RNA–Protein interactions for RNA: ENST00000480468.1

SIK3-210, Transcript of SIK family kinase 3, humanhuman

TSL 1 (best)

Gene SIK3, Length 2,237 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-210ENST00000480468 FHOD3Q2V2M9 1422 aa14.21□□□□□ -0.14
SIK3-210ENST00000480468 NPM2Q86SE8 214 aaKnown RBP14.21□□□□□ -0.14
SIK3-210ENST00000480468 DHX29Q7Z478 1369 aaKnown RBP14.2□□□□□ -0.14
SIK3-210ENST00000480468 PRDM2Q13029 1718 aa14.19□□□□□ -0.14
SIK3-210ENST00000480468 MIA2Q96PC5 1412 aa14.18□□□□□ -0.14
SIK3-210ENST00000480468 SNAPC4Q5SXM2 1469 aa14.18□□□□□ -0.14
SIK3-210ENST00000480468 MTUS2Q5JR59 1369 aa14.17□□□□□ -0.14
SIK3-210ENST00000480468 L3MBTL2Q969R5 705 aa14.17□□□□□ -0.14
SIK3-210ENST00000480468 RRP1P56182 461 aaKnown RBP14.17□□□□□ -0.14
SIK3-210ENST00000480468 FAM43AQ8N2R8 423 aa14.17□□□□□ -0.14
SIK3-210ENST00000480468 THOC2Q8NI27 1593 aaKnown RBP14.15□□□□□ -0.14
SIK3-210ENST00000480468 RPRD2Q5VT52 1461 aaKnown RBP14.15□□□□□ -0.14
SIK3-210ENST00000480468 TEX14Q8IWB6 1497 aa14.15□□□□□ -0.14
SIK3-210ENST00000480468 SUPT6HQ7KZ85 1726 aaKnown RBP14.15□□□□□ -0.14
SIK3-210ENST00000480468 NFKBIBQ15653 356 aa14.15□□□□□ -0.14
SIK3-210ENST00000480468 ATP1B4Q9UN42 357 aaPredicted RBP14.15□□□□□ -0.14
SIK3-210ENST00000480468 TCOF1Q13428 1488 aaKnown RBP14.15□□□□□ -0.14
SIK3-210ENST00000480468 PNISRQ8TF01 805 aaKnown RBP14.14□□□□□ -0.15
SIK3-210ENST00000480468 ARID4BQ4LE39 1312 aaPredicted RBP14.14□□□□□ -0.15
SIK3-210ENST00000480468 EIF5BO60841 1220 aaKnown RBP14.14□□□□□ -0.15
SIK3-210ENST00000480468 LRPPRCP42704 1394 aaKnown RBP14.13□□□□□ -0.15
SIK3-210ENST00000480468 EHBP1L1Q8N3D4 1523 aa14.13□□□□□ -0.15
SIK3-210ENST00000480468 ARHGEF11O15085 1522 aa14.13□□□□□ -0.15
SIK3-210ENST00000480468 FRAT1Q92837 279 aaPredicted RBP14.12□□□□□ -0.15
SIK3-210ENST00000480468 UGGT2Q9NYU1 1516 aa14.11□□□□□ -0.15
SIK3-210ENST00000480468 P3H3Q8IVL6 736 aa14.11□□□□□ -0.15
SIK3-210ENST00000480468 EXOC6Q8TAG9 804 aa14.11□□□□□ -0.15
SIK3-210ENST00000480468 NBPF8Q3BBV2 869 aa14.1□□□□□ -0.15
SIK3-210ENST00000480468 MPHOSPH9Q99550 1183 aa14.1□□□□□ -0.15
SIK3-210ENST00000480468 CTTNBP2Q8WZ74 1663 aa14.1□□□□□ -0.15
SIK3-210ENST00000480468 ANKRD30BQ9BXX2 1392 aa14.1□□□□□ -0.15
SIK3-210ENST00000480468 KTN1Q86UP2 1357 aaKnown RBP14.09□□□□□ -0.15
SIK3-210ENST00000480468 ROCK2O75116 1388 aaKnown RBP14.08□□□□□ -0.16
SIK3-210ENST00000480468 PDE3BQ13370 1112 aa14.08□□□□□ -0.16
SIK3-210ENST00000480468 RCAN3Q9UKA8 241 aa14.08□□□□□ -0.16
SIK3-210ENST00000480468 KDM6BO15054 1643 aa14.07□□□□□ -0.16
SIK3-210ENST00000480468 GRIN2BQ13224 1484 aa14.07□□□□□ -0.16
SIK3-210ENST00000480468 LRRIQ1Q96JM4 1722 aa14.07□□□□□ -0.16
SIK3-210ENST00000480468 BRD4O60885 1362 aaPredicted RBP14.07□□□□□ -0.16
SIK3-210ENST00000480468 CC2D2AQ9P2K1 1620 aa14.06□□□□□ -0.16
SIK3-210ENST00000480468 PKNOX2Q96KN3 472 aa14.06□□□□□ -0.16
SIK3-210ENST00000480468 TMC1Q8TDI8 760 aa14.05□□□□□ -0.16
SIK3-210ENST00000480468 CUL7Q14999 1698 aa14.05□□□□□ -0.16
SIK3-210ENST00000480468 SAMD9Q5K651 1589 aa14.05□□□□□ -0.16
SIK3-210ENST00000480468 RRP7BPQ9NSQ0 103 aa14.05□□□□□ -0.16
SIK3-210ENST00000480468 GLIPR1L2Q4G1C9 344 aa14.04□□□□□ -0.16
SIK3-210ENST00000480468 BCORL1Q5H9F3 1711 aa14.04□□□□□ -0.16
SIK3-210ENST00000480468 MBD5Q9P267 1494 aa14.03□□□□□ -0.16
SIK3-210ENST00000480468 DAXXQ9UER7 740 aaPredicted RBP14.03□□□□□ -0.16
SIK3-210ENST00000480468 KIF15Q9NS87 1388 aa14.02□□□□□ -0.17
SIK3-210ENST00000480468 KIF21AQ7Z4S6 1674 aa14□□□□□ -0.17
SIK3-210ENST00000480468 INSRP06213 1382 aa14□□□□□ -0.17
SIK3-210ENST00000480468 ROCK1Q13464 1354 aa14□□□□□ -0.17
SIK3-210ENST00000480468 USP47Q96K76 1375 aa14□□□□□ -0.17
SIK3-210ENST00000480468 KDM5CP41229 1560 aa14□□□□□ -0.17
SIK3-210ENST00000480468 MYBBP1AQ9BQG0 1328 aaKnown RBP13.99□□□□□ -0.17
SIK3-210ENST00000480468 RALBP1Q15311 655 aa13.99□□□□□ -0.17
SIK3-210ENST00000480468 KIF14Q15058 1648 aa13.99□□□□□ -0.17
SIK3-210ENST00000480468 ZMYM4Q5VZL5 1548 aa13.98□□□□□ -0.17
SIK3-210ENST00000480468 ABCA10Q8WWZ4 1543 aa13.98□□□□□ -0.17
SIK3-210ENST00000480468 DCAF11Q8TEB1 546 aa13.98□□□□□ -0.17
SIK3-210ENST00000480468 CHIC2Q9UKJ5 165 aa13.96□□□□□ -0.17
SIK3-210ENST00000480468 KDM2BQ8NHM5 1336 aa13.96□□□□□ -0.18
SIK3-210ENST00000480468 MAGI3Q5TCQ9 1506 aa13.96□□□□□ -0.18
SIK3-210ENST00000480468 FRAT2O75474 233 aaPredicted RBP13.95□□□□□ -0.18
SIK3-210ENST00000480468 FAM161AQ3B820 660 aa13.95□□□□□ -0.18
SIK3-210ENST00000480468 FOXD1Q16676 465 aa13.94□□□□□ -0.18
SIK3-210ENST00000480468 E9PCH4 1651 aa13.93□□□□□ -0.18
SIK3-210ENST00000480468 SLC4A3P48751 1232 aa13.93□□□□□ -0.18
SIK3-210ENST00000480468 L1TD1Q5T7N2 865 aaKnown RBP13.93□□□□□ -0.18
SIK3-210ENST00000480468 CENPQQ7L2Z9 268 aaPredicted RBP13.93□□□□□ -0.18
SIK3-210ENST00000480468 PLEKHH2Q8IVE3 1493 aa13.92□□□□□ -0.18
SIK3-210ENST00000480468 CADPSQ9ULU8 1353 aa13.92□□□□□ -0.18
SIK3-210ENST00000480468 UHRF1BP1Q6BDS2 1440 aa13.92□□□□□ -0.18
SIK3-210ENST00000480468 C8orf34Q49A92 452 aa13.92□□□□□ -0.18
SIK3-210ENST00000480468 RALGAPBQ86X10 1494 aa13.91□□□□□ -0.18
SIK3-210ENST00000480468 CRBNQ96SW2 442 aa13.91□□□□□ -0.18
SIK3-210ENST00000480468 NLRP13Q86W25 1043 aa13.9□□□□□ -0.18
SIK3-210ENST00000480468 RRAGDQ9NQL2 400 aaPredicted RBP13.89□□□□□ -0.19
SIK3-210ENST00000480468 PARD3Q8TEW0 1356 aa13.88□□□□□ -0.19
SIK3-210ENST00000480468 BLMP54132 1417 aaPredicted RBP13.88□□□□□ -0.19
SIK3-210ENST00000480468 DNMT1P26358 1616 aaKnown RBP13.88□□□□□ -0.19
SIK3-210ENST00000480468 DAPK1P53355 1430 aa13.88□□□□□ -0.19
SIK3-210ENST00000480468 RRP9O43818 475 aaKnown RBP13.88□□□□□ -0.19
SIK3-210ENST00000480468 SLC4A1APQ9BWU0 796 aaKnown RBP13.88□□□□□ -0.19
SIK3-210ENST00000480468 DNMBPQ6XZF7 1577 aa13.87□□□□□ -0.19
SIK3-210ENST00000480468 PZPP20742 1482 aa13.87□□□□□ -0.19
SIK3-210ENST00000480468 SENP3-EIF4A1A0A087X0R7 540 aa13.87□□□□□ -0.19
SIK3-210ENST00000480468 CNGB1Q14028 1251 aaPredicted RBP13.86□□□□□ -0.19
SIK3-210ENST00000480468 POLR3GLQ9BT43 218 aa13.86□□□□□ -0.19
SIK3-210ENST00000480468 GAPVD1Q14C86 1478 aa13.86□□□□□ -0.19
SIK3-210ENST00000480468 ARHGEF12Q9NZN5 1544 aa13.85□□□□□ -0.19
SIK3-210ENST00000480468 SKAP1Q86WV1 359 aa13.85□□□□□ -0.19
SIK3-210ENST00000480468 ZMYND15Q9H091 742 aa13.85□□□□□ -0.19
SIK3-210ENST00000480468 KIAA1107Q9UPP5 1409 aa13.85□□□□□ -0.19
SIK3-210ENST00000480468 VIRMAQ69YN4 1812 aaKnown RBP13.85□□□□□ -0.19
SIK3-210ENST00000480468 PLIN1O60240 522 aa13.84□□□□□ -0.19
SIK3-210ENST00000480468 CDCA7LQ96GN5 454 aa13.84□□□□□ -0.19
SIK3-210ENST00000480468 ABCC5O15440 1437 aa13.84□□□□□ -0.19
SIK3-210ENST00000480468 NESP48681 1621 aa13.83□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms