RNA–Protein interactions for RNA: ENST00000473515.5

SCML4-209, Transcript of Scm polycomb group protein like 4, humanhuman

TSL 2

Gene SCML4, Length 4,297 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCML4-209ENST00000473515 TNNT2P45379 298 aaPredicted RBP12.47□□□□□ -0.41
SCML4-209ENST00000473515 LRRC9Q6ZRR7 1453 aa12.47□□□□□ -0.41
SCML4-209ENST00000473515 NEUROD2Q15784 382 aa12.46□□□□□ -0.42
SCML4-209ENST00000473515 POLA1P09884 1462 aaPredicted RBP12.45□□□□□ -0.42
SCML4-209ENST00000473515 FGD6Q6ZV73 1430 aa12.45□□□□□ -0.42
SCML4-209ENST00000473515 CDCA8Q53HL2 280 aa12.45□□□□□ -0.42
SCML4-209ENST00000473515 MAP3K1Q13233 1512 aa12.45□□□□□ -0.42
SCML4-209ENST00000473515 TOPBP1Q92547 1522 aa12.45□□□□□ -0.42
SCML4-209ENST00000473515 ARID4BQ4LE39 1312 aaPredicted RBP12.44□□□□□ -0.42
SCML4-209ENST00000473515 PLEKHG5O94827 1062 aa12.44□□□□□ -0.42
SCML4-209ENST00000473515 MLECQ14165 292 aa12.43□□□□□ -0.42
SCML4-209ENST00000473515 TMF1P82094 1093 aa12.42□□□□□ -0.42
SCML4-209ENST00000473515 SAFB2Q14151 953 aaKnown RBP eCLIP12.42□□□□□ -0.42
SCML4-209ENST00000473515 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.42□□□□□ -0.42
SCML4-209ENST00000473515 PTPRGP23470 1445 aa12.42□□□□□ -0.42
SCML4-209ENST00000473515 KIF3BO15066 747 aa12.42□□□□□ -0.42
SCML4-209ENST00000473515 PPM1GO15355 546 aaPredicted RBP12.42□□□□□ -0.42
SCML4-209ENST00000473515 MYOM3Q5VTT5 1437 aa12.4□□□□□ -0.42
SCML4-209ENST00000473515 ROCK2O75116 1388 aaKnown RBP12.4□□□□□ -0.42
SCML4-209ENST00000473515 CASKIN1Q8WXD9 1431 aa12.4□□□□□ -0.42
SCML4-209ENST00000473515 KANK1Q14678 1352 aa12.39□□□□□ -0.43
SCML4-209ENST00000473515 ERICH6BQ5W0A0 696 aa12.39□□□□□ -0.43
SCML4-209ENST00000473515 POGKQ9P215 609 aa12.38□□□□□ -0.43
SCML4-209ENST00000473515 NOP58Q9Y2X3 529 aaKnown RBP12.38□□□□□ -0.43
SCML4-209ENST00000473515 SPAG9O60271 1321 aaKnown RBP12.38□□□□□ -0.43
SCML4-209ENST00000473515 NCOA2Q15596 1464 aa12.38□□□□□ -0.43
SCML4-209ENST00000473515 FANCIQ9NVI1 1328 aa12.38□□□□□ -0.43
SCML4-209ENST00000473515 ST20-MTHFSA0A0A6YYL1 179 aa12.36□□□□□ -0.43
SCML4-209ENST00000473515 GRIN2BQ13224 1484 aa12.35□□□□□ -0.43
SCML4-209ENST00000473515 STK26Q9P289 416 aa12.35□□□□□ -0.43
SCML4-209ENST00000473515 LAS1LQ9Y4W2 734 aaKnown RBP12.35□□□□□ -0.43
SCML4-209ENST00000473515 CFAP53Q96M91 514 aa12.34□□□□□ -0.43
SCML4-209ENST00000473515 RSPH4AQ5TD94 716 aa12.34□□□□□ -0.43
SCML4-209ENST00000473515 PRDM2Q13029 1718 aa12.34□□□□□ -0.43
SCML4-209ENST00000473515 NUTM2DQ5VT03 806 aaPredicted RBP12.34□□□□□ -0.43
SCML4-209ENST00000473515 C14orf37Q86TY3 774 aa12.34□□□□□ -0.43
SCML4-209ENST00000473515 FYCO1Q9BQS8 1478 aa12.33□□□□□ -0.44
SCML4-209ENST00000473515 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.32□□□□□ -0.44
SCML4-209ENST00000473515 ZBTB7CA1YPR0 619 aa12.32□□□□□ -0.44
SCML4-209ENST00000473515 UACAQ9BZF9 1416 aa12.32□□□□□ -0.44
SCML4-209ENST00000473515 EIF5BO60841 1220 aaKnown RBP12.31□□□□□ -0.44
SCML4-209ENST00000473515 PRKRIP1Q9H875 184 aaPredicted RBP12.31□□□□□ -0.44
SCML4-209ENST00000473515 PCF11O94913 1555 aaKnown RBP12.31□□□□□ -0.44
SCML4-209ENST00000473515 DNMBPQ6XZF7 1577 aa12.31□□□□□ -0.44
SCML4-209ENST00000473515 U2SURPO15042 1029 aaKnown RBP12.31□□□□□ -0.44
SCML4-209ENST00000473515 SRPK2P78362 688 aaKnown RBP12.31□□□□□ -0.44
SCML4-209ENST00000473515 DEKP35659 375 aaKnown RBP12.31□□□□□ -0.44
SCML4-209ENST00000473515 KTN1Q86UP2 1357 aaKnown RBP12.3□□□□□ -0.44
SCML4-209ENST00000473515 FRAT1Q92837 279 aaPredicted RBP12.29□□□□□ -0.44
SCML4-209ENST00000473515 ARXQ96QS3 562 aa12.29□□□□□ -0.44
SCML4-209ENST00000473515 UPF2Q9HAU5 1272 aaKnown RBP12.29□□□□□ -0.44
SCML4-209ENST00000473515 MRC2Q9UBG0 1479 aa12.29□□□□□ -0.44
SCML4-209ENST00000473515 CCDC144AA2RUR9 1427 aa12.28□□□□□ -0.44
SCML4-209ENST00000473515 CFAP43Q8NDM7 1665 aa12.28□□□□□ -0.44
SCML4-209ENST00000473515 MSH5O43196 834 aa12.28□□□□□ -0.44
SCML4-209ENST00000473515 ABCA10Q8WWZ4 1543 aa12.27□□□□□ -0.45
SCML4-209ENST00000473515 MORC1Q86VD1 984 aa12.27□□□□□ -0.45
SCML4-209ENST00000473515 RTN4Q9NQC3 1192 aaKnown RBP12.27□□□□□ -0.45
SCML4-209ENST00000473515 USP47Q96K76 1375 aa12.27□□□□□ -0.45
SCML4-209ENST00000473515 EFCAB5A4FU69 1503 aa12.26□□□□□ -0.45
SCML4-209ENST00000473515 KIF15Q9NS87 1388 aa12.26□□□□□ -0.45
SCML4-209ENST00000473515 SOX12O15370 315 aa12.26□□□□□ -0.45
SCML4-209ENST00000473515 RGS3P49796 1198 aa12.26□□□□□ -0.45
SCML4-209ENST00000473515 NUDCQ9Y266 331 aa12.26□□□□□ -0.45
SCML4-209ENST00000473515 WASHC2CQ9Y4E1 1318 aa12.26□□□□□ -0.45
SCML4-209ENST00000473515 HFM1A2PYH4 1435 aa12.26□□□□□ -0.45
SCML4-209ENST00000473515 PRG4Q92954 1404 aaPredicted RBP12.25□□□□□ -0.45
SCML4-209ENST00000473515 MAPK8IP3Q9UPT6 1336 aa12.25□□□□□ -0.45
SCML4-209ENST00000473515 WASHC2AQ641Q2 1341 aa12.25□□□□□ -0.45
SCML4-209ENST00000473515 HSP90AA1P07900 732 aaKnown RBP12.25□□□□□ -0.45
SCML4-209ENST00000473515 CYB5RLQ6IPT4 315 aa12.25□□□□□ -0.45
SCML4-209ENST00000473515 SNAPC4Q5SXM2 1469 aa12.24□□□□□ -0.45
SCML4-209ENST00000473515 RALBP1Q15311 655 aa12.24□□□□□ -0.45
SCML4-209ENST00000473515 ANKRD50Q9ULJ7 1429 aa12.24□□□□□ -0.45
SCML4-209ENST00000473515 TRAK1Q9UPV9 953 aa12.24□□□□□ -0.45
SCML4-209ENST00000473515 TRHP20396 242 aaPredicted RBP12.24□□□□□ -0.45
SCML4-209ENST00000473515 AFAP1Q8N556 730 aa12.23□□□□□ -0.45
SCML4-209ENST00000473515 IFT140Q96RY7 1462 aa12.23□□□□□ -0.45
SCML4-209ENST00000473515 PANK3Q9H999 370 aa12.22□□□□□ -0.45
SCML4-209ENST00000473515 RCAN3Q9UKA8 241 aa12.22□□□□□ -0.45
SCML4-209ENST00000473515 NLRP13Q86W25 1043 aa12.22□□□□□ -0.45
SCML4-209ENST00000473515 DDRGK1Q96HY6 314 aa12.22□□□□□ -0.45
SCML4-209ENST00000473515 CDK13Q14004 1512 aaKnown RBP12.22□□□□□ -0.45
SCML4-209ENST00000473515 CNTLNQ9NXG0 1405 aa12.22□□□□□ -0.45
SCML4-209ENST00000473515 FTSJ3Q8IY81 847 aaKnown RBP12.21□□□□□ -0.45
SCML4-209ENST00000473515 KIF7Q2M1P5 1343 aa12.21□□□□□ -0.46
SCML4-209ENST00000473515 ZBED9Q6R2W3 1325 aa12.21□□□□□ -0.46
SCML4-209ENST00000473515 URB2Q14146 1524 aaKnown RBP12.21□□□□□ -0.46
SCML4-209ENST00000473515 OSCARQ8IYS5 282 aa12.2□□□□□ -0.46
SCML4-209ENST00000473515 CCDC184Q52MB2 194 aa12.2□□□□□ -0.46
SCML4-209ENST00000473515 LMOD2Q6P5Q4 547 aa12.2□□□□□ -0.46
SCML4-209ENST00000473515 CCDC146Q8IYE0 955 aa12.2□□□□□ -0.46
SCML4-209ENST00000473515 NBPF8Q3BBV2 869 aa12.19□□□□□ -0.46
SCML4-209ENST00000473515 PTPN23Q9H3S7 1636 aa12.19□□□□□ -0.46
SCML4-209ENST00000473515 NAIPQ13075 1403 aa12.19□□□□□ -0.46
SCML4-209ENST00000473515 LAMC3Q9Y6N6 1575 aa12.19□□□□□ -0.46
SCML4-209ENST00000473515 U2AF1L5P0DN76 240 aaPredicted RBP12.18□□□□□ -0.46
SCML4-209ENST00000473515 U2AF1Q01081 240 aaKnown RBP eCLIP12.18□□□□□ -0.46
SCML4-209ENST00000473515 CCDC7Q96M83 1385 aa12.18□□□□□ -0.46
SCML4-209ENST00000473515 EHBP1L1Q8N3D4 1523 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms