RNA–Protein interactions for RNA: ENST00000478279.5

APTX-222, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 684 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-222ENST00000478279 PLCH2O75038 1416 aa17.86■□□□□ 0.45
APTX-222ENST00000478279 ARHGEF12Q9NZN5 1544 aa17.86■□□□□ 0.45
APTX-222ENST00000478279 ATP10AO60312 1499 aa17.85■□□□□ 0.45
APTX-222ENST00000478279 DMRT2Q9Y5R5 561 aa17.84■□□□□ 0.45
APTX-222ENST00000478279 PREX1Q8TCU6 1659 aa17.83■□□□□ 0.45
APTX-222ENST00000478279 EEA1Q15075 1411 aa17.83■□□□□ 0.45
APTX-222ENST00000478279 C9orf84Q5VXU9 1444 aa17.82■□□□□ 0.44
APTX-222ENST00000478279 CEBPAP49715 358 aaPredicted RBP17.82■□□□□ 0.44
APTX-222ENST00000478279 CDK13Q14004 1512 aaKnown RBP17.82■□□□□ 0.44
APTX-222ENST00000478279 DISP3Q9P2K9 1392 aa17.81■□□□□ 0.44
APTX-222ENST00000478279 EFCAB2Q5VUJ9 269 aa17.81■□□□□ 0.44
APTX-222ENST00000478279 ILDR2Q71H61 639 aa17.8■□□□□ 0.44
APTX-222ENST00000478279 SETD1BQ9UPS6 1966 aaKnown RBP17.8■□□□□ 0.44
APTX-222ENST00000478279 SOCS7O14512 581 aa17.79■□□□□ 0.44
APTX-222ENST00000478279 STRCQ7RTU9 1775 aa17.78■□□□□ 0.44
APTX-222ENST00000478279 UHRF1BP1Q6BDS2 1440 aa17.76■□□□□ 0.43
APTX-222ENST00000478279 MYO5CQ9NQX4 1742 aa17.75■□□□□ 0.43
APTX-222ENST00000478279 CDK11AQ9UQ88 783 aaPredicted RBP17.74■□□□□ 0.43
APTX-222ENST00000478279 ZNF518AQ6AHZ1 1483 aa17.74■□□□□ 0.43
APTX-222ENST00000478279 AFAP1Q8N556 730 aa17.73■□□□□ 0.43
APTX-222ENST00000478279 ATP1B4Q9UN42 357 aaPredicted RBP17.73■□□□□ 0.43
APTX-222ENST00000478279 PTPRTO14522 1441 aa17.72■□□□□ 0.43
APTX-222ENST00000478279 KDM5CP41229 1560 aa17.7■□□□□ 0.42
APTX-222ENST00000478279 MYT1LQ9UL68 1186 aa17.7■□□□□ 0.42
APTX-222ENST00000478279 FMN1Q68DA7 1419 aa17.69■□□□□ 0.42
APTX-222ENST00000478279 KIF14Q15058 1648 aa17.68■□□□□ 0.42
APTX-222ENST00000478279 ARHGAP5Q13017 1502 aa17.67■□□□□ 0.42
APTX-222ENST00000478279 REREQ9P2R6 1566 aa17.67■□□□□ 0.42
APTX-222ENST00000478279 DIP2CQ9Y2E4 1556 aa17.67■□□□□ 0.42
APTX-222ENST00000478279 TROQ12816 1431 aaPredicted RBP17.66■□□□□ 0.42
APTX-222ENST00000478279 C3P01024 1663 aa17.65■□□□□ 0.42
APTX-222ENST00000478279 MLH3Q9UHC1 1453 aa17.65■□□□□ 0.42
APTX-222ENST00000478279 ESF1Q9H501 851 aaKnown RBP17.65■□□□□ 0.42
APTX-222ENST00000478279 SPATA31D1Q6ZQQ2 1576 aa17.65■□□□□ 0.42
APTX-222ENST00000478279 CLIP1P30622 1438 aa17.64■□□□□ 0.41
APTX-222ENST00000478279 TRAPPC8Q9Y2L5 1435 aa17.64■□□□□ 0.41
APTX-222ENST00000478279 AGLP35573 1532 aa17.63■□□□□ 0.41
APTX-222ENST00000478279 LTBP4Q8N2S1 1624 aa17.63■□□□□ 0.41
APTX-222ENST00000478279 ABCA6Q8N139 1617 aa17.62■□□□□ 0.41
APTX-222ENST00000478279 UBTFP17480 764 aaKnown RBP17.62■□□□□ 0.41
APTX-222ENST00000478279 IQSEC2Q5JU85 1478 aa17.62■□□□□ 0.41
APTX-222ENST00000478279 ARHGAP35Q9NRY4 1499 aa17.62■□□□□ 0.41
APTX-222ENST00000478279 CDC42BPBQ9Y5S2 1711 aa17.6■□□□□ 0.41
APTX-222ENST00000478279 NCOA1Q15788 1441 aa17.59■□□□□ 0.41
APTX-222ENST00000478279 CNTLNQ9NXG0 1405 aa17.58■□□□□ 0.41
APTX-222ENST00000478279 EHMT2Q96KQ7 1210 aa17.57■□□□□ 0.4
APTX-222ENST00000478279 ABCC1P33527 1531 aa17.56■□□□□ 0.4
APTX-222ENST00000478279 PREX2Q70Z35 1606 aa17.54■□□□□ 0.4
APTX-222ENST00000478279 KIDINS220Q9ULH0 1771 aa17.54■□□□□ 0.4
APTX-222ENST00000478279 LRRIQ1Q96JM4 1722 aa17.54■□□□□ 0.4
APTX-222ENST00000478279 ITSN2Q9NZM3 1697 aa17.54■□□□□ 0.4
APTX-222ENST00000478279 NPATQ14207 1427 aa17.53■□□□□ 0.4
APTX-222ENST00000478279 CAMSAP1Q5T5Y3 1602 aa17.52■□□□□ 0.4
APTX-222ENST00000478279 ZMYM3Q14202 1370 aa17.51■□□□□ 0.39
APTX-222ENST00000478279 NCKAP5LQ9HCH0 1330 aa17.5■□□□□ 0.39
APTX-222ENST00000478279 MROH2AA6NES4 1674 aa17.5■□□□□ 0.39
APTX-222ENST00000478279 UBAP1LF5GYI3 381 aa17.49■□□□□ 0.39
APTX-222ENST00000478279 ZNF335Q9H4Z2 1342 aaPredicted RBP17.47■□□□□ 0.39
APTX-222ENST00000478279 CCDC18Q5T9S5 1454 aa17.47■□□□□ 0.39
APTX-222ENST00000478279 SAMD9LQ8IVG5 1584 aa17.47■□□□□ 0.39
APTX-222ENST00000478279 CDC42BPAQ5VT25 1732 aa17.47■□□□□ 0.39
APTX-222ENST00000478279 PKD2Q13563 968 aa17.46■□□□□ 0.39
APTX-222ENST00000478279 CASKIN1Q8WXD9 1431 aa17.46■□□□□ 0.39
APTX-222ENST00000478279 SPAG9O60271 1321 aaKnown RBP17.46■□□□□ 0.38
APTX-222ENST00000478279 ZNF777Q9ULD5 760 aaPredicted RBP17.45■□□□□ 0.38
APTX-222ENST00000478279 PLA2R1Q13018 1463 aa17.44■□□□□ 0.38
APTX-222ENST00000478279 SUPT6HQ7KZ85 1726 aaKnown RBP17.42■□□□□ 0.38
APTX-222ENST00000478279 HNRNPMP52272 730 aaKnown RBP eCLIP17.42■□□□□ 0.38
APTX-222ENST00000478279 PTPRKQ15262 1439 aa17.41■□□□□ 0.38
APTX-222ENST00000478279 TCOF1Q13428 1488 aaKnown RBP17.41■□□□□ 0.38
APTX-222ENST00000478279 ZNF142P52746 1687 aaPredicted RBP17.41■□□□□ 0.38
APTX-222ENST00000478279 CLTCQ00610 1675 aaKnown RBP17.41■□□□□ 0.38
APTX-222ENST00000478279 SYCP2Q9BX26 1530 aa17.41■□□□□ 0.38
APTX-222ENST00000478279 GPATCH8Q9UKJ3 1502 aaKnown RBP17.4■□□□□ 0.38
APTX-222ENST00000478279 CEP170BQ9Y4F5 1589 aaPredicted RBP17.4■□□□□ 0.38
APTX-222ENST00000478279 MYO3AQ8NEV4 1616 aa17.39■□□□□ 0.38
APTX-222ENST00000478279 PPP6R1Q9UPN7 881 aa17.39■□□□□ 0.37
APTX-222ENST00000478279 A2MP01023 1474 aa17.38■□□□□ 0.37
APTX-222ENST00000478279 ATP7AQ04656 1500 aa17.38■□□□□ 0.37
APTX-222ENST00000478279 PLXNC1O60486 1568 aa17.38■□□□□ 0.37
APTX-222ENST00000478279 GGT6Q6P531 493 aa17.38■□□□□ 0.37
APTX-222ENST00000478279 KIAA1107Q9UPP5 1409 aa17.38■□□□□ 0.37
APTX-222ENST00000478279 PLEKHH2Q8IVE3 1493 aa17.36■□□□□ 0.37
APTX-222ENST00000478279 CFDP1Q9UEE9 299 aaPredicted RBP17.35■□□□□ 0.37
APTX-222ENST00000478279 FYCO1Q9BQS8 1478 aa17.35■□□□□ 0.37
APTX-222ENST00000478279 INO80Q9ULG1 1556 aaPredicted RBP17.35■□□□□ 0.37
APTX-222ENST00000478279 A2ML1A8K2U0 1454 aa17.32■□□□□ 0.36
APTX-222ENST00000478279 HSPA1LP34931 641 aa17.32■□□□□ 0.36
APTX-222ENST00000478279 TOM1O60784 492 aa17.31■□□□□ 0.36
APTX-222ENST00000478279 CCNB3Q8WWL7 1395 aa17.3■□□□□ 0.36
APTX-222ENST00000478279 SCAF1Q9H7N4 1312 aaKnown RBP17.3■□□□□ 0.36
APTX-222ENST00000478279 DNMT1P26358 1616 aaKnown RBP17.3■□□□□ 0.36
APTX-222ENST00000478279 PIP4K2BP78356 416 aa17.3■□□□□ 0.36
APTX-222ENST00000478279 CHIC1Q5VXU3 224 aa17.29■□□□□ 0.36
APTX-222ENST00000478279 ADGBQ8N7X0 1667 aa17.29■□□□□ 0.36
APTX-222ENST00000478279 CPS1P31327 1500 aa17.28■□□□□ 0.36
APTX-222ENST00000478279 MED1Q15648 1581 aaPredicted RBP17.28■□□□□ 0.36
APTX-222ENST00000478279 SHANK2Q9UPX8 1470 aa17.26■□□□□ 0.35
APTX-222ENST00000478279 TNRQ92752 1358 aa17.25■□□□□ 0.35
APTX-222ENST00000478279 POLR1AO95602 1720 aaPredicted RBP17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms