RNA–Protein interactions for RNA: ENST00000470950.1

LDLRAP1-203, Transcript of low density lipoprotein receptor adaptor protein 1, humanhuman

TSL 3

Gene LDLRAP1, Length 995 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAP1-203ENST00000470950 PLCH2O75038 1416 aa22.69■■□□□ 1.22
LDLRAP1-203ENST00000470950 ARHGEF12Q9NZN5 1544 aa22.68■■□□□ 1.22
LDLRAP1-203ENST00000470950 ATP10AO60312 1499 aa22.67■■□□□ 1.22
LDLRAP1-203ENST00000470950 CDK13Q14004 1512 aaKnown RBP22.67■■□□□ 1.22
LDLRAP1-203ENST00000470950 C9orf84Q5VXU9 1444 aa22.65■■□□□ 1.22
LDLRAP1-203ENST00000470950 CEBPAP49715 358 aaPredicted RBP22.65■■□□□ 1.22
LDLRAP1-203ENST00000470950 EEA1Q15075 1411 aa22.65■■□□□ 1.22
LDLRAP1-203ENST00000470950 PREX1Q8TCU6 1659 aa22.65■■□□□ 1.22
LDLRAP1-203ENST00000470950 DMRT2Q9Y5R5 561 aa22.63■■□□□ 1.21
LDLRAP1-203ENST00000470950 DISP3Q9P2K9 1392 aa22.63■■□□□ 1.21
LDLRAP1-203ENST00000470950 EFCAB2Q5VUJ9 269 aa22.62■■□□□ 1.21
LDLRAP1-203ENST00000470950 ILDR2Q71H61 639 aa22.62■■□□□ 1.21
LDLRAP1-203ENST00000470950 STRCQ7RTU9 1775 aa22.58■■□□□ 1.2
LDLRAP1-203ENST00000470950 SOCS7O14512 581 aa22.57■■□□□ 1.2
LDLRAP1-203ENST00000470950 UHRF1BP1Q6BDS2 1440 aa22.57■■□□□ 1.2
LDLRAP1-203ENST00000470950 MYO5CQ9NQX4 1742 aa22.54■■□□□ 1.2
LDLRAP1-203ENST00000470950 ATP1B4Q9UN42 357 aaPredicted RBP22.54■■□□□ 1.2
LDLRAP1-203ENST00000470950 ZNF518AQ6AHZ1 1483 aa22.54■■□□□ 1.2
LDLRAP1-203ENST00000470950 SETD1BQ9UPS6 1966 aaKnown RBP22.52■■□□□ 1.2
LDLRAP1-203ENST00000470950 AFAP1Q8N556 730 aa22.52■■□□□ 1.2
LDLRAP1-203ENST00000470950 CDK11AQ9UQ88 783 aaPredicted RBP22.51■■□□□ 1.19
LDLRAP1-203ENST00000470950 MYT1LQ9UL68 1186 aa22.5■■□□□ 1.19
LDLRAP1-203ENST00000470950 KDM5CP41229 1560 aa22.5■■□□□ 1.19
LDLRAP1-203ENST00000470950 KIF14Q15058 1648 aa22.49■■□□□ 1.19
LDLRAP1-203ENST00000470950 PTPRTO14522 1441 aa22.48■■□□□ 1.19
LDLRAP1-203ENST00000470950 FMN1Q68DA7 1419 aa22.48■■□□□ 1.19
LDLRAP1-203ENST00000470950 ARHGAP5Q13017 1502 aa22.47■■□□□ 1.19
LDLRAP1-203ENST00000470950 DIP2CQ9Y2E4 1556 aa22.46■■□□□ 1.19
LDLRAP1-203ENST00000470950 TROQ12816 1431 aaPredicted RBP22.45■■□□□ 1.18
LDLRAP1-203ENST00000470950 REREQ9P2R6 1566 aa22.45■■□□□ 1.18
LDLRAP1-203ENST00000470950 SPATA31D1Q6ZQQ2 1576 aa22.43■■□□□ 1.18
LDLRAP1-203ENST00000470950 C3P01024 1663 aa22.42■■□□□ 1.18
LDLRAP1-203ENST00000470950 ESF1Q9H501 851 aaKnown RBP22.42■■□□□ 1.18
LDLRAP1-203ENST00000470950 MLH3Q9UHC1 1453 aa22.41■■□□□ 1.18
LDLRAP1-203ENST00000470950 CLIP1P30622 1438 aa22.4■■□□□ 1.18
LDLRAP1-203ENST00000470950 TRAPPC8Q9Y2L5 1435 aa22.4■■□□□ 1.18
LDLRAP1-203ENST00000470950 ABCA6Q8N139 1617 aa22.4■■□□□ 1.18
LDLRAP1-203ENST00000470950 LTBP4Q8N2S1 1624 aa22.4■■□□□ 1.18
LDLRAP1-203ENST00000470950 ARHGAP35Q9NRY4 1499 aa22.4■■□□□ 1.18
LDLRAP1-203ENST00000470950 UBTFP17480 764 aaKnown RBP22.39■■□□□ 1.17
LDLRAP1-203ENST00000470950 AGLP35573 1532 aa22.39■■□□□ 1.17
LDLRAP1-203ENST00000470950 EHMT2Q96KQ7 1210 aa22.38■■□□□ 1.17
LDLRAP1-203ENST00000470950 IQSEC2Q5JU85 1478 aa22.36■■□□□ 1.17
LDLRAP1-203ENST00000470950 NCOA1Q15788 1441 aa22.36■■□□□ 1.17
LDLRAP1-203ENST00000470950 CDC42BPBQ9Y5S2 1711 aa22.35■■□□□ 1.17
LDLRAP1-203ENST00000470950 CNTLNQ9NXG0 1405 aa22.33■■□□□ 1.17
LDLRAP1-203ENST00000470950 ABCC1P33527 1531 aa22.32■■□□□ 1.16
LDLRAP1-203ENST00000470950 LRRIQ1Q96JM4 1722 aa22.31■■□□□ 1.16
LDLRAP1-203ENST00000470950 PREX2Q70Z35 1606 aa22.3■■□□□ 1.16
LDLRAP1-203ENST00000470950 ITSN2Q9NZM3 1697 aa22.29■■□□□ 1.16
LDLRAP1-203ENST00000470950 KIDINS220Q9ULH0 1771 aa22.28■■□□□ 1.16
LDLRAP1-203ENST00000470950 CAMSAP1Q5T5Y3 1602 aa22.28■■□□□ 1.16
LDLRAP1-203ENST00000470950 NPATQ14207 1427 aa22.27■■□□□ 1.16
LDLRAP1-203ENST00000470950 NCKAP5LQ9HCH0 1330 aa22.24■■□□□ 1.15
LDLRAP1-203ENST00000470950 ZMYM3Q14202 1370 aa22.24■■□□□ 1.15
LDLRAP1-203ENST00000470950 MROH2AA6NES4 1674 aa22.22■■□□□ 1.15
LDLRAP1-203ENST00000470950 ZNF335Q9H4Z2 1342 aaPredicted RBP22.22■■□□□ 1.15
LDLRAP1-203ENST00000470950 UBAP1LF5GYI3 381 aa22.21■■□□□ 1.15
LDLRAP1-203ENST00000470950 CCDC18Q5T9S5 1454 aa22.21■■□□□ 1.15
LDLRAP1-203ENST00000470950 SAMD9LQ8IVG5 1584 aa22.2■■□□□ 1.14
LDLRAP1-203ENST00000470950 CDC42BPAQ5VT25 1732 aa22.19■■□□□ 1.14
LDLRAP1-203ENST00000470950 CASKIN1Q8WXD9 1431 aa22.18■■□□□ 1.14
LDLRAP1-203ENST00000470950 ZNF777Q9ULD5 760 aaPredicted RBP22.18■■□□□ 1.14
LDLRAP1-203ENST00000470950 SPAG9O60271 1321 aaKnown RBP22.17■■□□□ 1.14
LDLRAP1-203ENST00000470950 PKD2Q13563 968 aa22.17■■□□□ 1.14
LDLRAP1-203ENST00000470950 PLA2R1Q13018 1463 aa22.15■■□□□ 1.14
LDLRAP1-203ENST00000470950 SUPT6HQ7KZ85 1726 aaKnown RBP22.14■■□□□ 1.13
LDLRAP1-203ENST00000470950 SYCP2Q9BX26 1530 aa22.13■■□□□ 1.13
LDLRAP1-203ENST00000470950 HNRNPMP52272 730 aaKnown RBP eCLIP22.13■■□□□ 1.13
LDLRAP1-203ENST00000470950 ZNF142P52746 1687 aaPredicted RBP22.13■■□□□ 1.13
LDLRAP1-203ENST00000470950 CLTCQ00610 1675 aaKnown RBP22.12■■□□□ 1.13
LDLRAP1-203ENST00000470950 TCOF1Q13428 1488 aaKnown RBP22.12■■□□□ 1.13
LDLRAP1-203ENST00000470950 MYO3AQ8NEV4 1616 aa22.12■■□□□ 1.13
LDLRAP1-203ENST00000470950 PTPRKQ15262 1439 aa22.12■■□□□ 1.13
LDLRAP1-203ENST00000470950 GPATCH8Q9UKJ3 1502 aaKnown RBP22.11■■□□□ 1.13
LDLRAP1-203ENST00000470950 CEP170BQ9Y4F5 1589 aaPredicted RBP22.1■■□□□ 1.13
LDLRAP1-203ENST00000470950 ATP7AQ04656 1500 aa22.1■■□□□ 1.13
LDLRAP1-203ENST00000470950 GGT6Q6P531 493 aa22.09■■□□□ 1.13
LDLRAP1-203ENST00000470950 A2MP01023 1474 aa22.09■■□□□ 1.13
LDLRAP1-203ENST00000470950 PLXNC1O60486 1568 aa22.08■■□□□ 1.13
LDLRAP1-203ENST00000470950 PPP6R1Q9UPN7 881 aa22.08■■□□□ 1.13
LDLRAP1-203ENST00000470950 KIAA1107Q9UPP5 1409 aa22.07■■□□□ 1.12
LDLRAP1-203ENST00000470950 INO80Q9ULG1 1556 aaPredicted RBP22.05■■□□□ 1.12
LDLRAP1-203ENST00000470950 FYCO1Q9BQS8 1478 aa22.05■■□□□ 1.12
LDLRAP1-203ENST00000470950 PLEKHH2Q8IVE3 1493 aa22.04■■□□□ 1.12
LDLRAP1-203ENST00000470950 CFDP1Q9UEE9 299 aaPredicted RBP22.04■■□□□ 1.12
LDLRAP1-203ENST00000470950 HSPA1LP34931 641 aa22.01■■□□□ 1.11
LDLRAP1-203ENST00000470950 A2ML1A8K2U0 1454 aa22.01■■□□□ 1.11
LDLRAP1-203ENST00000470950 SCAF1Q9H7N4 1312 aaKnown RBP22■■□□□ 1.11
LDLRAP1-203ENST00000470950 CCNB3Q8WWL7 1395 aa21.99■■□□□ 1.11
LDLRAP1-203ENST00000470950 PIP4K2BP78356 416 aa21.98■■□□□ 1.11
LDLRAP1-203ENST00000470950 DNMT1P26358 1616 aaKnown RBP21.98■■□□□ 1.11
LDLRAP1-203ENST00000470950 TOM1O60784 492 aa21.97■■□□□ 1.11
LDLRAP1-203ENST00000470950 CHIC1Q5VXU3 224 aa21.97■■□□□ 1.11
LDLRAP1-203ENST00000470950 MED1Q15648 1581 aaPredicted RBP21.96■■□□□ 1.11
LDLRAP1-203ENST00000470950 ADGBQ8N7X0 1667 aa21.96■■□□□ 1.11
LDLRAP1-203ENST00000470950 CPS1P31327 1500 aa21.95■■□□□ 1.1
LDLRAP1-203ENST00000470950 SHANK2Q9UPX8 1470 aa21.92■■□□□ 1.1
LDLRAP1-203ENST00000470950 NEURL4Q96JN8 1562 aa21.91■■□□□ 1.1
LDLRAP1-203ENST00000470950 ZNF644Q9H582 1327 aaPredicted RBP21.91■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms