RNA–Protein interactions for RNA: ENST00000481062.1

DKC1-210, Transcript of dyskerin pseudouridine synthase 1, humanhuman

TSL 2

Gene DKC1, Length 819 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DKC1-210ENST00000481062 HECW1Q76N89 1606 aa22.2■■□□□ 1.14
DKC1-210ENST00000481062 SIGLEC1Q9BZZ2 1709 aa22.2■■□□□ 1.14
DKC1-210ENST00000481062 PREX1Q8TCU6 1659 aa22.18■■□□□ 1.14
DKC1-210ENST00000481062 ATP10AO60312 1499 aa22.18■■□□□ 1.14
DKC1-210ENST00000481062 SCAPERQ9BY12 1400 aa22.18■■□□□ 1.14
DKC1-210ENST00000481062 ARHGEF12Q9NZN5 1544 aa22.17■■□□□ 1.14
DKC1-210ENST00000481062 RANGAP1P46060 587 aaPredicted RBP22.16■■□□□ 1.14
DKC1-210ENST00000481062 PLCH2O75038 1416 aa22.15■■□□□ 1.14
DKC1-210ENST00000481062 C9orf84Q5VXU9 1444 aa22.15■■□□□ 1.14
DKC1-210ENST00000481062 CEBPAP49715 358 aaPredicted RBP22.13■■□□□ 1.13
DKC1-210ENST00000481062 UHRF1BP1Q6BDS2 1440 aa22.13■■□□□ 1.13
DKC1-210ENST00000481062 EFCAB2Q5VUJ9 269 aa22.11■■□□□ 1.13
DKC1-210ENST00000481062 STRCQ7RTU9 1775 aa22.07■■□□□ 1.12
DKC1-210ENST00000481062 PTPRTO14522 1441 aa22.07■■□□□ 1.12
DKC1-210ENST00000481062 SPATA31D1Q6ZQQ2 1576 aa22.06■■□□□ 1.12
DKC1-210ENST00000481062 SETD1BQ9UPS6 1966 aaKnown RBP22.05■■□□□ 1.12
DKC1-210ENST00000481062 EEA1Q15075 1411 aa22.04■■□□□ 1.12
DKC1-210ENST00000481062 ZNF518AQ6AHZ1 1483 aa22.03■■□□□ 1.12
DKC1-210ENST00000481062 CDK11AQ9UQ88 783 aaPredicted RBP22.02■■□□□ 1.12
DKC1-210ENST00000481062 CDK13Q14004 1512 aaKnown RBP22.01■■□□□ 1.11
DKC1-210ENST00000481062 IQSEC2Q5JU85 1478 aa22.01■■□□□ 1.11
DKC1-210ENST00000481062 ESF1Q9H501 851 aaKnown RBP22■■□□□ 1.11
DKC1-210ENST00000481062 MYT1LQ9UL68 1186 aa22■■□□□ 1.11
DKC1-210ENST00000481062 MYO5CQ9NQX4 1742 aa21.97■■□□□ 1.11
DKC1-210ENST00000481062 AFAP1Q8N556 730 aa21.97■■□□□ 1.11
DKC1-210ENST00000481062 TRAPPC8Q9Y2L5 1435 aa21.95■■□□□ 1.1
DKC1-210ENST00000481062 KDM5CP41229 1560 aa21.95■■□□□ 1.1
DKC1-210ENST00000481062 REREQ9P2R6 1566 aa21.95■■□□□ 1.1
DKC1-210ENST00000481062 ATP1B4Q9UN42 357 aaPredicted RBP21.94■■□□□ 1.1
DKC1-210ENST00000481062 LTBP4Q8N2S1 1624 aa21.94■■□□□ 1.1
DKC1-210ENST00000481062 ARHGAP5Q13017 1502 aa21.91■■□□□ 1.1
DKC1-210ENST00000481062 FMN1Q68DA7 1419 aa21.91■■□□□ 1.1
DKC1-210ENST00000481062 C3P01024 1663 aa21.9■■□□□ 1.1
DKC1-210ENST00000481062 DIP2CQ9Y2E4 1556 aa21.9■■□□□ 1.1
DKC1-210ENST00000481062 MLH3Q9UHC1 1453 aa21.9■■□□□ 1.1
DKC1-210ENST00000481062 KIF14Q15058 1648 aa21.89■■□□□ 1.09
DKC1-210ENST00000481062 AGLP35573 1532 aa21.89■■□□□ 1.09
DKC1-210ENST00000481062 NCOA1Q15788 1441 aa21.89■■□□□ 1.09
DKC1-210ENST00000481062 CNTLNQ9NXG0 1405 aa21.89■■□□□ 1.09
DKC1-210ENST00000481062 CLIP1P30622 1438 aa21.88■■□□□ 1.09
DKC1-210ENST00000481062 TROQ12816 1431 aaPredicted RBP21.87■■□□□ 1.09
DKC1-210ENST00000481062 ABCA6Q8N139 1617 aa21.82■■□□□ 1.08
DKC1-210ENST00000481062 NPATQ14207 1427 aa21.81■■□□□ 1.08
DKC1-210ENST00000481062 UBAP1LF5GYI3 381 aa21.81■■□□□ 1.08
DKC1-210ENST00000481062 CAMSAP1Q5T5Y3 1602 aa21.79■■□□□ 1.08
DKC1-210ENST00000481062 PKD2Q13563 968 aa21.77■■□□□ 1.08
DKC1-210ENST00000481062 UBTFP17480 764 aaKnown RBP21.76■■□□□ 1.07
DKC1-210ENST00000481062 ZNF335Q9H4Z2 1342 aaPredicted RBP21.75■■□□□ 1.07
DKC1-210ENST00000481062 ABCC1P33527 1531 aa21.75■■□□□ 1.07
DKC1-210ENST00000481062 CDC42BPBQ9Y5S2 1711 aa21.75■■□□□ 1.07
DKC1-210ENST00000481062 ZMYM3Q14202 1370 aa21.74■■□□□ 1.07
DKC1-210ENST00000481062 NCKAP5LQ9HCH0 1330 aa21.74■■□□□ 1.07
DKC1-210ENST00000481062 ARHGAP35Q9NRY4 1499 aa21.73■■□□□ 1.07
DKC1-210ENST00000481062 MROH2AA6NES4 1674 aa21.72■■□□□ 1.07
DKC1-210ENST00000481062 PLA2R1Q13018 1463 aa21.71■■□□□ 1.07
DKC1-210ENST00000481062 PREX2Q70Z35 1606 aa21.7■■□□□ 1.06
DKC1-210ENST00000481062 KIDINS220Q9ULH0 1771 aa21.7■■□□□ 1.06
DKC1-210ENST00000481062 ITSN2Q9NZM3 1697 aa21.69■■□□□ 1.06
DKC1-210ENST00000481062 TCOF1Q13428 1488 aaKnown RBP21.64■■□□□ 1.06
DKC1-210ENST00000481062 SPAG9O60271 1321 aaKnown RBP21.64■■□□□ 1.05
DKC1-210ENST00000481062 PPP6R1Q9UPN7 881 aa21.64■■□□□ 1.05
DKC1-210ENST00000481062 CCDC18Q5T9S5 1454 aa21.64■■□□□ 1.05
DKC1-210ENST00000481062 ZNF142P52746 1687 aaPredicted RBP21.63■■□□□ 1.05
DKC1-210ENST00000481062 SAMD9LQ8IVG5 1584 aa21.62■■□□□ 1.05
DKC1-210ENST00000481062 EHMT2Q96KQ7 1210 aa21.62■■□□□ 1.05
DKC1-210ENST00000481062 TOM1O60784 492 aa21.61■■□□□ 1.05
DKC1-210ENST00000481062 CEP170BQ9Y4F5 1589 aaPredicted RBP21.61■■□□□ 1.05
DKC1-210ENST00000481062 LRRIQ1Q96JM4 1722 aa21.6■■□□□ 1.05
DKC1-210ENST00000481062 MYO3AQ8NEV4 1616 aa21.6■■□□□ 1.05
DKC1-210ENST00000481062 ZNF777Q9ULD5 760 aaPredicted RBP21.6■■□□□ 1.05
DKC1-210ENST00000481062 PTPRKQ15262 1439 aa21.6■■□□□ 1.05
DKC1-210ENST00000481062 SCAF1Q9H7N4 1312 aaKnown RBP21.58■■□□□ 1.05
DKC1-210ENST00000481062 HSPA1LP34931 641 aa21.58■■□□□ 1.05
DKC1-210ENST00000481062 SUPT6HQ7KZ85 1726 aaKnown RBP21.58■■□□□ 1.04
DKC1-210ENST00000481062 CASKIN1Q8WXD9 1431 aa21.57■■□□□ 1.04
DKC1-210ENST00000481062 CDC42BPAQ5VT25 1732 aa21.57■■□□□ 1.04
DKC1-210ENST00000481062 CLTCQ00610 1675 aaKnown RBP21.56■■□□□ 1.04
DKC1-210ENST00000481062 HNRNPMP52272 730 aaKnown RBP eCLIP21.56■■□□□ 1.04
DKC1-210ENST00000481062 GGT6Q6P531 493 aa21.56■■□□□ 1.04
DKC1-210ENST00000481062 MED1Q15648 1581 aaPredicted RBP21.56■■□□□ 1.04
DKC1-210ENST00000481062 PIP4K2BP78356 416 aa21.55■■□□□ 1.04
DKC1-210ENST00000481062 A2MP01023 1474 aa21.55■■□□□ 1.04
DKC1-210ENST00000481062 ATP7AQ04656 1500 aa21.54■■□□□ 1.04
DKC1-210ENST00000481062 SYCP2Q9BX26 1530 aa21.54■■□□□ 1.04
DKC1-210ENST00000481062 KIAA1107Q9UPP5 1409 aa21.54■■□□□ 1.04
DKC1-210ENST00000481062 CPS1P31327 1500 aa21.53■■□□□ 1.04
DKC1-210ENST00000481062 PLXNC1O60486 1568 aa21.53■■□□□ 1.04
DKC1-210ENST00000481062 A2ML1A8K2U0 1454 aa21.52■■□□□ 1.04
DKC1-210ENST00000481062 PLEKHH2Q8IVE3 1493 aa21.52■■□□□ 1.04
DKC1-210ENST00000481062 PHF23Q9BUL5 403 aaPredicted RBP21.51■■□□□ 1.03
DKC1-210ENST00000481062 GPATCH8Q9UKJ3 1502 aaKnown RBP21.5■■□□□ 1.03
DKC1-210ENST00000481062 CFDP1Q9UEE9 299 aaPredicted RBP21.49■■□□□ 1.03
DKC1-210ENST00000481062 INO80Q9ULG1 1556 aaPredicted RBP21.48■■□□□ 1.03
DKC1-210ENST00000481062 SHANK2Q9UPX8 1470 aa21.47■■□□□ 1.03
DKC1-210ENST00000481062 DNMT1P26358 1616 aaKnown RBP21.47■■□□□ 1.03
DKC1-210ENST00000481062 ANKLE2Q86XL3 938 aa21.44■■□□□ 1.02
DKC1-210ENST00000481062 FYCO1Q9BQS8 1478 aa21.44■■□□□ 1.02
DKC1-210ENST00000481062 CCNB3Q8WWL7 1395 aa21.42■■□□□ 1.02
DKC1-210ENST00000481062 ADGBQ8N7X0 1667 aa21.41■■□□□ 1.02
DKC1-210ENST00000481062 TNRQ92752 1358 aa21.41■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 6.9 ms