RNA–Protein interactions for RNA: ENST00000481231.5

SMARCE1-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 3

Gene SMARCE1, Length 695 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-210ENST00000481231 CFAP74Q9C0B2 1584 aa16.15■□□□□ 0.18
SMARCE1-210ENST00000481231 PRXQ9BXM0 1461 aa16.15■□□□□ 0.18
SMARCE1-210ENST00000481231 UHRF1BP1Q6BDS2 1440 aa16.13■□□□□ 0.17
SMARCE1-210ENST00000481231 LTBP4Q8N2S1 1624 aa16.13■□□□□ 0.17
SMARCE1-210ENST00000481231 MAGI2Q86UL8 1455 aa16.13■□□□□ 0.17
SMARCE1-210ENST00000481231 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.13■□□□□ 0.17
SMARCE1-210ENST00000481231 SAMD9Q5K651 1589 aa16.11■□□□□ 0.17
SMARCE1-210ENST00000481231 PTPRTO14522 1441 aa16.11■□□□□ 0.17
SMARCE1-210ENST00000481231 C9orf84Q5VXU9 1444 aa16.09■□□□□ 0.17
SMARCE1-210ENST00000481231 SCAPERQ9BY12 1400 aa16.08■□□□□ 0.16
SMARCE1-210ENST00000481231 ATP10AO60312 1499 aa16.08■□□□□ 0.16
SMARCE1-210ENST00000481231 PLEKHD1A6NEE1 506 aa16.07■□□□□ 0.16
SMARCE1-210ENST00000481231 IQSEC2Q5JU85 1478 aa16.06■□□□□ 0.16
SMARCE1-210ENST00000481231 RANGAP1P46060 587 aaPredicted RBP16.02■□□□□ 0.16
SMARCE1-210ENST00000481231 NCOA1Q15788 1441 aa16.01■□□□□ 0.15
SMARCE1-210ENST00000481231 UBAP1LF5GYI3 381 aa16■□□□□ 0.15
SMARCE1-210ENST00000481231 PLCH2O75038 1416 aa15.99■□□□□ 0.15
SMARCE1-210ENST00000481231 C3P01024 1663 aa15.98■□□□□ 0.15
SMARCE1-210ENST00000481231 ZNF335Q9H4Z2 1342 aaPredicted RBP15.97■□□□□ 0.15
SMARCE1-210ENST00000481231 CDK13Q14004 1512 aaKnown RBP15.97■□□□□ 0.15
SMARCE1-210ENST00000481231 MED1Q15648 1581 aaPredicted RBP15.96■□□□□ 0.14
SMARCE1-210ENST00000481231 CSRNP3Q8WYN3 585 aa15.94■□□□□ 0.14
SMARCE1-210ENST00000481231 DIP2CQ9Y2E4 1556 aa15.94■□□□□ 0.14
SMARCE1-210ENST00000481231 TRAPPC8Q9Y2L5 1435 aa15.94■□□□□ 0.14
SMARCE1-210ENST00000481231 ZNF518AQ6AHZ1 1483 aa15.93■□□□□ 0.14
SMARCE1-210ENST00000481231 CAMSAP1Q5T5Y3 1602 aa15.93■□□□□ 0.14
SMARCE1-210ENST00000481231 SETD1BQ9UPS6 1966 aaKnown RBP15.93■□□□□ 0.14
SMARCE1-210ENST00000481231 AFAP1Q8N556 730 aa15.92■□□□□ 0.14
SMARCE1-210ENST00000481231 MYT1LQ9UL68 1186 aa15.92■□□□□ 0.14
SMARCE1-210ENST00000481231 KDM5CP41229 1560 aa15.92■□□□□ 0.14
SMARCE1-210ENST00000481231 NCKAP5LQ9HCH0 1330 aa15.91■□□□□ 0.14
SMARCE1-210ENST00000481231 EFCAB2Q5VUJ9 269 aa15.9■□□□□ 0.14
SMARCE1-210ENST00000481231 ABCA6Q8N139 1617 aa15.9■□□□□ 0.14
SMARCE1-210ENST00000481231 HSPA1LP34931 641 aa15.89■□□□□ 0.13
SMARCE1-210ENST00000481231 ESF1Q9H501 851 aaKnown RBP15.89■□□□□ 0.13
SMARCE1-210ENST00000481231 REREQ9P2R6 1566 aa15.88■□□□□ 0.13
SMARCE1-210ENST00000481231 SCAF1Q9H7N4 1312 aaKnown RBP15.88■□□□□ 0.13
SMARCE1-210ENST00000481231 MYO5CQ9NQX4 1742 aa15.88■□□□□ 0.13
SMARCE1-210ENST00000481231 ARHGAP5Q13017 1502 aa15.85■□□□□ 0.13
SMARCE1-210ENST00000481231 PIP4K2BP78356 416 aa15.85■□□□□ 0.13
SMARCE1-210ENST00000481231 KIF14Q15058 1648 aa15.85■□□□□ 0.13
SMARCE1-210ENST00000481231 AGLP35573 1532 aa15.84■□□□□ 0.13
SMARCE1-210ENST00000481231 EEA1Q15075 1411 aa15.84■□□□□ 0.13
SMARCE1-210ENST00000481231 CNTLNQ9NXG0 1405 aa15.82■□□□□ 0.12
SMARCE1-210ENST00000481231 MLH3Q9UHC1 1453 aa15.82■□□□□ 0.12
SMARCE1-210ENST00000481231 NPATQ14207 1427 aa15.81■□□□□ 0.12
SMARCE1-210ENST00000481231 PHF23Q9BUL5 403 aaPredicted RBP15.81■□□□□ 0.12
SMARCE1-210ENST00000481231 ATP1B4Q9UN42 357 aaPredicted RBP15.8■□□□□ 0.12
SMARCE1-210ENST00000481231 TCOF1Q13428 1488 aaKnown RBP15.79■□□□□ 0.12
SMARCE1-210ENST00000481231 PLA2R1Q13018 1463 aa15.78■□□□□ 0.12
SMARCE1-210ENST00000481231 MYO3AQ8NEV4 1616 aa15.78■□□□□ 0.12
SMARCE1-210ENST00000481231 PKD2Q13563 968 aa15.77■□□□□ 0.12
SMARCE1-210ENST00000481231 PPP6R1Q9UPN7 881 aa15.77■□□□□ 0.12
SMARCE1-210ENST00000481231 ZMYM3Q14202 1370 aa15.76■□□□□ 0.11
SMARCE1-210ENST00000481231 ZNF142P52746 1687 aaPredicted RBP15.76■□□□□ 0.11
SMARCE1-210ENST00000481231 CEP170BQ9Y4F5 1589 aaPredicted RBP15.75■□□□□ 0.11
SMARCE1-210ENST00000481231 ABCC1P33527 1531 aa15.75■□□□□ 0.11
SMARCE1-210ENST00000481231 MROH2AA6NES4 1674 aa15.75■□□□□ 0.11
SMARCE1-210ENST00000481231 TROQ12816 1431 aaPredicted RBP15.74■□□□□ 0.11
SMARCE1-210ENST00000481231 KIDINS220Q9ULH0 1771 aa15.74■□□□□ 0.11
SMARCE1-210ENST00000481231 TOM1O60784 492 aa15.73■□□□□ 0.11
SMARCE1-210ENST00000481231 SENP3Q9H4L4 574 aaPredicted RBP15.72■□□□□ 0.11
SMARCE1-210ENST00000481231 ITSN2Q9NZM3 1697 aa15.72■□□□□ 0.11
SMARCE1-210ENST00000481231 CDC42BPBQ9Y5S2 1711 aa15.71■□□□□ 0.11
SMARCE1-210ENST00000481231 CDK11AQ9UQ88 783 aaPredicted RBP15.71■□□□□ 0.11
SMARCE1-210ENST00000481231 SUPT6HQ7KZ85 1726 aaKnown RBP15.71■□□□□ 0.1
SMARCE1-210ENST00000481231 CLIP1P30622 1438 aa15.7■□□□□ 0.1
SMARCE1-210ENST00000481231 PTPRKQ15262 1439 aa15.7■□□□□ 0.1
SMARCE1-210ENST00000481231 CLTCQ00610 1675 aaKnown RBP15.7■□□□□ 0.1
SMARCE1-210ENST00000481231 CPS1P31327 1500 aa15.68■□□□□ 0.1
SMARCE1-210ENST00000481231 PREX2Q70Z35 1606 aa15.68■□□□□ 0.1
SMARCE1-210ENST00000481231 ALKQ9UM73 1620 aa15.68■□□□□ 0.1
SMARCE1-210ENST00000481231 FMN1Q68DA7 1419 aa15.67■□□□□ 0.1
SMARCE1-210ENST00000481231 SAMD9LQ8IVG5 1584 aa15.66■□□□□ 0.1
SMARCE1-210ENST00000481231 SHANK2Q9UPX8 1470 aa15.66■□□□□ 0.1
SMARCE1-210ENST00000481231 NEURL4Q96JN8 1562 aa15.66■□□□□ 0.1
SMARCE1-210ENST00000481231 EHMT2Q96KQ7 1210 aa15.64■□□□□ 0.09
SMARCE1-210ENST00000481231 RGS17Q9UGC6 210 aaPredicted RBP15.64■□□□□ 0.09
SMARCE1-210ENST00000481231 DNMT1P26358 1616 aaKnown RBP15.64■□□□□ 0.09
SMARCE1-210ENST00000481231 A2ML1A8K2U0 1454 aa15.63■□□□□ 0.09
SMARCE1-210ENST00000481231 LRRIQ1Q96JM4 1722 aa15.63■□□□□ 0.09
SMARCE1-210ENST00000481231 UBTFP17480 764 aaKnown RBP15.62■□□□□ 0.09
SMARCE1-210ENST00000481231 PLXNC1O60486 1568 aa15.62■□□□□ 0.09
SMARCE1-210ENST00000481231 ARHGAP35Q9NRY4 1499 aa15.61■□□□□ 0.09
SMARCE1-210ENST00000481231 GGT6Q6P531 493 aa15.61■□□□□ 0.09
SMARCE1-210ENST00000481231 SYCP2Q9BX26 1530 aa15.61■□□□□ 0.09
SMARCE1-210ENST00000481231 VWDEQ8N2E2 1590 aa15.61■□□□□ 0.09
SMARCE1-210ENST00000481231 POLR1AO95602 1720 aaPredicted RBP15.6■□□□□ 0.09
SMARCE1-210ENST00000481231 ZNF777Q9ULD5 760 aaPredicted RBP15.6■□□□□ 0.09
SMARCE1-210ENST00000481231 SPAG9O60271 1321 aaKnown RBP15.6■□□□□ 0.09
SMARCE1-210ENST00000481231 ATP7AQ04656 1500 aa15.58■□□□□ 0.09
SMARCE1-210ENST00000481231 A2MP01023 1474 aa15.58■□□□□ 0.08
SMARCE1-210ENST00000481231 CHIC1Q5VXU3 224 aa15.57■□□□□ 0.08
SMARCE1-210ENST00000481231 CDC42BPAQ5VT25 1732 aa15.57■□□□□ 0.08
SMARCE1-210ENST00000481231 HNRNPMP52272 730 aaKnown RBP eCLIP15.56■□□□□ 0.08
SMARCE1-210ENST00000481231 INO80Q9ULG1 1556 aaPredicted RBP15.55■□□□□ 0.08
SMARCE1-210ENST00000481231 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.55■□□□□ 0.08
SMARCE1-210ENST00000481231 FBXO31Q5XUX0 539 aaPredicted RBP15.54■□□□□ 0.08
SMARCE1-210ENST00000481231 TNRQ92752 1358 aa15.53■□□□□ 0.08
SMARCE1-210ENST00000481231 POTEAQ6S8J7 498 aa15.52■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms