RNA–Protein interactions for RNA: ENST00000480438.1

HUWE1-211, Transcript of HECT, UBA and WWE domain containing 1, E3 ubiquitin protein ligase, humanhuman

TSL 2

Gene HUWE1, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HUWE1-211ENST00000480438 ARHGEF12Q9NZN5 1544 aa24.12■■□□□ 1.45
HUWE1-211ENST00000480438 LTBP4Q8N2S1 1624 aa24.1■■□□□ 1.45
HUWE1-211ENST00000480438 RAPGEF6Q8TEU7 1601 aa24.1■■□□□ 1.45
HUWE1-211ENST00000480438 HECW1Q76N89 1606 aa24.09■■□□□ 1.45
HUWE1-211ENST00000480438 ATP10AO60312 1499 aa24.07■■□□□ 1.44
HUWE1-211ENST00000480438 NUP153P49790 1475 aaKnown RBP24.07■■□□□ 1.44
HUWE1-211ENST00000480438 PRXQ9BXM0 1461 aa24.07■■□□□ 1.44
HUWE1-211ENST00000480438 SCAPERQ9BY12 1400 aa24.06■■□□□ 1.44
HUWE1-211ENST00000480438 CFAP74Q9C0B2 1584 aa24.06■■□□□ 1.44
HUWE1-211ENST00000480438 IQSEC2Q5JU85 1478 aa24.06■■□□□ 1.44
HUWE1-211ENST00000480438 UBAP1LF5GYI3 381 aa24.04■■□□□ 1.44
HUWE1-211ENST00000480438 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.04■■□□□ 1.44
HUWE1-211ENST00000480438 C9orf84Q5VXU9 1444 aa24.03■■□□□ 1.44
HUWE1-211ENST00000480438 SETD1BQ9UPS6 1966 aaKnown RBP24■■□□□ 1.43
HUWE1-211ENST00000480438 RANGAP1P46060 587 aaPredicted RBP23.97■■□□□ 1.43
HUWE1-211ENST00000480438 SAMD9Q5K651 1589 aa23.95■■□□□ 1.43
HUWE1-211ENST00000480438 ZNF335Q9H4Z2 1342 aaPredicted RBP23.92■■□□□ 1.42
HUWE1-211ENST00000480438 PLCH2O75038 1416 aa23.92■■□□□ 1.42
HUWE1-211ENST00000480438 NCOA1Q15788 1441 aa23.92■■□□□ 1.42
HUWE1-211ENST00000480438 MYT1LQ9UL68 1186 aa23.9■■□□□ 1.42
HUWE1-211ENST00000480438 TRAPPC8Q9Y2L5 1435 aa23.9■■□□□ 1.42
HUWE1-211ENST00000480438 EFCAB2Q5VUJ9 269 aa23.89■■□□□ 1.41
HUWE1-211ENST00000480438 ESF1Q9H501 851 aaKnown RBP23.89■■□□□ 1.41
HUWE1-211ENST00000480438 AFAP1Q8N556 730 aa23.88■■□□□ 1.41
HUWE1-211ENST00000480438 NCKAP5LQ9HCH0 1330 aa23.86■■□□□ 1.41
HUWE1-211ENST00000480438 HSPA1LP34931 641 aa23.85■■□□□ 1.41
HUWE1-211ENST00000480438 C3P01024 1663 aa23.82■■□□□ 1.4
HUWE1-211ENST00000480438 SCAF1Q9H7N4 1312 aaKnown RBP23.82■■□□□ 1.4
HUWE1-211ENST00000480438 MED1Q15648 1581 aaPredicted RBP23.81■■□□□ 1.4
HUWE1-211ENST00000480438 CAMSAP1Q5T5Y3 1602 aa23.78■■□□□ 1.4
HUWE1-211ENST00000480438 PIP4K2BP78356 416 aa23.78■■□□□ 1.4
HUWE1-211ENST00000480438 ZNF518AQ6AHZ1 1483 aa23.78■■□□□ 1.4
HUWE1-211ENST00000480438 PHF23Q9BUL5 403 aaPredicted RBP23.76■■□□□ 1.39
HUWE1-211ENST00000480438 CDK13Q14004 1512 aaKnown RBP23.75■■□□□ 1.39
HUWE1-211ENST00000480438 CSRNP3Q8WYN3 585 aa23.74■■□□□ 1.39
HUWE1-211ENST00000480438 DIP2CQ9Y2E4 1556 aa23.72■■□□□ 1.39
HUWE1-211ENST00000480438 PKD2Q13563 968 aa23.71■■□□□ 1.39
HUWE1-211ENST00000480438 KDM5CP41229 1560 aa23.7■■□□□ 1.38
HUWE1-211ENST00000480438 CNTLNQ9NXG0 1405 aa23.69■■□□□ 1.38
HUWE1-211ENST00000480438 REREQ9P2R6 1566 aa23.69■■□□□ 1.38
HUWE1-211ENST00000480438 TOM1O60784 492 aa23.68■■□□□ 1.38
HUWE1-211ENST00000480438 ATP1B4Q9UN42 357 aaPredicted RBP23.68■■□□□ 1.38
HUWE1-211ENST00000480438 AGLP35573 1532 aa23.67■■□□□ 1.38
HUWE1-211ENST00000480438 NPATQ14207 1427 aa23.67■■□□□ 1.38
HUWE1-211ENST00000480438 PPP6R1Q9UPN7 881 aa23.66■■□□□ 1.38
HUWE1-211ENST00000480438 MLH3Q9UHC1 1453 aa23.65■■□□□ 1.38
HUWE1-211ENST00000480438 ZMYM3Q14202 1370 aa23.65■■□□□ 1.38
HUWE1-211ENST00000480438 ARHGAP5Q13017 1502 aa23.64■■□□□ 1.38
HUWE1-211ENST00000480438 MYO5CQ9NQX4 1742 aa23.64■■□□□ 1.37
HUWE1-211ENST00000480438 ABCA6Q8N139 1617 aa23.63■■□□□ 1.37
HUWE1-211ENST00000480438 CDK11AQ9UQ88 783 aaPredicted RBP23.61■■□□□ 1.37
HUWE1-211ENST00000480438 PLA2R1Q13018 1463 aa23.6■■□□□ 1.37
HUWE1-211ENST00000480438 TCOF1Q13428 1488 aaKnown RBP23.58■■□□□ 1.37
HUWE1-211ENST00000480438 KIF14Q15058 1648 aa23.55■■□□□ 1.36
HUWE1-211ENST00000480438 SENP3Q9H4L4 574 aaPredicted RBP23.54■■□□□ 1.36
HUWE1-211ENST00000480438 TROQ12816 1431 aaPredicted RBP23.5■■□□□ 1.35
HUWE1-211ENST00000480438 CEP170BQ9Y4F5 1589 aaPredicted RBP23.48■■□□□ 1.35
HUWE1-211ENST00000480438 MROH2AA6NES4 1674 aa23.48■■□□□ 1.35
HUWE1-211ENST00000480438 PTPRKQ15262 1439 aa23.48■■□□□ 1.35
HUWE1-211ENST00000480438 RGS17Q9UGC6 210 aaPredicted RBP23.47■■□□□ 1.35
HUWE1-211ENST00000480438 CLIP1P30622 1438 aa23.46■■□□□ 1.35
HUWE1-211ENST00000480438 CPS1P31327 1500 aa23.46■■□□□ 1.35
HUWE1-211ENST00000480438 MYO3AQ8NEV4 1616 aa23.46■■□□□ 1.35
HUWE1-211ENST00000480438 SHANK2Q9UPX8 1470 aa23.46■■□□□ 1.35
HUWE1-211ENST00000480438 KIDINS220Q9ULH0 1771 aa23.45■■□□□ 1.34
HUWE1-211ENST00000480438 ZNF142P52746 1687 aaPredicted RBP23.44■■□□□ 1.34
HUWE1-211ENST00000480438 SUPT6HQ7KZ85 1726 aaKnown RBP23.43■■□□□ 1.34
HUWE1-211ENST00000480438 ABCC1P33527 1531 aa23.43■■□□□ 1.34
HUWE1-211ENST00000480438 GGT6Q6P531 493 aa23.42■■□□□ 1.34
HUWE1-211ENST00000480438 CDC42BPBQ9Y5S2 1711 aa23.41■■□□□ 1.34
HUWE1-211ENST00000480438 FMN1Q68DA7 1419 aa23.4■■□□□ 1.34
HUWE1-211ENST00000480438 CLTCQ00610 1675 aaKnown RBP23.38■■□□□ 1.33
HUWE1-211ENST00000480438 SPAG9O60271 1321 aaKnown RBP23.38■■□□□ 1.33
HUWE1-211ENST00000480438 ALKQ9UM73 1620 aa23.37■■□□□ 1.33
HUWE1-211ENST00000480438 ZNF777Q9ULD5 760 aaPredicted RBP23.37■■□□□ 1.33
HUWE1-211ENST00000480438 A2ML1A8K2U0 1454 aa23.36■■□□□ 1.33
HUWE1-211ENST00000480438 ITSN2Q9NZM3 1697 aa23.36■■□□□ 1.33
HUWE1-211ENST00000480438 DNMT1P26358 1616 aaKnown RBP23.33■■□□□ 1.33
HUWE1-211ENST00000480438 SAMD9LQ8IVG5 1584 aa23.33■■□□□ 1.33
HUWE1-211ENST00000480438 HNRNPMP52272 730 aaKnown RBP eCLIP23.33■■□□□ 1.33
HUWE1-211ENST00000480438 ANKLE2Q86XL3 938 aa23.32■■□□□ 1.32
HUWE1-211ENST00000480438 PREX2Q70Z35 1606 aa23.31■■□□□ 1.32
HUWE1-211ENST00000480438 NEURL4Q96JN8 1562 aa23.31■■□□□ 1.32
HUWE1-211ENST00000480438 POTEAQ6S8J7 498 aa23.3■■□□□ 1.32
HUWE1-211ENST00000480438 EHMT2Q96KQ7 1210 aa23.3■■□□□ 1.32
HUWE1-211ENST00000480438 EEA1Q15075 1411 aa23.3■■□□□ 1.32
HUWE1-211ENST00000480438 FBXO31Q5XUX0 539 aaPredicted RBP23.29■■□□□ 1.32
HUWE1-211ENST00000480438 VWDEQ8N2E2 1590 aa23.28■■□□□ 1.32
HUWE1-211ENST00000480438 A2MP01023 1474 aa23.28■■□□□ 1.32
HUWE1-211ENST00000480438 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.27■■□□□ 1.31
HUWE1-211ENST00000480438 UBTFP17480 764 aaKnown RBP23.25■■□□□ 1.31
HUWE1-211ENST00000480438 TNRQ92752 1358 aa23.25■■□□□ 1.31
HUWE1-211ENST00000480438 ARHGAP35Q9NRY4 1499 aa23.24■■□□□ 1.31
HUWE1-211ENST00000480438 POLR1AO95602 1720 aaPredicted RBP23.23■■□□□ 1.31
HUWE1-211ENST00000480438 THEMISQ8N1K5 641 aaPredicted RBP23.23■■□□□ 1.31
HUWE1-211ENST00000480438 NPHP4O75161 1426 aaPredicted RBP23.23■■□□□ 1.31
HUWE1-211ENST00000480438 PLXNC1O60486 1568 aa23.23■■□□□ 1.31
HUWE1-211ENST00000480438 ATP7AQ04656 1500 aa23.22■■□□□ 1.31
HUWE1-211ENST00000480438 SYCP2Q9BX26 1530 aa23.22■■□□□ 1.31
HUWE1-211ENST00000480438 LRRC7Q96NW7 1537 aa23.2■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms