-209ENST00000482270 WDR97A6NE52 1622 aa15.85■□□□□ 0.13
LIMK2-209ENST00000482270 SOGA1O94964 1423 aa15.85■□□□□ 0.13
LIMK2-209ENST00000482270 HAP1P54257 671 aaPredicted RBP15.84■□□□□ 0.13
LIMK2-209ENST00000482270 NCKAP5LQ9HCH0 1330 aa15.84■□□□□ 0.13
LIMK2-209ENST00000482270 KIF3CO14782 793 aa15.82■□□□□ 0.12
LIMK2-209ENST00000482270 FAM163AQ96GL9 167 aaPredicted RBP15.81■□□□□ 0.12
LIMK2-209ENST00000482270 LARP6Q9BRS8 491 aaKnown RBP15.81■□□□□ 0.12
LIMK2-209ENST00000482270 TDRD9Q8NDG6 1382 aaKnown RBP15.8■□□□□ 0.12
LIMK2-209ENST00000482270 CRISPLD2Q9H0B8 497 aa15.8■□□□□ 0.12
LIMK2-209ENST00000482270 GPHNQ9NQX3 736 aaPredicted RBP15.8■□□□□ 0.12
LIMK2-209ENST00000482270 PBRM1Q86U86 1689 aa15.79■□□□□ 0.12
LIMK2-209ENST00000482270 RIMBP3CA6NJZ7 1639 aa15.79■□□□□ 0.12
LIMK2-209ENST00000482270 RIMBP3BA6NNM3 1639 aa15.79■□□□□ 0.12
LIMK2-209ENST00000482270 RIMBP3Q9UFD9 1639 aa15.79■□□□□ 0.12
LIMK2-209ENST00000482270 PDE4AP27815 886 aa15.78■□□□□ 0.12
LIMK2-209ENST00000482270 DSG2Q14126 1118 aa15.78■□□□□ 0.12
LIMK2-209ENST00000482270 PLPP6Q8IY26 295 aa15.75■□□□□ 0.11
LIMK2-209ENST00000482270 SNAPC4Q5SXM2 1469 aa15.75■□□□□ 0.11
LIMK2-209ENST00000482270 BIVM-ERCC5R4GMW8 1640 aa15.75■□□□□ 0.11
LIMK2-209ENST00000482270 SYNJ1O43426 1573 aa15.75■□□□□ 0.11
LIMK2-209ENST00000482270 PPP1R15BQ5SWA1 713 aa15.74■□□□□ 0.11
LIMK2-209ENST00000482270 SNPHO15079 494 aa15.73■□□□□ 0.11
LIMK2-209ENST00000482270 DDX27Q96GQ7 796 aaKnown RBP15.73■□□□□ 0.11
LIMK2-209ENST00000482270 HOXB3P14651 431 aaPredicted RBP15.72■□□□□ 0.11
LIMK2-209ENST00000482270 ZNF710Q8N1W2 664 aa15.72■□□□□ 0.11
LIMK2-209ENST00000482270 TOP2BQ02880 1626 aa15.72■□□□□ 0.11
LIMK2-209ENST00000482270 ABCA5Q8WWZ7 1642 aa15.72■□□□□ 0.11
LIMK2-209ENST00000482270 FOXK1P85037 733 aa15.71■□□□□ 0.11
LIMK2-209ENST00000482270 ARHGEF11O15085 1522 aa15.7■□□□□ 0.1
LIMK2-209ENST00000482270 DOK7Q18PE1 504 aa15.69■□□□□ 0.1
LIMK2-209ENST00000482270 GRIN2BQ13224 1484 aa15.69■□□□□ 0.1
LIMK2-209ENST00000482270 ABCA10Q8WWZ4 1543 aa15.68■□□□□ 0.1
LIMK2-209ENST00000482270 WRNQ14191 1432 aaPredicted RBP eCLIP15.68■□□□□ 0.1
LIMK2-209ENST00000482270 GAPVD1Q14C86 1478 aa15.67■□□□□ 0.1
LIMK2-209ENST00000482270 MAGI1Q96QZ7 1491 aaPredicted RBP15.67■□□□□ 0.1
LIMK2-209ENST00000482270 ST18O60284 1047 aa15.67■□□□□ 0.1
LIMK2-209ENST00000482270 UPF1Q92900 1129 aaKnown RBP eCLIP15.66■□□□□ 0.1
LIMK2-209ENST00000482270 RIMBP2O15034 1052 aa15.64■□□□□ 0.09
LIMK2-209ENST00000482270 MFSD10Q14728 455 aa15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms