RNA–Protein interactions for RNA: ENST00000477126.1

TMEM42-202, Transcript of transmembrane protein 42, humanhuman

TSL 1 (best)

Gene TMEM42, Length 3,071 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM42-202ENST00000477126 DDRGK1Q96HY6 314 aa28.83■■■□□ 2.21
TMEM42-202ENST00000477126 CRBNQ96SW2 442 aa28.83■■■□□ 2.21
TMEM42-202ENST00000477126 MPHOSPH9Q99550 1183 aa28.83■■■□□ 2.21
TMEM42-202ENST00000477126 NAP1L5Q96NT1 182 aaPredicted RBP28.83■■■□□ 2.21
TMEM42-202ENST00000477126 RSPH6AQ9H0K4 717 aa28.83■■■□□ 2.21
TMEM42-202ENST00000477126 RNF123Q5XPI4 1314 aa28.82■■■□□ 2.2
TMEM42-202ENST00000477126 CUX1P39880 1505 aa28.81■■■□□ 2.2
TMEM42-202ENST00000477126 PNISRQ8TF01 805 aaKnown RBP28.8■■■□□ 2.2
TMEM42-202ENST00000477126 BIVM-ERCC5R4GMW8 1640 aa28.8■■■□□ 2.2
TMEM42-202ENST00000477126 POGKQ9P215 609 aa28.79■■■□□ 2.2
TMEM42-202ENST00000477126 CARMIL1Q5VZK9 1371 aa28.78■■■□□ 2.2
TMEM42-202ENST00000477126 NCOA1Q15788 1441 aa28.77■■■□□ 2.2
TMEM42-202ENST00000477126 FGD6Q6ZV73 1430 aa28.77■■■□□ 2.2
TMEM42-202ENST00000477126 SLKQ9H2G2 1235 aaPredicted RBP28.76■■■□□ 2.2
TMEM42-202ENST00000477126 ZMYND15Q9H091 742 aa28.76■■■□□ 2.19
TMEM42-202ENST00000477126 RRAGDQ9NQL2 400 aaPredicted RBP28.76■■■□□ 2.19
TMEM42-202ENST00000477126 IGF1RP08069 1367 aa28.75■■■□□ 2.19
TMEM42-202ENST00000477126 C20orf194Q5TEA3 1177 aa28.75■■■□□ 2.19
TMEM42-202ENST00000477126 NAIPQ13075 1403 aa28.74■■■□□ 2.19
TMEM42-202ENST00000477126 NCAPD3P42695 1498 aa28.74■■■□□ 2.19
TMEM42-202ENST00000477126 NCOA2Q15596 1464 aa28.74■■■□□ 2.19
TMEM42-202ENST00000477126 KDM5BQ9UGL1 1544 aa28.73■■■□□ 2.19
TMEM42-202ENST00000477126 FMN1Q68DA7 1419 aa28.7■■■□□ 2.19
TMEM42-202ENST00000477126 GZF1Q9H116 711 aaPredicted RBP28.7■■■□□ 2.19
TMEM42-202ENST00000477126 FAM43AQ8N2R8 423 aa28.69■■■□□ 2.18
TMEM42-202ENST00000477126 SPRYD3Q8NCJ5 442 aa28.69■■■□□ 2.18
TMEM42-202ENST00000477126 PCF11O94913 1555 aaKnown RBP28.68■■■□□ 2.18
TMEM42-202ENST00000477126 MS4A1P11836 297 aa28.68■■■□□ 2.18
TMEM42-202ENST00000477126 HFM1A2PYH4 1435 aa28.68■■■□□ 2.18
TMEM42-202ENST00000477126 HMGXB3Q12766 1538 aa28.67■■■□□ 2.18
TMEM42-202ENST00000477126 SLC4A1APQ9BWU0 796 aaKnown RBP28.66■■■□□ 2.18
TMEM42-202ENST00000477126 KDM2AQ9Y2K7 1162 aa28.66■■■□□ 2.18
TMEM42-202ENST00000477126 GLIPR1L2Q4G1C9 344 aa28.61■■■□□ 2.17
TMEM42-202ENST00000477126 PTPN23Q9H3S7 1636 aa28.59■■■□□ 2.17
TMEM42-202ENST00000477126 CFTRP13569 1480 aa28.59■■■□□ 2.17
TMEM42-202ENST00000477126 MAP3K1Q13233 1512 aa28.58■■■□□ 2.17
TMEM42-202ENST00000477126 DHX29Q7Z478 1369 aaKnown RBP28.57■■■□□ 2.16
TMEM42-202ENST00000477126 CC2D1BQ5T0F9 858 aaKnown RBP28.54■■■□□ 2.16
TMEM42-202ENST00000477126 HSP90AA2PQ14568 343 aaPredicted RBP28.54■■■□□ 2.16
TMEM42-202ENST00000477126 PANK2Q9BZ23 570 aa28.5■■■□□ 2.15
TMEM42-202ENST00000477126 PNNQ9H307 717 aaKnown RBP28.49■■■□□ 2.15
TMEM42-202ENST00000477126 USP47Q96K76 1375 aa28.47■■■□□ 2.15
TMEM42-202ENST00000477126 FAM161AQ3B820 660 aa28.47■■■□□ 2.15
TMEM42-202ENST00000477126 C8orf34Q49A92 452 aa28.46■■■□□ 2.15
TMEM42-202ENST00000477126 PLEKHG5O94827 1062 aa28.46■■■□□ 2.15
TMEM42-202ENST00000477126 DENND4BO75064 1496 aaPredicted RBP28.45■■■□□ 2.15
TMEM42-202ENST00000477126 CARD11Q9BXL7 1154 aa28.45■■■□□ 2.14
TMEM42-202ENST00000477126 HSP90AA1P07900 732 aaKnown RBP28.44■■■□□ 2.14
TMEM42-202ENST00000477126 ST20-MTHFSA0A0A6YYL1 179 aa28.43■■■□□ 2.14
TMEM42-202ENST00000477126 SEC24BO95487 1268 aa28.38■■■□□ 2.13
TMEM42-202ENST00000477126 ARID3AQ99856 593 aa28.38■■■□□ 2.13
TMEM42-202ENST00000477126 KDM6BO15054 1643 aa28.38■■■□□ 2.13
TMEM42-202ENST00000477126 MYBBP1AQ9BQG0 1328 aaKnown RBP28.36■■■□□ 2.13
TMEM42-202ENST00000477126 MYOM3Q5VTT5 1437 aa28.35■■■□□ 2.13
TMEM42-202ENST00000477126 ZNF644Q9H582 1327 aaPredicted RBP28.34■■■□□ 2.13
TMEM42-202ENST00000477126 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP28.33■■■□□ 2.13
TMEM42-202ENST00000477126 SPATA31E1Q6ZUB1 1445 aa28.32■■■□□ 2.12
TMEM42-202ENST00000477126 CASKIN1Q8WXD9 1431 aa28.31■■■□□ 2.12
TMEM42-202ENST00000477126 CADPSQ9ULU8 1353 aa28.31■■■□□ 2.12
TMEM42-202ENST00000477126 XRCC6P12956 609 aaKnown RBP eCLIP28.3■■■□□ 2.12
TMEM42-202ENST00000477126 FGD5Q6ZNL6 1462 aa28.3■■■□□ 2.12
TMEM42-202ENST00000477126 ZNF777Q9ULD5 760 aaPredicted RBP28.28■■■□□ 2.12
TMEM42-202ENST00000477126 CFAP43Q8NDM7 1665 aa28.28■■■□□ 2.12
TMEM42-202ENST00000477126 KTN1Q86UP2 1357 aaKnown RBP28.28■■■□□ 2.12
TMEM42-202ENST00000477126 ANKRD30BQ9BXX2 1392 aa28.27■■■□□ 2.12
TMEM42-202ENST00000477126 CENPQQ7L2Z9 268 aaPredicted RBP28.27■■■□□ 2.12
TMEM42-202ENST00000477126 KIF15Q9NS87 1388 aa28.25■■■□□ 2.11
TMEM42-202ENST00000477126 FYCO1Q9BQS8 1478 aa28.25■■■□□ 2.11
TMEM42-202ENST00000477126 A0A0U1RQG5 324 aaPredicted RBP28.25■■■□□ 2.11
TMEM42-202ENST00000477126 GOLGA6L3A6NEY3 463 aa28.25■■■□□ 2.11
TMEM42-202ENST00000477126 L1TD1Q5T7N2 865 aaKnown RBP28.23■■■□□ 2.11
TMEM42-202ENST00000477126 PODXL2Q9NZ53 605 aa28.23■■■□□ 2.11
TMEM42-202ENST00000477126 NLRP13Q86W25 1043 aa28.23■■■□□ 2.11
TMEM42-202ENST00000477126 PKD2Q13563 968 aa28.22■■■□□ 2.11
TMEM42-202ENST00000477126 PRDM2Q13029 1718 aa28.2■■■□□ 2.11
TMEM42-202ENST00000477126 KDM2BQ8NHM5 1336 aa28.2■■■□□ 2.1
TMEM42-202ENST00000477126 LRPPRCP42704 1394 aaKnown RBP28.19■■■□□ 2.1
TMEM42-202ENST00000477126 RALBP1Q15311 655 aa28.19■■■□□ 2.1
TMEM42-202ENST00000477126 CC2D2AQ9P2K1 1620 aa28.18■■■□□ 2.1
TMEM42-202ENST00000477126 PDE3BQ13370 1112 aa28.18■■■□□ 2.1
TMEM42-202ENST00000477126 BRD4O60885 1362 aaPredicted RBP28.17■■■□□ 2.1
TMEM42-202ENST00000477126 CCDC146Q8IYE0 955 aa28.17■■■□□ 2.1
TMEM42-202ENST00000477126 RGL3Q3MIN7 710 aa28.17■■■□□ 2.1
TMEM42-202ENST00000477126 ADAMTS8Q9UP79 889 aa28.16■■■□□ 2.1
TMEM42-202ENST00000477126 RAD54L2Q9Y4B4 1467 aa28.15■■■□□ 2.1
TMEM42-202ENST00000477126 BCAR3O75815 825 aa28.15■■■□□ 2.1
TMEM42-202ENST00000477126 BECN1Q14457 450 aa28.15■■■□□ 2.1
TMEM42-202ENST00000477126 RPRD2Q5VT52 1461 aaKnown RBP28.14■■■□□ 2.1
TMEM42-202ENST00000477126 IGHDP01880 384 aa28.14■■■□□ 2.1
TMEM42-202ENST00000477126 BCORL1Q5H9F3 1711 aa28.14■■■□□ 2.1
TMEM42-202ENST00000477126 NESP48681 1621 aa28.12■■■□□ 2.09
TMEM42-202ENST00000477126 TEX14Q8IWB6 1497 aa28.12■■■□□ 2.09
TMEM42-202ENST00000477126 RBM10P98175 930 aaKnown RBP28.11■■■□□ 2.09
TMEM42-202ENST00000477126 CANXP27824 592 aaKnown RBP28.1■■■□□ 2.09
TMEM42-202ENST00000477126 FANCD2Q9BXW9 1451 aa28.09■■■□□ 2.09
TMEM42-202ENST00000477126 RRP9O43818 475 aaKnown RBP28.09■■■□□ 2.09
TMEM42-202ENST00000477126 USP19O94966 1318 aa28.06■■■□□ 2.08
TMEM42-202ENST00000477126 ERBB4Q15303 1308 aa28.05■■■□□ 2.08
TMEM42-202ENST00000477126 CLCN1P35523 988 aa28.04■■■□□ 2.08
TMEM42-202ENST00000477126 COG6Q9Y2V7 657 aa28.04■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms