RNA–Protein interactions for RNA: ENST00000471996.1

SORT1-203, Transcript of sortilin 1, humanhuman

TSL 3

Gene SORT1, Length 469 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-203ENST00000471996 PLCH2O75038 1416 aa32.1■■■□□ 2.73
SORT1-203ENST00000471996 ARHGEF12Q9NZN5 1544 aa32.09■■■□□ 2.73
SORT1-203ENST00000471996 ATP10AO60312 1499 aa32.09■■■□□ 2.73
SORT1-203ENST00000471996 C9orf84Q5VXU9 1444 aa32.05■■■□□ 2.72
SORT1-203ENST00000471996 CEBPAP49715 358 aaPredicted RBP32.04■■■□□ 2.72
SORT1-203ENST00000471996 DMRT2Q9Y5R5 561 aa32.04■■■□□ 2.72
SORT1-203ENST00000471996 DISP3Q9P2K9 1392 aa32.04■■■□□ 2.72
SORT1-203ENST00000471996 EEA1Q15075 1411 aa32.03■■■□□ 2.72
SORT1-203ENST00000471996 ILDR2Q71H61 639 aa32.03■■■□□ 2.72
SORT1-203ENST00000471996 CDK13Q14004 1512 aaKnown RBP32.02■■■□□ 2.72
SORT1-203ENST00000471996 PREX1Q8TCU6 1659 aa32.01■■■□□ 2.71
SORT1-203ENST00000471996 EFCAB2Q5VUJ9 269 aa32■■■□□ 2.71
SORT1-203ENST00000471996 SOCS7O14512 581 aa31.98■■■□□ 2.71
SORT1-203ENST00000471996 UHRF1BP1Q6BDS2 1440 aa31.92■■■□□ 2.7
SORT1-203ENST00000471996 STRCQ7RTU9 1775 aa31.91■■■□□ 2.7
SORT1-203ENST00000471996 ZNF518AQ6AHZ1 1483 aa31.89■■■□□ 2.7
SORT1-203ENST00000471996 AFAP1Q8N556 730 aa31.87■■■□□ 2.69
SORT1-203ENST00000471996 CDK11AQ9UQ88 783 aaPredicted RBP31.86■■■□□ 2.69
SORT1-203ENST00000471996 ATP1B4Q9UN42 357 aaPredicted RBP31.85■■■□□ 2.69
SORT1-203ENST00000471996 PTPRTO14522 1441 aa31.83■■■□□ 2.69
SORT1-203ENST00000471996 MYO5CQ9NQX4 1742 aa31.83■■■□□ 2.69
SORT1-203ENST00000471996 KDM5CP41229 1560 aa31.82■■■□□ 2.68
SORT1-203ENST00000471996 MYT1LQ9UL68 1186 aa31.8■■■□□ 2.68
SORT1-203ENST00000471996 FMN1Q68DA7 1419 aa31.79■■■□□ 2.68
SORT1-203ENST00000471996 SETD1BQ9UPS6 1966 aaKnown RBP31.79■■■□□ 2.68
SORT1-203ENST00000471996 ARHGAP5Q13017 1502 aa31.77■■■□□ 2.68
SORT1-203ENST00000471996 KIF14Q15058 1648 aa31.76■■■□□ 2.67
SORT1-203ENST00000471996 REREQ9P2R6 1566 aa31.76■■■□□ 2.67
SORT1-203ENST00000471996 DIP2CQ9Y2E4 1556 aa31.76■■■□□ 2.67
SORT1-203ENST00000471996 TROQ12816 1431 aaPredicted RBP31.75■■■□□ 2.67
SORT1-203ENST00000471996 SPATA31D1Q6ZQQ2 1576 aa31.73■■■□□ 2.67
SORT1-203ENST00000471996 MLH3Q9UHC1 1453 aa31.72■■■□□ 2.67
SORT1-203ENST00000471996 ESF1Q9H501 851 aaKnown RBP31.71■■■□□ 2.67
SORT1-203ENST00000471996 TRAPPC8Q9Y2L5 1435 aa31.71■■■□□ 2.67
SORT1-203ENST00000471996 LTBP4Q8N2S1 1624 aa31.7■■■□□ 2.66
SORT1-203ENST00000471996 CLIP1P30622 1438 aa31.69■■■□□ 2.66
SORT1-203ENST00000471996 C3P01024 1663 aa31.69■■■□□ 2.66
SORT1-203ENST00000471996 AGLP35573 1532 aa31.68■■■□□ 2.66
SORT1-203ENST00000471996 IQSEC2Q5JU85 1478 aa31.66■■■□□ 2.66
SORT1-203ENST00000471996 ARHGAP35Q9NRY4 1499 aa31.66■■■□□ 2.66
SORT1-203ENST00000471996 ABCA6Q8N139 1617 aa31.66■■■□□ 2.66
SORT1-203ENST00000471996 UBTFP17480 764 aaKnown RBP31.65■■■□□ 2.66
SORT1-203ENST00000471996 NCOA1Q15788 1441 aa31.64■■■□□ 2.66
SORT1-203ENST00000471996 CNTLNQ9NXG0 1405 aa31.6■■■□□ 2.65
SORT1-203ENST00000471996 EHMT2Q96KQ7 1210 aa31.59■■■□□ 2.65
SORT1-203ENST00000471996 ABCC1P33527 1531 aa31.56■■■□□ 2.64
SORT1-203ENST00000471996 CDC42BPBQ9Y5S2 1711 aa31.56■■■□□ 2.64
SORT1-203ENST00000471996 NPATQ14207 1427 aa31.52■■■□□ 2.64
SORT1-203ENST00000471996 PREX2Q70Z35 1606 aa31.5■■■□□ 2.63
SORT1-203ENST00000471996 CAMSAP1Q5T5Y3 1602 aa31.49■■■□□ 2.63
SORT1-203ENST00000471996 KIDINS220Q9ULH0 1771 aa31.48■■■□□ 2.63
SORT1-203ENST00000471996 ITSN2Q9NZM3 1697 aa31.48■■■□□ 2.63
SORT1-203ENST00000471996 ZMYM3Q14202 1370 aa31.47■■■□□ 2.63
SORT1-203ENST00000471996 LRRIQ1Q96JM4 1722 aa31.46■■■□□ 2.63
SORT1-203ENST00000471996 NCKAP5LQ9HCH0 1330 aa31.46■■■□□ 2.63
SORT1-203ENST00000471996 ZNF335Q9H4Z2 1342 aaPredicted RBP31.44■■■□□ 2.62
SORT1-203ENST00000471996 UBAP1LF5GYI3 381 aa31.43■■■□□ 2.62
SORT1-203ENST00000471996 MROH2AA6NES4 1674 aa31.41■■■□□ 2.62
SORT1-203ENST00000471996 CCDC18Q5T9S5 1454 aa31.4■■■□□ 2.62
SORT1-203ENST00000471996 SAMD9LQ8IVG5 1584 aa31.39■■■□□ 2.61
SORT1-203ENST00000471996 PKD2Q13563 968 aa31.38■■■□□ 2.61
SORT1-203ENST00000471996 CASKIN1Q8WXD9 1431 aa31.37■■■□□ 2.61
SORT1-203ENST00000471996 SPAG9O60271 1321 aaKnown RBP31.36■■■□□ 2.61
SORT1-203ENST00000471996 PLA2R1Q13018 1463 aa31.35■■■□□ 2.61
SORT1-203ENST00000471996 ZNF777Q9ULD5 760 aaPredicted RBP31.35■■■□□ 2.61
SORT1-203ENST00000471996 CDC42BPAQ5VT25 1732 aa31.32■■■□□ 2.6
SORT1-203ENST00000471996 TCOF1Q13428 1488 aaKnown RBP31.31■■■□□ 2.6
SORT1-203ENST00000471996 HNRNPMP52272 730 aaKnown RBP eCLIP31.3■■■□□ 2.63e-9■■■■□ 23.5
SORT1-203ENST00000471996 PTPRKQ15262 1439 aa31.29■■■□□ 2.6
SORT1-203ENST00000471996 SYCP2Q9BX26 1530 aa31.29■■■□□ 2.6
SORT1-203ENST00000471996 ZNF142P52746 1687 aaPredicted RBP31.27■■■□□ 2.6
SORT1-203ENST00000471996 MYO3AQ8NEV4 1616 aa31.27■■■□□ 2.6
SORT1-203ENST00000471996 GPATCH8Q9UKJ3 1502 aaKnown RBP31.26■■■□□ 2.59
SORT1-203ENST00000471996 SUPT6HQ7KZ85 1726 aaKnown RBP31.26■■■□□ 2.59
SORT1-203ENST00000471996 CEP170BQ9Y4F5 1589 aaPredicted RBP31.26■■■□□ 2.59
SORT1-203ENST00000471996 PPP6R1Q9UPN7 881 aa31.25■■■□□ 2.59
SORT1-203ENST00000471996 A2MP01023 1474 aa31.24■■■□□ 2.59
SORT1-203ENST00000471996 PLXNC1O60486 1568 aa31.24■■■□□ 2.59
SORT1-203ENST00000471996 CLTCQ00610 1675 aaKnown RBP31.24■■■□□ 2.59
SORT1-203ENST00000471996 ATP7AQ04656 1500 aa31.24■■■□□ 2.59
SORT1-203ENST00000471996 GGT6Q6P531 493 aa31.23■■■□□ 2.59
SORT1-203ENST00000471996 KIAA1107Q9UPP5 1409 aa31.23■■■□□ 2.59
SORT1-203ENST00000471996 INO80Q9ULG1 1556 aaPredicted RBP31.17■■■□□ 2.58
SORT1-203ENST00000471996 PLEKHH2Q8IVE3 1493 aa31.17■■■□□ 2.58
SORT1-203ENST00000471996 FYCO1Q9BQS8 1478 aa31.17■■■□□ 2.58
SORT1-203ENST00000471996 CFDP1Q9UEE9 299 aaPredicted RBP31.17■■■□□ 2.58
SORT1-203ENST00000471996 HSPA1LP34931 641 aa31.15■■■□□ 2.58
SORT1-203ENST00000471996 A2ML1A8K2U0 1454 aa31.14■■■□□ 2.57
SORT1-203ENST00000471996 SCAF1Q9H7N4 1312 aaKnown RBP31.11■■■□□ 2.57
SORT1-203ENST00000471996 TOM1O60784 492 aa31.1■■■□□ 2.57
SORT1-203ENST00000471996 PIP4K2BP78356 416 aa31.1■■■□□ 2.57
SORT1-203ENST00000471996 CCNB3Q8WWL7 1395 aa31.09■■■□□ 2.57
SORT1-203ENST00000471996 DNMT1P26358 1616 aaKnown RBP31.08■■■□□ 2.57
SORT1-203ENST00000471996 MED1Q15648 1581 aaPredicted RBP31.08■■■□□ 2.57
SORT1-203ENST00000471996 CPS1P31327 1500 aa31.06■■■□□ 2.56
SORT1-203ENST00000471996 CHIC1Q5VXU3 224 aa31.05■■■□□ 2.56
SORT1-203ENST00000471996 SHANK2Q9UPX8 1470 aa31.02■■■□□ 2.56
SORT1-203ENST00000471996 ADGBQ8N7X0 1667 aa31.02■■■□□ 2.56
SORT1-203ENST00000471996 TNRQ92752 1358 aa31■■■□□ 2.55
SORT1-203ENST00000471996 FBXO31Q5XUX0 539 aaPredicted RBP30.99■■■□□ 2.55
Retrieved 100 of 20,778 RNA–protein pairs in 123.9 ms