RNA–Protein interactions for RNA: ENST00000475818.5

HDAC11-217, Transcript of histone deacetylase 11, humanhuman

TSL 3

Gene HDAC11, Length 1,271 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC11-217ENST00000475818 HECW1Q76N89 1606 aa34.37■■■■□ 3.09
HDAC11-217ENST00000475818 SCAPERQ9BY12 1400 aa34.31■■■■□ 3.08
HDAC11-217ENST00000475818 CEBPAP49715 358 aaPredicted RBP34.3■■■■□ 3.08
HDAC11-217ENST00000475818 ARHGEF12Q9NZN5 1544 aa34.27■■■■□ 3.08
HDAC11-217ENST00000475818 SOCS7O14512 581 aa34.26■■■■□ 3.08
HDAC11-217ENST00000475818 ATP10AO60312 1499 aa34.24■■■■□ 3.07
HDAC11-217ENST00000475818 PREX1Q8TCU6 1659 aa34.24■■■■□ 3.07
HDAC11-217ENST00000475818 CDK13Q14004 1512 aaKnown RBP34.24■■■■□ 3.07
HDAC11-217ENST00000475818 C9orf84Q5VXU9 1444 aa34.22■■■■□ 3.07
HDAC11-217ENST00000475818 PLCH2O75038 1416 aa34.21■■■■□ 3.07
HDAC11-217ENST00000475818 DMRT2Q9Y5R5 561 aa34.18■■■■□ 3.06
HDAC11-217ENST00000475818 STRCQ7RTU9 1775 aa34.14■■■■□ 3.06
HDAC11-217ENST00000475818 UHRF1BP1Q6BDS2 1440 aa34.13■■■■□ 3.05
HDAC11-217ENST00000475818 EFCAB2Q5VUJ9 269 aa34.11■■■■□ 3.05
HDAC11-217ENST00000475818 ATP1B4Q9UN42 357 aaPredicted RBP34.08■■■■□ 3.05
HDAC11-217ENST00000475818 SPATA31D1Q6ZQQ2 1576 aa34.06■■■■□ 3.04
HDAC11-217ENST00000475818 MYT1LQ9UL68 1186 aa34.05■■■■□ 3.04
HDAC11-217ENST00000475818 EEA1Q15075 1411 aa34.03■■■■□ 3.04
HDAC11-217ENST00000475818 AFAP1Q8N556 730 aa34.02■■■■□ 3.04
HDAC11-217ENST00000475818 MYO5CQ9NQX4 1742 aa34.01■■■■□ 3.04
HDAC11-217ENST00000475818 ZNF518AQ6AHZ1 1483 aa34.01■■■■□ 3.04
HDAC11-217ENST00000475818 PTPRTO14522 1441 aa33.98■■■■□ 3.03
HDAC11-217ENST00000475818 KIF14Q15058 1648 aa33.96■■■■□ 3.03
HDAC11-217ENST00000475818 ARHGAP5Q13017 1502 aa33.94■■■■□ 3.02
HDAC11-217ENST00000475818 KDM5CP41229 1560 aa33.94■■■■□ 3.02
HDAC11-217ENST00000475818 DIP2CQ9Y2E4 1556 aa33.94■■■■□ 3.02
HDAC11-217ENST00000475818 CDK11AQ9UQ88 783 aaPredicted RBP33.91■■■■□ 3.02
HDAC11-217ENST00000475818 SETD1BQ9UPS6 1966 aaKnown RBP33.9■■■■□ 3.02
HDAC11-217ENST00000475818 C3P01024 1663 aa33.9■■■■□ 3.02
HDAC11-217ENST00000475818 LTBP4Q8N2S1 1624 aa33.9■■■■□ 3.02
HDAC11-217ENST00000475818 ESF1Q9H501 851 aaKnown RBP33.89■■■■□ 3.02
HDAC11-217ENST00000475818 EHMT2Q96KQ7 1210 aa33.88■■■■□ 3.01
HDAC11-217ENST00000475818 ABCA6Q8N139 1617 aa33.86■■■■□ 3.01
HDAC11-217ENST00000475818 TROQ12816 1431 aaPredicted RBP33.85■■■■□ 3.01
HDAC11-217ENST00000475818 FMN1Q68DA7 1419 aa33.85■■■■□ 3.01
HDAC11-217ENST00000475818 REREQ9P2R6 1566 aa33.85■■■■□ 3.01
HDAC11-217ENST00000475818 TRAPPC8Q9Y2L5 1435 aa33.83■■■■□ 3.01
HDAC11-217ENST00000475818 NCOA1Q15788 1441 aa33.81■■■■□ 3
HDAC11-217ENST00000475818 MLH3Q9UHC1 1453 aa33.8■■■■□ 3
HDAC11-217ENST00000475818 CLIP1P30622 1438 aa33.79■■■■□ 3
HDAC11-217ENST00000475818 IQSEC2Q5JU85 1478 aa33.78■■■■□ 3
HDAC11-217ENST00000475818 AGLP35573 1532 aa33.77■■■■□ 3
HDAC11-217ENST00000475818 UBTFP17480 764 aaKnown RBP33.75■■■□□ 2.99
HDAC11-217ENST00000475818 ARHGAP35Q9NRY4 1499 aa33.75■■■□□ 2.99
HDAC11-217ENST00000475818 CDC42BPBQ9Y5S2 1711 aa33.7■■■□□ 2.98
HDAC11-217ENST00000475818 CNTLNQ9NXG0 1405 aa33.7■■■□□ 2.98
HDAC11-217ENST00000475818 ABCC1P33527 1531 aa33.69■■■□□ 2.98
HDAC11-217ENST00000475818 CAMSAP1Q5T5Y3 1602 aa33.69■■■□□ 2.98
HDAC11-217ENST00000475818 NCKAP5LQ9HCH0 1330 aa33.67■■■□□ 2.98
HDAC11-217ENST00000475818 UBAP1LF5GYI3 381 aa33.66■■■□□ 2.98
HDAC11-217ENST00000475818 ZNF335Q9H4Z2 1342 aaPredicted RBP33.66■■■□□ 2.98
HDAC11-217ENST00000475818 ITSN2Q9NZM3 1697 aa33.64■■■□□ 2.98
HDAC11-217ENST00000475818 PREX2Q70Z35 1606 aa33.64■■■□□ 2.98
HDAC11-217ENST00000475818 LRRIQ1Q96JM4 1722 aa33.63■■■□□ 2.97
HDAC11-217ENST00000475818 KIDINS220Q9ULH0 1771 aa33.62■■■□□ 2.97
HDAC11-217ENST00000475818 NPATQ14207 1427 aa33.61■■■□□ 2.97
HDAC11-217ENST00000475818 ZMYM3Q14202 1370 aa33.58■■■□□ 2.97
HDAC11-217ENST00000475818 MROH2AA6NES4 1674 aa33.53■■■□□ 2.96
HDAC11-217ENST00000475818 ZNF777Q9ULD5 760 aaPredicted RBP33.53■■■□□ 2.96
HDAC11-217ENST00000475818 SAMD9LQ8IVG5 1584 aa33.51■■■□□ 2.95
HDAC11-217ENST00000475818 PKD2Q13563 968 aa33.47■■■□□ 2.95
HDAC11-217ENST00000475818 SPAG9O60271 1321 aaKnown RBP33.47■■■□□ 2.95
HDAC11-217ENST00000475818 SUPT6HQ7KZ85 1726 aaKnown RBP33.45■■■□□ 2.95
HDAC11-217ENST00000475818 MYO3AQ8NEV4 1616 aa33.45■■■□□ 2.95
HDAC11-217ENST00000475818 CDC42BPAQ5VT25 1732 aa33.45■■■□□ 2.94
HDAC11-217ENST00000475818 PLA2R1Q13018 1463 aa33.44■■■□□ 2.94
HDAC11-217ENST00000475818 CCDC18Q5T9S5 1454 aa33.44■■■□□ 2.94
HDAC11-217ENST00000475818 SYCP2Q9BX26 1530 aa33.43■■■□□ 2.94
HDAC11-217ENST00000475818 CLTCQ00610 1675 aaKnown RBP33.43■■■□□ 2.94
HDAC11-217ENST00000475818 HNRNPMP52272 730 aaKnown RBP eCLIP33.42■■■□□ 2.94
HDAC11-217ENST00000475818 TCOF1Q13428 1488 aaKnown RBP33.42■■■□□ 2.94
HDAC11-217ENST00000475818 CEP170BQ9Y4F5 1589 aaPredicted RBP33.42■■■□□ 2.94
HDAC11-217ENST00000475818 SCAF1Q9H7N4 1312 aaKnown RBP33.41■■■□□ 2.94
HDAC11-217ENST00000475818 CASKIN1Q8WXD9 1431 aa33.41■■■□□ 2.94
HDAC11-217ENST00000475818 ZNF142P52746 1687 aaPredicted RBP33.41■■■□□ 2.94
HDAC11-217ENST00000475818 PTPRKQ15262 1439 aa33.4■■■□□ 2.94
HDAC11-217ENST00000475818 PPP6R1Q9UPN7 881 aa33.4■■■□□ 2.94
HDAC11-217ENST00000475818 GGT6Q6P531 493 aa33.37■■■□□ 2.93
HDAC11-217ENST00000475818 HSPA1LP34931 641 aa33.36■■■□□ 2.93
HDAC11-217ENST00000475818 ATP7AQ04656 1500 aa33.35■■■□□ 2.93
HDAC11-217ENST00000475818 PIP4K2BP78356 416 aa33.35■■■□□ 2.93
HDAC11-217ENST00000475818 A2MP01023 1474 aa33.34■■■□□ 2.93
HDAC11-217ENST00000475818 PLXNC1O60486 1568 aa33.32■■■□□ 2.92
HDAC11-217ENST00000475818 MED1Q15648 1581 aaPredicted RBP33.32■■■□□ 2.92
HDAC11-217ENST00000475818 GPATCH8Q9UKJ3 1502 aaKnown RBP33.32■■■□□ 2.92
HDAC11-217ENST00000475818 INO80Q9ULG1 1556 aaPredicted RBP33.28■■■□□ 2.92
HDAC11-217ENST00000475818 CFDP1Q9UEE9 299 aaPredicted RBP33.24■■■□□ 2.91
HDAC11-217ENST00000475818 A2ML1A8K2U0 1454 aa33.24■■■□□ 2.91
HDAC11-217ENST00000475818 KIAA1107Q9UPP5 1409 aa33.23■■■□□ 2.91
HDAC11-217ENST00000475818 TOM1O60784 492 aa33.22■■■□□ 2.91
HDAC11-217ENST00000475818 PLEKHH2Q8IVE3 1493 aa33.21■■■□□ 2.91
HDAC11-217ENST00000475818 FYCO1Q9BQS8 1478 aa33.21■■■□□ 2.91
HDAC11-217ENST00000475818 DNMT1P26358 1616 aaKnown RBP33.2■■■□□ 2.91
HDAC11-217ENST00000475818 CPS1P31327 1500 aa33.17■■■□□ 2.9
HDAC11-217ENST00000475818 CCNB3Q8WWL7 1395 aa33.16■■■□□ 2.9
HDAC11-217ENST00000475818 SHANK2Q9UPX8 1470 aa33.15■■■□□ 2.9
HDAC11-217ENST00000475818 PHF23Q9BUL5 403 aaPredicted RBP33.14■■■□□ 2.9
HDAC11-217ENST00000475818 NEURL4Q96JN8 1562 aa33.13■■■□□ 2.89
HDAC11-217ENST00000475818 FBXO31Q5XUX0 539 aaPredicted RBP33.12■■■□□ 2.89
HDAC11-217ENST00000475818 TNRQ92752 1358 aa33.11■■■□□ 2.89
Retrieved 100 of 20,778 RNA–protein pairs in 81.7 ms