RNA–Protein interactions for RNA: ENST00000479894.1

HDLBP-238, Transcript of high density lipoprotein binding protein, humanhuman

TSL 5

Gene HDLBP, Length 840 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-238ENST00000479894 HECW1Q76N89 1606 aa26.39■■□□□ 1.82
HDLBP-238ENST00000479894 STRCQ7RTU9 1775 aa26.39■■□□□ 1.82
HDLBP-238ENST00000479894 ARHGEF12Q9NZN5 1544 aa26.39■■□□□ 1.81
HDLBP-238ENST00000479894 DMRT2Q9Y5R5 561 aa26.38■■□□□ 1.81
HDLBP-238ENST00000479894 SPATA31D1Q6ZQQ2 1576 aa26.34■■□□□ 1.81
HDLBP-238ENST00000479894 MLECQ14165 292 aa26.34■■□□□ 1.81
HDLBP-238ENST00000479894 ATP10AO60312 1499 aa26.3■■□□□ 1.8
HDLBP-238ENST00000479894 C9orf84Q5VXU9 1444 aa26.29■■□□□ 1.8
HDLBP-238ENST00000479894 SCAPERQ9BY12 1400 aa26.27■■□□□ 1.8
HDLBP-238ENST00000479894 PLCH2O75038 1416 aa26.24■■□□□ 1.79
HDLBP-238ENST00000479894 UHRF1BP1Q6BDS2 1440 aa26.24■■□□□ 1.79
HDLBP-238ENST00000479894 PTPRTO14522 1441 aa26.22■■□□□ 1.79
HDLBP-238ENST00000479894 CSRNP3Q8WYN3 585 aa26.21■■□□□ 1.79
HDLBP-238ENST00000479894 IQSEC2Q5JU85 1478 aa26.2■■□□□ 1.78
HDLBP-238ENST00000479894 CEBPAP49715 358 aaPredicted RBP26.19■■□□□ 1.78
HDLBP-238ENST00000479894 MYO5CQ9NQX4 1742 aa26.19■■□□□ 1.78
HDLBP-238ENST00000479894 LTBP4Q8N2S1 1624 aa26.14■■□□□ 1.78
HDLBP-238ENST00000479894 C3P01024 1663 aa26.13■■□□□ 1.77
HDLBP-238ENST00000479894 REREQ9P2R6 1566 aa26.12■■□□□ 1.77
HDLBP-238ENST00000479894 ZNF518AQ6AHZ1 1483 aa26.12■■□□□ 1.77
HDLBP-238ENST00000479894 EFCAB2Q5VUJ9 269 aa26.12■■□□□ 1.77
HDLBP-238ENST00000479894 CDK13Q14004 1512 aaKnown RBP26.12■■□□□ 1.77
HDLBP-238ENST00000479894 KDM5CP41229 1560 aa26.12■■□□□ 1.77
HDLBP-238ENST00000479894 RANGAP1P46060 587 aaPredicted RBP26.08■■□□□ 1.77
HDLBP-238ENST00000479894 DIP2CQ9Y2E4 1556 aa26.06■■□□□ 1.76
HDLBP-238ENST00000479894 EEA1Q15075 1411 aa26.05■■□□□ 1.76
HDLBP-238ENST00000479894 TRAPPC8Q9Y2L5 1435 aa26.03■■□□□ 1.76
HDLBP-238ENST00000479894 NCOA1Q15788 1441 aa26.02■■□□□ 1.76
HDLBP-238ENST00000479894 AGLP35573 1532 aa26.02■■□□□ 1.76
HDLBP-238ENST00000479894 KIF14Q15058 1648 aa25.99■■□□□ 1.75
HDLBP-238ENST00000479894 ABCA6Q8N139 1617 aa25.99■■□□□ 1.75
HDLBP-238ENST00000479894 MLH3Q9UHC1 1453 aa25.98■■□□□ 1.75
HDLBP-238ENST00000479894 AFAP1Q8N556 730 aa25.97■■□□□ 1.75
HDLBP-238ENST00000479894 CDK11AQ9UQ88 783 aaPredicted RBP25.97■■□□□ 1.75
HDLBP-238ENST00000479894 ARHGAP5Q13017 1502 aa25.97■■□□□ 1.75
HDLBP-238ENST00000479894 ESF1Q9H501 851 aaKnown RBP25.95■■□□□ 1.74
HDLBP-238ENST00000479894 CNTLNQ9NXG0 1405 aa25.95■■□□□ 1.74
HDLBP-238ENST00000479894 CDC42BPBQ9Y5S2 1711 aa25.92■■□□□ 1.74
HDLBP-238ENST00000479894 MYT1LQ9UL68 1186 aa25.92■■□□□ 1.74
HDLBP-238ENST00000479894 MROH2AA6NES4 1674 aa25.92■■□□□ 1.74
HDLBP-238ENST00000479894 FMN1Q68DA7 1419 aa25.91■■□□□ 1.74
HDLBP-238ENST00000479894 TROQ12816 1431 aaPredicted RBP25.9■■□□□ 1.74
HDLBP-238ENST00000479894 CAMSAP1Q5T5Y3 1602 aa25.9■■□□□ 1.74
HDLBP-238ENST00000479894 NPATQ14207 1427 aa25.89■■□□□ 1.74
HDLBP-238ENST00000479894 CLIP1P30622 1438 aa25.88■■□□□ 1.73
HDLBP-238ENST00000479894 KIDINS220Q9ULH0 1771 aa25.86■■□□□ 1.73
HDLBP-238ENST00000479894 ITSN2Q9NZM3 1697 aa25.86■■□□□ 1.73
HDLBP-238ENST00000479894 ABCC1P33527 1531 aa25.84■■□□□ 1.73
HDLBP-238ENST00000479894 UBAP1LF5GYI3 381 aa25.83■■□□□ 1.73
HDLBP-238ENST00000479894 PREX2Q70Z35 1606 aa25.83■■□□□ 1.73
HDLBP-238ENST00000479894 ZNF142P52746 1687 aaPredicted RBP25.82■■□□□ 1.72
HDLBP-238ENST00000479894 SUPT6HQ7KZ85 1726 aaKnown RBP25.81■■□□□ 1.72
HDLBP-238ENST00000479894 ATP1B4Q9UN42 357 aaPredicted RBP25.81■■□□□ 1.72
HDLBP-238ENST00000479894 PLA2R1Q13018 1463 aa25.8■■□□□ 1.72
HDLBP-238ENST00000479894 LRRIQ1Q96JM4 1722 aa25.8■■□□□ 1.72
HDLBP-238ENST00000479894 ZNF335Q9H4Z2 1342 aaPredicted RBP25.79■■□□□ 1.72
HDLBP-238ENST00000479894 PKD2Q13563 968 aa25.77■■□□□ 1.72
HDLBP-238ENST00000479894 ZMYM3Q14202 1370 aa25.76■■□□□ 1.71
HDLBP-238ENST00000479894 NCKAP5LQ9HCH0 1330 aa25.75■■□□□ 1.71
HDLBP-238ENST00000479894 MYO3AQ8NEV4 1616 aa25.74■■□□□ 1.71
HDLBP-238ENST00000479894 ARHGAP35Q9NRY4 1499 aa25.74■■□□□ 1.71
HDLBP-238ENST00000479894 TCOF1Q13428 1488 aaKnown RBP25.73■■□□□ 1.71
HDLBP-238ENST00000479894 CDC42BPAQ5VT25 1732 aa25.71■■□□□ 1.71
HDLBP-238ENST00000479894 MED1Q15648 1581 aaPredicted RBP25.71■■□□□ 1.71
HDLBP-238ENST00000479894 CEP170BQ9Y4F5 1589 aaPredicted RBP25.7■■□□□ 1.71
HDLBP-238ENST00000479894 CLTCQ00610 1675 aaKnown RBP25.69■■□□□ 1.7
HDLBP-238ENST00000479894 SAMD9LQ8IVG5 1584 aa25.69■■□□□ 1.7
HDLBP-238ENST00000479894 PTPRKQ15262 1439 aa25.63■■□□□ 1.69
HDLBP-238ENST00000479894 PPP6R1Q9UPN7 881 aa25.63■■□□□ 1.69
HDLBP-238ENST00000479894 CCDC18Q5T9S5 1454 aa25.63■■□□□ 1.69
HDLBP-238ENST00000479894 PLXNC1O60486 1568 aa25.62■■□□□ 1.69
HDLBP-238ENST00000479894 UBTFP17480 764 aaKnown RBP25.6■■□□□ 1.69
HDLBP-238ENST00000479894 CPS1P31327 1500 aa25.59■■□□□ 1.69
HDLBP-238ENST00000479894 HSPA1LP34931 641 aa25.59■■□□□ 1.69
HDLBP-238ENST00000479894 POLR1AO95602 1720 aaPredicted RBP25.59■■□□□ 1.69
HDLBP-238ENST00000479894 TOM1O60784 492 aa25.58■■□□□ 1.69
HDLBP-238ENST00000479894 SPAG9O60271 1321 aaKnown RBP25.58■■□□□ 1.69
HDLBP-238ENST00000479894 ATP7AQ04656 1500 aa25.58■■□□□ 1.68
HDLBP-238ENST00000479894 SYCP2Q9BX26 1530 aa25.57■■□□□ 1.68
HDLBP-238ENST00000479894 INO80Q9ULG1 1556 aaPredicted RBP25.56■■□□□ 1.68
HDLBP-238ENST00000479894 DNMT1P26358 1616 aaKnown RBP25.55■■□□□ 1.68
HDLBP-238ENST00000479894 A2ML1A8K2U0 1454 aa25.54■■□□□ 1.68
HDLBP-238ENST00000479894 A2MP01023 1474 aa25.54■■□□□ 1.68
HDLBP-238ENST00000479894 CASKIN1Q8WXD9 1431 aa25.53■■□□□ 1.68
HDLBP-238ENST00000479894 SCAF1Q9H7N4 1312 aaKnown RBP25.52■■□□□ 1.68
HDLBP-238ENST00000479894 KIAA1107Q9UPP5 1409 aa25.51■■□□□ 1.67
HDLBP-238ENST00000479894 ADGBQ8N7X0 1667 aa25.51■■□□□ 1.67
HDLBP-238ENST00000479894 PIP4K2BP78356 416 aa25.5■■□□□ 1.67
HDLBP-238ENST00000479894 PLEKHH2Q8IVE3 1493 aa25.49■■□□□ 1.67
HDLBP-238ENST00000479894 SHANK2Q9UPX8 1470 aa25.49■■□□□ 1.67
HDLBP-238ENST00000479894 NEURL4Q96JN8 1562 aa25.48■■□□□ 1.67
HDLBP-238ENST00000479894 GPATCH8Q9UKJ3 1502 aaKnown RBP25.48■■□□□ 1.67
HDLBP-238ENST00000479894 ZNF777Q9ULD5 760 aaPredicted RBP25.48■■□□□ 1.67
HDLBP-238ENST00000479894 GGT6Q6P531 493 aa25.47■■□□□ 1.67
HDLBP-238ENST00000479894 PHF23Q9BUL5 403 aaPredicted RBP25.46■■□□□ 1.67
HDLBP-238ENST00000479894 HNRNPMP52272 730 aaKnown RBP eCLIP25.45■■□□□ 1.66
HDLBP-238ENST00000479894 CHIC1Q5VXU3 224 aa25.44■■□□□ 1.66
HDLBP-238ENST00000479894 VWDEQ8N2E2 1590 aa25.41■■□□□ 1.66
HDLBP-238ENST00000479894 ALKQ9UM73 1620 aa25.41■■□□□ 1.66
HDLBP-238ENST00000479894 EHMT2Q96KQ7 1210 aa25.4■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms