RNA–Protein interactions for RNA: ENST00000477817.1

PKP1-205, Transcript of plakophilin 1, humanhuman

TSL 1 (best)

Gene PKP1, Length 631 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP1-205ENST00000477817 MAGI2Q86UL8 1455 aa19.53■□□□□ 0.72
PKP1-205ENST00000477817 PRXQ9BXM0 1461 aa19.53■□□□□ 0.72
PKP1-205ENST00000477817 UHRF1BP1Q6BDS2 1440 aa19.52■□□□□ 0.72
PKP1-205ENST00000477817 HECW1Q76N89 1606 aa19.51■□□□□ 0.71
PKP1-205ENST00000477817 STRCQ7RTU9 1775 aa19.49■□□□□ 0.71
PKP1-205ENST00000477817 NUP153P49790 1475 aaKnown RBP19.49■□□□□ 0.71
PKP1-205ENST00000477817 SAMD9Q5K651 1589 aa19.49■□□□□ 0.71
PKP1-205ENST00000477817 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.48■□□□□ 0.71
PKP1-205ENST00000477817 ESF1Q9H501 851 aaKnown RBP19.48■□□□□ 0.71
PKP1-205ENST00000477817 SCAPERQ9BY12 1400 aa19.48■□□□□ 0.71
PKP1-205ENST00000477817 ATP10AO60312 1499 aa19.47■□□□□ 0.71
PKP1-205ENST00000477817 ARHGEF12Q9NZN5 1544 aa19.46■□□□□ 0.71
PKP1-205ENST00000477817 C9orf84Q5VXU9 1444 aa19.45■□□□□ 0.7
PKP1-205ENST00000477817 PTPRTO14522 1441 aa19.42■□□□□ 0.7
PKP1-205ENST00000477817 SETD1BQ9UPS6 1966 aaKnown RBP19.41■□□□□ 0.7
PKP1-205ENST00000477817 ATP1B4Q9UN42 357 aaPredicted RBP19.39■□□□□ 0.69
PKP1-205ENST00000477817 UBAP1LF5GYI3 381 aa19.38■□□□□ 0.69
PKP1-205ENST00000477817 EFCAB2Q5VUJ9 269 aa19.38■□□□□ 0.69
PKP1-205ENST00000477817 IQSEC2Q5JU85 1478 aa19.35■□□□□ 0.69
PKP1-205ENST00000477817 PLCH2O75038 1416 aa19.35■□□□□ 0.69
PKP1-205ENST00000477817 CSRNP3Q8WYN3 585 aa19.34■□□□□ 0.69
PKP1-205ENST00000477817 LTBP4Q8N2S1 1624 aa19.33■□□□□ 0.68
PKP1-205ENST00000477817 SCAF1Q9H7N4 1312 aaKnown RBP19.32■□□□□ 0.68
PKP1-205ENST00000477817 MYO5CQ9NQX4 1742 aa19.32■□□□□ 0.68
PKP1-205ENST00000477817 CDK13Q14004 1512 aaKnown RBP19.3■□□□□ 0.68
PKP1-205ENST00000477817 C3P01024 1663 aa19.3■□□□□ 0.68
PKP1-205ENST00000477817 ZNF518AQ6AHZ1 1483 aa19.3■□□□□ 0.68
PKP1-205ENST00000477817 AFAP1Q8N556 730 aa19.29■□□□□ 0.68
PKP1-205ENST00000477817 TRAPPC8Q9Y2L5 1435 aa19.28■□□□□ 0.68
PKP1-205ENST00000477817 CDK11AQ9UQ88 783 aaPredicted RBP19.28■□□□□ 0.68
PKP1-205ENST00000477817 ARHGAP5Q13017 1502 aa19.26■□□□□ 0.67
PKP1-205ENST00000477817 NCOA1Q15788 1441 aa19.25■□□□□ 0.67
PKP1-205ENST00000477817 ZNF335Q9H4Z2 1342 aaPredicted RBP19.24■□□□□ 0.67
PKP1-205ENST00000477817 CAMSAP1Q5T5Y3 1602 aa19.23■□□□□ 0.67
PKP1-205ENST00000477817 DIP2CQ9Y2E4 1556 aa19.23■□□□□ 0.67
PKP1-205ENST00000477817 NCKAP5LQ9HCH0 1330 aa19.23■□□□□ 0.67
PKP1-205ENST00000477817 PHF23Q9BUL5 403 aaPredicted RBP19.22■□□□□ 0.67
PKP1-205ENST00000477817 PIP4K2BP78356 416 aa19.2■□□□□ 0.66
PKP1-205ENST00000477817 CNTLNQ9NXG0 1405 aa19.19■□□□□ 0.66
PKP1-205ENST00000477817 KDM5CP41229 1560 aa19.19■□□□□ 0.66
PKP1-205ENST00000477817 KIF14Q15058 1648 aa19.18■□□□□ 0.66
PKP1-205ENST00000477817 ABCA6Q8N139 1617 aa19.18■□□□□ 0.66
PKP1-205ENST00000477817 SUPT6HQ7KZ85 1726 aaKnown RBP19.17■□□□□ 0.66
PKP1-205ENST00000477817 CLIP1P30622 1438 aa19.17■□□□□ 0.66
PKP1-205ENST00000477817 REREQ9P2R6 1566 aa19.16■□□□□ 0.66
PKP1-205ENST00000477817 AGLP35573 1532 aa19.15■□□□□ 0.66
PKP1-205ENST00000477817 MED1Q15648 1581 aaPredicted RBP19.15■□□□□ 0.66
PKP1-205ENST00000477817 HSPA1LP34931 641 aa19.14■□□□□ 0.65
PKP1-205ENST00000477817 PKD2Q13563 968 aa19.14■□□□□ 0.65
PKP1-205ENST00000477817 MLH3Q9UHC1 1453 aa19.12■□□□□ 0.65
PKP1-205ENST00000477817 TOM1O60784 492 aa19.12■□□□□ 0.65
PKP1-205ENST00000477817 EHMT2Q96KQ7 1210 aa19.12■□□□□ 0.65
PKP1-205ENST00000477817 PPP6R1Q9UPN7 881 aa19.12■□□□□ 0.65
PKP1-205ENST00000477817 NPATQ14207 1427 aa19.1■□□□□ 0.65
PKP1-205ENST00000477817 FMN1Q68DA7 1419 aa19.09■□□□□ 0.65
PKP1-205ENST00000477817 ZMYM3Q14202 1370 aa19.09■□□□□ 0.65
PKP1-205ENST00000477817 TROQ12816 1431 aaPredicted RBP19.08■□□□□ 0.65
PKP1-205ENST00000477817 EEA1Q15075 1411 aa19.08■□□□□ 0.64
PKP1-205ENST00000477817 SENP3Q9H4L4 574 aaPredicted RBP19.07■□□□□ 0.64
PKP1-205ENST00000477817 MROH2AA6NES4 1674 aa19.07■□□□□ 0.64
PKP1-205ENST00000477817 UBTFP17480 764 aaKnown RBP19.06■□□□□ 0.64
PKP1-205ENST00000477817 CDC42BPBQ9Y5S2 1711 aa19.05■□□□□ 0.64
PKP1-205ENST00000477817 ZNF777Q9ULD5 760 aaPredicted RBP19.05■□□□□ 0.64
PKP1-205ENST00000477817 ITSN2Q9NZM3 1697 aa19.05■□□□□ 0.64
PKP1-205ENST00000477817 MYO3AQ8NEV4 1616 aa19.03■□□□□ 0.64
PKP1-205ENST00000477817 PLA2R1Q13018 1463 aa19.03■□□□□ 0.64
PKP1-205ENST00000477817 CLTCQ00610 1675 aaKnown RBP19.03■□□□□ 0.64
PKP1-205ENST00000477817 CEP170BQ9Y4F5 1589 aaPredicted RBP19.02■□□□□ 0.64
PKP1-205ENST00000477817 KIDINS220Q9ULH0 1771 aa19.02■□□□□ 0.64
PKP1-205ENST00000477817 ABCC1P33527 1531 aa19.02■□□□□ 0.64
PKP1-205ENST00000477817 GGT6Q6P531 493 aa19.01■□□□□ 0.63
PKP1-205ENST00000477817 ZNF142P52746 1687 aaPredicted RBP19.01■□□□□ 0.63
PKP1-205ENST00000477817 PREX2Q70Z35 1606 aa19■□□□□ 0.63
PKP1-205ENST00000477817 SPAG9O60271 1321 aaKnown RBP19■□□□□ 0.63
PKP1-205ENST00000477817 TCOF1Q13428 1488 aaKnown RBP18.98■□□□□ 0.63
PKP1-205ENST00000477817 CPS1P31327 1500 aa18.96■□□□□ 0.63
PKP1-205ENST00000477817 PTPRKQ15262 1439 aa18.94■□□□□ 0.62
PKP1-205ENST00000477817 SAMD9LQ8IVG5 1584 aa18.93■□□□□ 0.62
PKP1-205ENST00000477817 HNRNPMP52272 730 aaKnown RBP eCLIP18.92■□□□□ 0.62
PKP1-205ENST00000477817 SHANK2Q9UPX8 1470 aa18.91■□□□□ 0.62
PKP1-205ENST00000477817 POLR1AO95602 1720 aaPredicted RBP18.91■□□□□ 0.62
PKP1-205ENST00000477817 LRRIQ1Q96JM4 1722 aa18.91■□□□□ 0.62
PKP1-205ENST00000477817 A2ML1A8K2U0 1454 aa18.9■□□□□ 0.62
PKP1-205ENST00000477817 ARHGAP35Q9NRY4 1499 aa18.9■□□□□ 0.62
PKP1-205ENST00000477817 CDC42BPAQ5VT25 1732 aa18.9■□□□□ 0.62
PKP1-205ENST00000477817 A2MP01023 1474 aa18.89■□□□□ 0.61
PKP1-205ENST00000477817 SYCP2Q9BX26 1530 aa18.89■□□□□ 0.61
PKP1-205ENST00000477817 DNMT1P26358 1616 aaKnown RBP18.89■□□□□ 0.61
PKP1-205ENST00000477817 ATP7AQ04656 1500 aa18.88■□□□□ 0.61
PKP1-205ENST00000477817 ANKLE2Q86XL3 938 aa18.87■□□□□ 0.61
PKP1-205ENST00000477817 CCDC18Q5T9S5 1454 aa18.85■□□□□ 0.61
PKP1-205ENST00000477817 TNRQ92752 1358 aa18.82■□□□□ 0.6
PKP1-205ENST00000477817 THEMISQ8N1K5 641 aaPredicted RBP18.82■□□□□ 0.6
PKP1-205ENST00000477817 CFDP1Q9UEE9 299 aaPredicted RBP18.82■□□□□ 0.6
PKP1-205ENST00000477817 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.81■□□□□ 0.6
PKP1-205ENST00000477817 PLXNC1O60486 1568 aa18.8■□□□□ 0.6
PKP1-205ENST00000477817 NEURL4Q96JN8 1562 aa18.8■□□□□ 0.6
PKP1-205ENST00000477817 PLEKHH2Q8IVE3 1493 aa18.79■□□□□ 0.6
PKP1-205ENST00000477817 FBXO31Q5XUX0 539 aaPredicted RBP18.79■□□□□ 0.6
PKP1-205ENST00000477817 ADGBQ8N7X0 1667 aa18.79■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms