RNA–Protein interactions for RNA: ENST00000478219.1

COL13A1-207, Transcript of collagen type XIII alpha 1 chain, humanhuman

TSL 2

Gene COL13A1, Length 2,586 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-207ENST00000478219 TCERG1O14776 1098 aaKnown RBP13.17□□□□□ -0.3
COL13A1-207ENST00000478219 L3MBTL2Q969R5 705 aa13.17□□□□□ -0.3
COL13A1-207ENST00000478219 FGD6Q6ZV73 1430 aa13.16□□□□□ -0.3
COL13A1-207ENST00000478219 DCAF11Q8TEB1 546 aa13.16□□□□□ -0.3
COL13A1-207ENST00000478219 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.16□□□□□ -0.3
COL13A1-207ENST00000478219 PKNOX2Q96KN3 472 aa13.16□□□□□ -0.3
COL13A1-207ENST00000478219 IGF1RP08069 1367 aa13.15□□□□□ -0.3
COL13A1-207ENST00000478219 FOXD1Q16676 465 aa13.15□□□□□ -0.3
COL13A1-207ENST00000478219 NBPF8Q3BBV2 869 aa13.14□□□□□ -0.31
COL13A1-207ENST00000478219 CADPSQ9ULU8 1353 aa13.14□□□□□ -0.31
COL13A1-207ENST00000478219 FHOD3Q2V2M9 1422 aa13.13□□□□□ -0.31
COL13A1-207ENST00000478219 RRP1P56182 461 aaKnown RBP13.12□□□□□ -0.31
COL13A1-207ENST00000478219 RRP7BPQ9NSQ0 103 aa13.12□□□□□ -0.31
COL13A1-207ENST00000478219 DHX29Q7Z478 1369 aaKnown RBP13.11□□□□□ -0.31
COL13A1-207ENST00000478219 RSPH6AQ9H0K4 717 aa13.1□□□□□ -0.31
COL13A1-207ENST00000478219 PNISRQ8TF01 805 aaKnown RBP13.09□□□□□ -0.31
COL13A1-207ENST00000478219 CHIC2Q9UKJ5 165 aa13.09□□□□□ -0.31
COL13A1-207ENST00000478219 FMN1Q68DA7 1419 aa13.09□□□□□ -0.31
COL13A1-207ENST00000478219 FRAT2O75474 233 aaPredicted RBP13.08□□□□□ -0.32
COL13A1-207ENST00000478219 POLR3GLQ9BT43 218 aa13.08□□□□□ -0.32
COL13A1-207ENST00000478219 CARMIL1Q5VZK9 1371 aa13.08□□□□□ -0.32
COL13A1-207ENST00000478219 MS4A1P11836 297 aa13.08□□□□□ -0.32
COL13A1-207ENST00000478219 SPATA31E1Q6ZUB1 1445 aa13.07□□□□□ -0.32
COL13A1-207ENST00000478219 FAM43AQ8N2R8 423 aa13.07□□□□□ -0.32
COL13A1-207ENST00000478219 KDM6BO15054 1643 aa13.06□□□□□ -0.32
COL13A1-207ENST00000478219 EFCAB5A4FU69 1503 aa13.06□□□□□ -0.32
COL13A1-207ENST00000478219 ABCA5Q8WWZ7 1642 aa13.05□□□□□ -0.32
COL13A1-207ENST00000478219 PLIN1O60240 522 aa13.05□□□□□ -0.32
COL13A1-207ENST00000478219 FYCO1Q9BQS8 1478 aa13.05□□□□□ -0.32
COL13A1-207ENST00000478219 RCAN3Q9UKA8 241 aa13.04□□□□□ -0.32
COL13A1-207ENST00000478219 RRAGDQ9NQL2 400 aaPredicted RBP13.04□□□□□ -0.32
COL13A1-207ENST00000478219 DDRGK1Q96HY6 314 aa13.03□□□□□ -0.32
COL13A1-207ENST00000478219 MPHOSPH9Q99550 1183 aa13.03□□□□□ -0.32
COL13A1-207ENST00000478219 CASKIN1Q8WXD9 1431 aa13.03□□□□□ -0.32
COL13A1-207ENST00000478219 LAMC3Q9Y6N6 1575 aa13.03□□□□□ -0.32
COL13A1-207ENST00000478219 FGD5Q6ZNL6 1462 aa13.02□□□□□ -0.33
COL13A1-207ENST00000478219 POLR1AO95602 1720 aaPredicted RBP13.02□□□□□ -0.33
COL13A1-207ENST00000478219 TMC1Q8TDI8 760 aa13.02□□□□□ -0.33
COL13A1-207ENST00000478219 MTUS2Q5JR59 1369 aa13.01□□□□□ -0.33
COL13A1-207ENST00000478219 ZMYND15Q9H091 742 aa13.01□□□□□ -0.33
COL13A1-207ENST00000478219 BCORL1Q5H9F3 1711 aa13□□□□□ -0.33
COL13A1-207ENST00000478219 CDCA7LQ96GN5 454 aa13□□□□□ -0.33
COL13A1-207ENST00000478219 HECW1Q76N89 1606 aa13□□□□□ -0.33
COL13A1-207ENST00000478219 VSIG10Q8N0Z9 540 aa12.99□□□□□ -0.33
COL13A1-207ENST00000478219 CUL7Q14999 1698 aa12.99□□□□□ -0.33
COL13A1-207ENST00000478219 CTTNBP2Q8WZ74 1663 aa12.99□□□□□ -0.33
COL13A1-207ENST00000478219 TEX14Q8IWB6 1497 aa12.98□□□□□ -0.33
COL13A1-207ENST00000478219 MYOM3Q5VTT5 1437 aa12.98□□□□□ -0.33
COL13A1-207ENST00000478219 CRBNQ96SW2 442 aa12.98□□□□□ -0.33
COL13A1-207ENST00000478219 POGKQ9P215 609 aa12.97□□□□□ -0.33
COL13A1-207ENST00000478219 LRPPRCP42704 1394 aaKnown RBP12.97□□□□□ -0.33
COL13A1-207ENST00000478219 FANCD2Q9BXW9 1451 aa12.97□□□□□ -0.33
COL13A1-207ENST00000478219 LRRIQ1Q96JM4 1722 aa12.96□□□□□ -0.33
COL13A1-207ENST00000478219 C20orf194Q5TEA3 1177 aa12.95□□□□□ -0.34
COL13A1-207ENST00000478219 SNAPC4Q5SXM2 1469 aa12.95□□□□□ -0.34
COL13A1-207ENST00000478219 C8orf34Q49A92 452 aa12.94□□□□□ -0.34
COL13A1-207ENST00000478219 ANKRD30BQ9BXX2 1392 aa12.94□□□□□ -0.34
COL13A1-207ENST00000478219 ABCA10Q8WWZ4 1543 aa12.94□□□□□ -0.34
COL13A1-207ENST00000478219 RPRD2Q5VT52 1461 aaKnown RBP12.94□□□□□ -0.34
COL13A1-207ENST00000478219 DNMBPQ6XZF7 1577 aa12.93□□□□□ -0.34
COL13A1-207ENST00000478219 GCC2Q8IWJ2 1684 aa12.93□□□□□ -0.34
COL13A1-207ENST00000478219 ZNF326Q5BKZ1 582 aaKnown RBP12.92□□□□□ -0.34
COL13A1-207ENST00000478219 PDS5BQ9NTI5 1447 aa12.92□□□□□ -0.34
COL13A1-207ENST00000478219 THOC2Q8NI27 1593 aaKnown RBP12.92□□□□□ -0.34
COL13A1-207ENST00000478219 KCNA4P22459 653 aa12.92□□□□□ -0.34
COL13A1-207ENST00000478219 USP47Q96K76 1375 aa12.91□□□□□ -0.34
COL13A1-207ENST00000478219 ARXQ96QS3 562 aa12.91□□□□□ -0.34
COL13A1-207ENST00000478219 KDM2BQ8NHM5 1336 aa12.91□□□□□ -0.34
COL13A1-207ENST00000478219 MIA2Q96PC5 1412 aa12.9□□□□□ -0.34
COL13A1-207ENST00000478219 AMER1Q5JTC6 1135 aaPredicted RBP12.89□□□□□ -0.35
COL13A1-207ENST00000478219 KIF21AQ7Z4S6 1674 aa12.88□□□□□ -0.35
COL13A1-207ENST00000478219 FAM161AQ3B820 660 aa12.88□□□□□ -0.35
COL13A1-207ENST00000478219 MAGI3Q5TCQ9 1506 aa12.88□□□□□ -0.35
COL13A1-207ENST00000478219 GLIPR1L2Q4G1C9 344 aa12.87□□□□□ -0.35
COL13A1-207ENST00000478219 NAP1L5Q96NT1 182 aaPredicted RBP12.87□□□□□ -0.35
COL13A1-207ENST00000478219 SAMD9Q5K651 1589 aa12.87□□□□□ -0.35
COL13A1-207ENST00000478219 MYBBP1AQ9BQG0 1328 aaKnown RBP12.86□□□□□ -0.35
COL13A1-207ENST00000478219 SUPT6HQ7KZ85 1726 aaKnown RBP12.86□□□□□ -0.35
COL13A1-207ENST00000478219 BRD4O60885 1362 aaPredicted RBP12.86□□□□□ -0.35
COL13A1-207ENST00000478219 RGS3P49796 1198 aa12.86□□□□□ -0.35
COL13A1-207ENST00000478219 UGGT2Q9NYU1 1516 aa12.86□□□□□ -0.35
COL13A1-207ENST00000478219 HSP90AA2PQ14568 343 aaPredicted RBP12.85□□□□□ -0.35
COL13A1-207ENST00000478219 SLC4A1APQ9BWU0 796 aaKnown RBP12.84□□□□□ -0.35
COL13A1-207ENST00000478219 KTN1Q86UP2 1357 aaKnown RBP12.84□□□□□ -0.35
COL13A1-207ENST00000478219 KIF15Q9NS87 1388 aa12.84□□□□□ -0.35
COL13A1-207ENST00000478219 TOPBP1Q92547 1522 aa12.84□□□□□ -0.35
COL13A1-207ENST00000478219 PANK2Q9BZ23 570 aa12.84□□□□□ -0.35
COL13A1-207ENST00000478219 EHBP1L1Q8N3D4 1523 aa12.84□□□□□ -0.35
COL13A1-207ENST00000478219 POLA1P09884 1462 aaPredicted RBP12.84□□□□□ -0.35
COL13A1-207ENST00000478219 NESP48681 1621 aa12.83□□□□□ -0.36
COL13A1-207ENST00000478219 USP19O94966 1318 aa12.83□□□□□ -0.36
COL13A1-207ENST00000478219 SLKQ9H2G2 1235 aaPredicted RBP12.83□□□□□ -0.36
COL13A1-207ENST00000478219 KDM5CP41229 1560 aa12.83□□□□□ -0.36
COL13A1-207ENST00000478219 ARHGEF11O15085 1522 aa12.82□□□□□ -0.36
COL13A1-207ENST00000478219 XRCC6P12956 609 aaKnown RBP eCLIP12.82□□□□□ -0.36
COL13A1-207ENST00000478219 PDE3BQ13370 1112 aa12.82□□□□□ -0.36
COL13A1-207ENST00000478219 GRIN2BQ13224 1484 aa12.82□□□□□ -0.36
COL13A1-207ENST00000478219 TCOF1Q13428 1488 aaKnown RBP12.82□□□□□ -0.36
COL13A1-207ENST00000478219 MBD5Q9P267 1494 aa12.81□□□□□ -0.36
COL13A1-207ENST00000478219 PLEKHG5O94827 1062 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms