RNA–Protein interactions for RNA: ENST00000477546.5

TRAIP-206, Transcript of TRAF interacting protein, humanhuman

TSL 2

Gene TRAIP, Length 1,175 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIP-206ENST00000477546 UBAP1LF5GYI3 381 aa18.11■□□□□ 0.49
TRAIP-206ENST00000477546 MED1Q15648 1581 aaPredicted RBP18.1■□□□□ 0.49
TRAIP-206ENST00000477546 HECW1Q76N89 1606 aa18.09■□□□□ 0.49
TRAIP-206ENST00000477546 C9orf84Q5VXU9 1444 aa18.09■□□□□ 0.49
TRAIP-206ENST00000477546 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.09■□□□□ 0.49
TRAIP-206ENST00000477546 HNRNPUL2Q1KMD3 747 aaKnown RBP18.09■□□□□ 0.49
TRAIP-206ENST00000477546 ATP10AO60312 1499 aa18.08■□□□□ 0.49
TRAIP-206ENST00000477546 SETD1BQ9UPS6 1966 aaKnown RBP18.08■□□□□ 0.49
TRAIP-206ENST00000477546 NCOA1Q15788 1441 aa18.07■□□□□ 0.48
TRAIP-206ENST00000477546 RAPGEF6Q8TEU7 1601 aa18.04■□□□□ 0.48
TRAIP-206ENST00000477546 P3H3Q8IVL6 736 aa18.03■□□□□ 0.48
TRAIP-206ENST00000477546 NUP153P49790 1475 aaKnown RBP18.01■□□□□ 0.47
TRAIP-206ENST00000477546 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.01■□□□□ 0.47
TRAIP-206ENST00000477546 SCAPERQ9BY12 1400 aa18■□□□□ 0.47
TRAIP-206ENST00000477546 PLEKHD1A6NEE1 506 aa18■□□□□ 0.47
TRAIP-206ENST00000477546 ZNF335Q9H4Z2 1342 aaPredicted RBP17.99■□□□□ 0.47
TRAIP-206ENST00000477546 TRAPPC8Q9Y2L5 1435 aa17.98■□□□□ 0.47
TRAIP-206ENST00000477546 HSPA1LP34931 641 aa17.98■□□□□ 0.47
TRAIP-206ENST00000477546 PHF23Q9BUL5 403 aaPredicted RBP17.97■□□□□ 0.47
TRAIP-206ENST00000477546 C3P01024 1663 aa17.94■□□□□ 0.46
TRAIP-206ENST00000477546 PRXQ9BXM0 1461 aa17.94■□□□□ 0.46
TRAIP-206ENST00000477546 CAMSAP1Q5T5Y3 1602 aa17.93■□□□□ 0.46
TRAIP-206ENST00000477546 SAMD9Q5K651 1589 aa17.91■□□□□ 0.46
TRAIP-206ENST00000477546 PLCH2O75038 1416 aa17.91■□□□□ 0.46
TRAIP-206ENST00000477546 SCAF1Q9H7N4 1312 aaKnown RBP17.9■□□□□ 0.46
TRAIP-206ENST00000477546 ESF1Q9H501 851 aaKnown RBP17.89■□□□□ 0.45
TRAIP-206ENST00000477546 NCKAP5LQ9HCH0 1330 aa17.88■□□□□ 0.45
TRAIP-206ENST00000477546 ZNF518AQ6AHZ1 1483 aa17.88■□□□□ 0.45
TRAIP-206ENST00000477546 REREQ9P2R6 1566 aa17.87■□□□□ 0.45
TRAIP-206ENST00000477546 PIP4K2BP78356 416 aa17.87■□□□□ 0.45
TRAIP-206ENST00000477546 PKD2Q13563 968 aa17.86■□□□□ 0.45
TRAIP-206ENST00000477546 NPATQ14207 1427 aa17.86■□□□□ 0.45
TRAIP-206ENST00000477546 TOM1O60784 492 aa17.85■□□□□ 0.45
TRAIP-206ENST00000477546 AGLP35573 1532 aa17.85■□□□□ 0.45
TRAIP-206ENST00000477546 PLA2R1Q13018 1463 aa17.85■□□□□ 0.45
TRAIP-206ENST00000477546 CNTLNQ9NXG0 1405 aa17.85■□□□□ 0.45
TRAIP-206ENST00000477546 KDM5CP41229 1560 aa17.84■□□□□ 0.45
TRAIP-206ENST00000477546 DIP2CQ9Y2E4 1556 aa17.83■□□□□ 0.45
TRAIP-206ENST00000477546 EFCAB2Q5VUJ9 269 aa17.83■□□□□ 0.44
TRAIP-206ENST00000477546 TCOF1Q13428 1488 aaKnown RBP17.82■□□□□ 0.44
TRAIP-206ENST00000477546 AFAP1Q8N556 730 aa17.79■□□□□ 0.44
TRAIP-206ENST00000477546 PPP6R1Q9UPN7 881 aa17.79■□□□□ 0.44
TRAIP-206ENST00000477546 MYT1LQ9UL68 1186 aa17.77■□□□□ 0.44
TRAIP-206ENST00000477546 CPS1P31327 1500 aa17.76■□□□□ 0.43
TRAIP-206ENST00000477546 ABCA6Q8N139 1617 aa17.76■□□□□ 0.43
TRAIP-206ENST00000477546 MLH3Q9UHC1 1453 aa17.75■□□□□ 0.43
TRAIP-206ENST00000477546 ZNF142P52746 1687 aaPredicted RBP17.74■□□□□ 0.43
TRAIP-206ENST00000477546 ZMYM3Q14202 1370 aa17.73■□□□□ 0.43
TRAIP-206ENST00000477546 PTPRKQ15262 1439 aa17.72■□□□□ 0.43
TRAIP-206ENST00000477546 MROH2AA6NES4 1674 aa17.72■□□□□ 0.43
TRAIP-206ENST00000477546 RGS17Q9UGC6 210 aaPredicted RBP17.72■□□□□ 0.43
TRAIP-206ENST00000477546 MYO5CQ9NQX4 1742 aa17.72■□□□□ 0.43
TRAIP-206ENST00000477546 CDK13Q14004 1512 aaKnown RBP17.72■□□□□ 0.43
TRAIP-206ENST00000477546 CEP170BQ9Y4F5 1589 aaPredicted RBP17.7■□□□□ 0.42
TRAIP-206ENST00000477546 MYO3AQ8NEV4 1616 aa17.7■□□□□ 0.42
TRAIP-206ENST00000477546 ARHGAP5Q13017 1502 aa17.68■□□□□ 0.42
TRAIP-206ENST00000477546 ALKQ9UM73 1620 aa17.68■□□□□ 0.42
TRAIP-206ENST00000477546 SHANK2Q9UPX8 1470 aa17.68■□□□□ 0.42
TRAIP-206ENST00000477546 SUPT6HQ7KZ85 1726 aaKnown RBP17.64■□□□□ 0.41
TRAIP-206ENST00000477546 RANGAP1P46060 587 aaPredicted RBP17.63■□□□□ 0.41
TRAIP-206ENST00000477546 KIF14Q15058 1648 aa17.6■□□□□ 0.41
TRAIP-206ENST00000477546 A2ML1A8K2U0 1454 aa17.59■□□□□ 0.41
TRAIP-206ENST00000477546 CDK11AQ9UQ88 783 aaPredicted RBP17.59■□□□□ 0.41
TRAIP-206ENST00000477546 KIDINS220Q9ULH0 1771 aa17.58■□□□□ 0.41
TRAIP-206ENST00000477546 NEURL4Q96JN8 1562 aa17.58■□□□□ 0.41
TRAIP-206ENST00000477546 ABCC1P33527 1531 aa17.58■□□□□ 0.41
TRAIP-206ENST00000477546 SENP3Q9H4L4 574 aaPredicted RBP17.58■□□□□ 0.4
TRAIP-206ENST00000477546 POTEAQ6S8J7 498 aa17.57■□□□□ 0.4
TRAIP-206ENST00000477546 VWDEQ8N2E2 1590 aa17.57■□□□□ 0.4
TRAIP-206ENST00000477546 DNMT1P26358 1616 aaKnown RBP17.56■□□□□ 0.4
TRAIP-206ENST00000477546 TROQ12816 1431 aaPredicted RBP17.55■□□□□ 0.4
TRAIP-206ENST00000477546 CLTCQ00610 1675 aaKnown RBP17.54■□□□□ 0.4
TRAIP-206ENST00000477546 POLR1AO95602 1720 aaPredicted RBP17.53■□□□□ 0.4
TRAIP-206ENST00000477546 CLIP1P30622 1438 aa17.53■□□□□ 0.4
TRAIP-206ENST00000477546 CSRNP3Q8WYN3 585 aa17.52■□□□□ 0.4
TRAIP-206ENST00000477546 ITSN2Q9NZM3 1697 aa17.52■□□□□ 0.39
TRAIP-206ENST00000477546 RNF17Q9BXT8 1623 aaKnown RBP17.5■□□□□ 0.39
TRAIP-206ENST00000477546 CDC42BPBQ9Y5S2 1711 aa17.5■□□□□ 0.39
TRAIP-206ENST00000477546 ANKLE2Q86XL3 938 aa17.48■□□□□ 0.39
TRAIP-206ENST00000477546 ATP1B4Q9UN42 357 aaPredicted RBP17.48■□□□□ 0.39
TRAIP-206ENST00000477546 SAMD9LQ8IVG5 1584 aa17.48■□□□□ 0.39
TRAIP-206ENST00000477546 LRRC7Q96NW7 1537 aa17.47■□□□□ 0.39
TRAIP-206ENST00000477546 PREX2Q70Z35 1606 aa17.47■□□□□ 0.39
TRAIP-206ENST00000477546 PLXNC1O60486 1568 aa17.47■□□□□ 0.39
TRAIP-206ENST00000477546 MED14O60244 1454 aa17.46■□□□□ 0.39
TRAIP-206ENST00000477546 NPHP4O75161 1426 aaPredicted RBP17.46■□□□□ 0.39
TRAIP-206ENST00000477546 FMN1Q68DA7 1419 aa17.46■□□□□ 0.39
TRAIP-206ENST00000477546 SYNMO15061 1565 aa17.45■□□□□ 0.38
TRAIP-206ENST00000477546 SETD1AO15047 1707 aaKnown RBP17.44■□□□□ 0.38
TRAIP-206ENST00000477546 GGT6Q6P531 493 aa17.44■□□□□ 0.38
TRAIP-206ENST00000477546 SPAG9O60271 1321 aaKnown RBP17.44■□□□□ 0.38
TRAIP-206ENST00000477546 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.43■□□□□ 0.38
TRAIP-206ENST00000477546 A2MP01023 1474 aa17.43■□□□□ 0.38
TRAIP-206ENST00000477546 TNRQ92752 1358 aa17.42■□□□□ 0.38
TRAIP-206ENST00000477546 DEPDC5O75140 1603 aa17.42■□□□□ 0.38
TRAIP-206ENST00000477546 THEMISQ8N1K5 641 aaPredicted RBP17.4■□□□□ 0.38
TRAIP-206ENST00000477546 UPF1Q92900 1129 aaKnown RBP eCLIP17.4■□□□□ 0.38
TRAIP-206ENST00000477546 ATP7AQ04656 1500 aa17.4■□□□□ 0.38
TRAIP-206ENST00000477546 STRCP1A6NGW2 1772 aa17.38■□□□□ 0.37
TRAIP-206ENST00000477546 IQGAP1P46940 1657 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms