RNA–Protein interactions for RNA: ENST00000472627.1

SMURF1-203, Transcript of SMAD specific E3 ubiquitin protein ligase 1, humanhuman

TSL 2

Gene SMURF1, Length 825 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMURF1-203ENST00000472627 PREX1Q8TCU6 1659 aa23.48■■□□□ 1.35
SMURF1-203ENST00000472627 SCAPERQ9BY12 1400 aa23.48■■□□□ 1.35
SMURF1-203ENST00000472627 C9orf84Q5VXU9 1444 aa23.47■■□□□ 1.35
SMURF1-203ENST00000472627 ATP10AO60312 1499 aa23.46■■□□□ 1.35
SMURF1-203ENST00000472627 SIGLEC1Q9BZZ2 1709 aa23.45■■□□□ 1.34
SMURF1-203ENST00000472627 ARHGEF12Q9NZN5 1544 aa23.45■■□□□ 1.34
SMURF1-203ENST00000472627 SOCS7O14512 581 aa23.45■■□□□ 1.34
SMURF1-203ENST00000472627 PLCH2O75038 1416 aa23.44■■□□□ 1.34
SMURF1-203ENST00000472627 EEA1Q15075 1411 aa23.44■■□□□ 1.34
SMURF1-203ENST00000472627 UHRF1BP1Q6BDS2 1440 aa23.42■■□□□ 1.34
SMURF1-203ENST00000472627 EFCAB2Q5VUJ9 269 aa23.41■■□□□ 1.34
SMURF1-203ENST00000472627 CDK11AQ9UQ88 783 aaPredicted RBP23.37■■□□□ 1.33
SMURF1-203ENST00000472627 CDK13Q14004 1512 aaKnown RBP23.36■■□□□ 1.33
SMURF1-203ENST00000472627 ZNF518AQ6AHZ1 1483 aa23.36■■□□□ 1.33
SMURF1-203ENST00000472627 CEBPAP49715 358 aaPredicted RBP23.35■■□□□ 1.33
SMURF1-203ENST00000472627 ILDR2Q71H61 639 aa23.35■■□□□ 1.33
SMURF1-203ENST00000472627 MYT1LQ9UL68 1186 aa23.35■■□□□ 1.33
SMURF1-203ENST00000472627 MYO5CQ9NQX4 1742 aa23.33■■□□□ 1.33
SMURF1-203ENST00000472627 ESF1Q9H501 851 aaKnown RBP23.33■■□□□ 1.33
SMURF1-203ENST00000472627 SPATA31D1Q6ZQQ2 1576 aa23.32■■□□□ 1.32
SMURF1-203ENST00000472627 PTPRTO14522 1441 aa23.31■■□□□ 1.32
SMURF1-203ENST00000472627 STRCQ7RTU9 1775 aa23.3■■□□□ 1.32
SMURF1-203ENST00000472627 ATP1B4Q9UN42 357 aaPredicted RBP23.3■■□□□ 1.32
SMURF1-203ENST00000472627 SETD1BQ9UPS6 1966 aaKnown RBP23.3■■□□□ 1.32
SMURF1-203ENST00000472627 FMN1Q68DA7 1419 aa23.28■■□□□ 1.32
SMURF1-203ENST00000472627 KIF14Q15058 1648 aa23.27■■□□□ 1.32
SMURF1-203ENST00000472627 ARHGAP5Q13017 1502 aa23.27■■□□□ 1.32
SMURF1-203ENST00000472627 KDM5CP41229 1560 aa23.26■■□□□ 1.31
SMURF1-203ENST00000472627 CLIP1P30622 1438 aa23.25■■□□□ 1.31
SMURF1-203ENST00000472627 IQSEC2Q5JU85 1478 aa23.24■■□□□ 1.31
SMURF1-203ENST00000472627 REREQ9P2R6 1566 aa23.24■■□□□ 1.31
SMURF1-203ENST00000472627 AFAP1Q8N556 730 aa23.22■■□□□ 1.31
SMURF1-203ENST00000472627 DIP2CQ9Y2E4 1556 aa23.2■■□□□ 1.3
SMURF1-203ENST00000472627 TROQ12816 1431 aaPredicted RBP23.2■■□□□ 1.3
SMURF1-203ENST00000472627 TRAPPC8Q9Y2L5 1435 aa23.2■■□□□ 1.3
SMURF1-203ENST00000472627 MLH3Q9UHC1 1453 aa23.18■■□□□ 1.3
SMURF1-203ENST00000472627 CNTLNQ9NXG0 1405 aa23.18■■□□□ 1.3
SMURF1-203ENST00000472627 C3P01024 1663 aa23.18■■□□□ 1.3
SMURF1-203ENST00000472627 AGLP35573 1532 aa23.17■■□□□ 1.3
SMURF1-203ENST00000472627 LTBP4Q8N2S1 1624 aa23.14■■□□□ 1.29
SMURF1-203ENST00000472627 NCOA1Q15788 1441 aa23.14■■□□□ 1.29
SMURF1-203ENST00000472627 ABCA6Q8N139 1617 aa23.13■■□□□ 1.29
SMURF1-203ENST00000472627 UBTFP17480 764 aaKnown RBP23.13■■□□□ 1.29
SMURF1-203ENST00000472627 NPATQ14207 1427 aa23.08■■□□□ 1.29
SMURF1-203ENST00000472627 ABCC1P33527 1531 aa23.08■■□□□ 1.28
SMURF1-203ENST00000472627 ARHGAP35Q9NRY4 1499 aa23.06■■□□□ 1.28
SMURF1-203ENST00000472627 CAMSAP1Q5T5Y3 1602 aa23.05■■□□□ 1.28
SMURF1-203ENST00000472627 PREX2Q70Z35 1606 aa23.05■■□□□ 1.28
SMURF1-203ENST00000472627 CDC42BPBQ9Y5S2 1711 aa23.04■■□□□ 1.28
SMURF1-203ENST00000472627 UBAP1LF5GYI3 381 aa23.03■■□□□ 1.28
SMURF1-203ENST00000472627 ITSN2Q9NZM3 1697 aa23.03■■□□□ 1.28
SMURF1-203ENST00000472627 MROH2AA6NES4 1674 aa23.02■■□□□ 1.28
SMURF1-203ENST00000472627 CCDC18Q5T9S5 1454 aa23.01■■□□□ 1.27
SMURF1-203ENST00000472627 PKD2Q13563 968 aa23■■□□□ 1.27
SMURF1-203ENST00000472627 EHMT2Q96KQ7 1210 aa22.99■■□□□ 1.27
SMURF1-203ENST00000472627 ZMYM3Q14202 1370 aa22.99■■□□□ 1.27
SMURF1-203ENST00000472627 KIDINS220Q9ULH0 1771 aa22.99■■□□□ 1.27
SMURF1-203ENST00000472627 PLA2R1Q13018 1463 aa22.97■■□□□ 1.27
SMURF1-203ENST00000472627 ZNF335Q9H4Z2 1342 aaPredicted RBP22.96■■□□□ 1.27
SMURF1-203ENST00000472627 NCKAP5LQ9HCH0 1330 aa22.95■■□□□ 1.26
SMURF1-203ENST00000472627 SPAG9O60271 1321 aaKnown RBP22.94■■□□□ 1.26
SMURF1-203ENST00000472627 ZNF777Q9ULD5 760 aaPredicted RBP22.92■■□□□ 1.26
SMURF1-203ENST00000472627 SAMD9LQ8IVG5 1584 aa22.92■■□□□ 1.26
SMURF1-203ENST00000472627 LRRIQ1Q96JM4 1722 aa22.91■■□□□ 1.26
SMURF1-203ENST00000472627 ZNF142P52746 1687 aaPredicted RBP22.91■■□□□ 1.26
SMURF1-203ENST00000472627 CASKIN1Q8WXD9 1431 aa22.91■■□□□ 1.26
SMURF1-203ENST00000472627 MYO3AQ8NEV4 1616 aa22.9■■□□□ 1.26
SMURF1-203ENST00000472627 PPP6R1Q9UPN7 881 aa22.9■■□□□ 1.26
SMURF1-203ENST00000472627 CEP170BQ9Y4F5 1589 aaPredicted RBP22.89■■□□□ 1.26
SMURF1-203ENST00000472627 SUPT6HQ7KZ85 1726 aaKnown RBP22.89■■□□□ 1.26
SMURF1-203ENST00000472627 CDC42BPAQ5VT25 1732 aa22.88■■□□□ 1.25
SMURF1-203ENST00000472627 TCOF1Q13428 1488 aaKnown RBP22.88■■□□□ 1.25
SMURF1-203ENST00000472627 SYCP2Q9BX26 1530 aa22.87■■□□□ 1.25
SMURF1-203ENST00000472627 CLTCQ00610 1675 aaKnown RBP22.87■■□□□ 1.25
SMURF1-203ENST00000472627 PLEKHH2Q8IVE3 1493 aa22.86■■□□□ 1.25
SMURF1-203ENST00000472627 ATP7AQ04656 1500 aa22.86■■□□□ 1.25
SMURF1-203ENST00000472627 SCAF1Q9H7N4 1312 aaKnown RBP22.85■■□□□ 1.25
SMURF1-203ENST00000472627 PTPRKQ15262 1439 aa22.84■■□□□ 1.25
SMURF1-203ENST00000472627 A2MP01023 1474 aa22.84■■□□□ 1.25
SMURF1-203ENST00000472627 TOM1O60784 492 aa22.83■■□□□ 1.25
SMURF1-203ENST00000472627 GGT6Q6P531 493 aa22.83■■□□□ 1.25
SMURF1-203ENST00000472627 KIAA1107Q9UPP5 1409 aa22.82■■□□□ 1.24
SMURF1-203ENST00000472627 PLXNC1O60486 1568 aa22.82■■□□□ 1.24
SMURF1-203ENST00000472627 HNRNPMP52272 730 aaKnown RBP eCLIP22.81■■□□□ 1.245e-7■■■■□ 21.4
SMURF1-203ENST00000472627 FYCO1Q9BQS8 1478 aa22.8■■□□□ 1.24
SMURF1-203ENST00000472627 GPATCH8Q9UKJ3 1502 aaKnown RBP22.79■■□□□ 1.24
SMURF1-203ENST00000472627 CFDP1Q9UEE9 299 aaPredicted RBP22.79■■□□□ 1.24
SMURF1-203ENST00000472627 INO80Q9ULG1 1556 aaPredicted RBP22.79■■□□□ 1.24
SMURF1-203ENST00000472627 CPS1P31327 1500 aa22.78■■□□□ 1.24
SMURF1-203ENST00000472627 PIP4K2BP78356 416 aa22.78■■□□□ 1.24
SMURF1-203ENST00000472627 A2ML1A8K2U0 1454 aa22.78■■□□□ 1.24
SMURF1-203ENST00000472627 MED1Q15648 1581 aaPredicted RBP22.77■■□□□ 1.24
SMURF1-203ENST00000472627 HSPA1LP34931 641 aa22.76■■□□□ 1.23
SMURF1-203ENST00000472627 PHF23Q9BUL5 403 aaPredicted RBP22.75■■□□□ 1.23
SMURF1-203ENST00000472627 CCNB3Q8WWL7 1395 aa22.75■■□□□ 1.23
SMURF1-203ENST00000472627 ADGBQ8N7X0 1667 aa22.74■■□□□ 1.23
SMURF1-203ENST00000472627 DNMT1P26358 1616 aaKnown RBP22.71■■□□□ 1.23
SMURF1-203ENST00000472627 SHANK2Q9UPX8 1470 aa22.7■■□□□ 1.22
SMURF1-203ENST00000472627 POLR1AO95602 1720 aaPredicted RBP22.69■■□□□ 1.22
SMURF1-203ENST00000472627 TNRQ92752 1358 aa22.68■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 78.8 ms