RNA–Protein interactions for RNA: ENST00000469786.2

PSMD4-209, Transcript of proteasome 26S subunit, non-ATPase 4, humanhuman

TSL 5

Gene PSMD4, Length 408 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD4-209ENST00000469786 PPP6R1Q9UPN7 881 aa14.19□□□□□ -0.14
PSMD4-209ENST00000469786 CEBPAP49715 358 aaPredicted RBP14.18□□□□□ -0.14
PSMD4-209ENST00000469786 NCOA1Q15788 1441 aa14.17□□□□□ -0.14
PSMD4-209ENST00000469786 CTTNBP2Q8WZ74 1663 aa14.17□□□□□ -0.14
PSMD4-209ENST00000469786 HECW1Q76N89 1606 aa14.15□□□□□ -0.14
PSMD4-209ENST00000469786 RAPGEF2Q9Y4G8 1499 aa14.15□□□□□ -0.14
PSMD4-209ENST00000469786 C3P01024 1663 aa14.14□□□□□ -0.15
PSMD4-209ENST00000469786 GOLGA3Q08378 1498 aa14.14□□□□□ -0.15
PSMD4-209ENST00000469786 UBAP1LF5GYI3 381 aa14.13□□□□□ -0.15
PSMD4-209ENST00000469786 HSPA1LP34931 641 aa14.12□□□□□ -0.15
PSMD4-209ENST00000469786 MLECQ14165 292 aa14.11□□□□□ -0.15
PSMD4-209ENST00000469786 CFAP74Q9C0B2 1584 aa14.11□□□□□ -0.15
PSMD4-209ENST00000469786 ADRA2BP18089 450 aa14.09□□□□□ -0.15
PSMD4-209ENST00000469786 ATP10AO60312 1499 aa14.08□□□□□ -0.16
PSMD4-209ENST00000469786 ZNF335Q9H4Z2 1342 aaPredicted RBP14.08□□□□□ -0.16
PSMD4-209ENST00000469786 C9orf84Q5VXU9 1444 aa14.07□□□□□ -0.16
PSMD4-209ENST00000469786 ALKQ9UM73 1620 aa14.05□□□□□ -0.16
PSMD4-209ENST00000469786 CAMSAP1Q5T5Y3 1602 aa14.04□□□□□ -0.16
PSMD4-209ENST00000469786 RGS17Q9UGC6 210 aaPredicted RBP14.04□□□□□ -0.16
PSMD4-209ENST00000469786 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.04□□□□□ -0.16
PSMD4-209ENST00000469786 ARID3CA6NKF2 412 aa14.03□□□□□ -0.16
PSMD4-209ENST00000469786 TRAPPC8Q9Y2L5 1435 aa14.03□□□□□ -0.16
PSMD4-209ENST00000469786 RAPGEF6Q8TEU7 1601 aa14.01□□□□□ -0.17
PSMD4-209ENST00000469786 REREQ9P2R6 1566 aa14.01□□□□□ -0.17
PSMD4-209ENST00000469786 NUP153P49790 1475 aaKnown RBP13.99□□□□□ -0.17
PSMD4-209ENST00000469786 TCOF1Q13428 1488 aaKnown RBP13.99□□□□□ -0.17
PSMD4-209ENST00000469786 PLA2R1Q13018 1463 aa13.97□□□□□ -0.17
PSMD4-209ENST00000469786 ZNF142P52746 1687 aaPredicted RBP13.97□□□□□ -0.17
PSMD4-209ENST00000469786 AGLP35573 1532 aa13.96□□□□□ -0.17
PSMD4-209ENST00000469786 SCAPERQ9BY12 1400 aa13.96□□□□□ -0.18
PSMD4-209ENST00000469786 KDM5CP41229 1560 aa13.95□□□□□ -0.18
PSMD4-209ENST00000469786 DIP2CQ9Y2E4 1556 aa13.95□□□□□ -0.18
PSMD4-209ENST00000469786 NCKAP5LQ9HCH0 1330 aa13.94□□□□□ -0.18
PSMD4-209ENST00000469786 SAMD9Q5K651 1589 aa13.94□□□□□ -0.18
PSMD4-209ENST00000469786 NPATQ14207 1427 aa13.93□□□□□ -0.18
PSMD4-209ENST00000469786 MROH2AA6NES4 1674 aa13.92□□□□□ -0.18
PSMD4-209ENST00000469786 PLCH2O75038 1416 aa13.9□□□□□ -0.18
PSMD4-209ENST00000469786 CPS1P31327 1500 aa13.9□□□□□ -0.18
PSMD4-209ENST00000469786 PIP4K2BP78356 416 aa13.9□□□□□ -0.18
PSMD4-209ENST00000469786 PKD2Q13563 968 aa13.9□□□□□ -0.18
PSMD4-209ENST00000469786 SRCAPQ6ZRS2 3230 aa13.9□□□□□ -0.18
PSMD4-209ENST00000469786 ABCA6Q8N139 1617 aa13.9□□□□□ -0.19
PSMD4-209ENST00000469786 SUPT5HO00267 1087 aaKnown RBP13.89□□□□□ -0.19
PSMD4-209ENST00000469786 TOM1O60784 492 aa13.89□□□□□ -0.19
PSMD4-209ENST00000469786 SUPT6HQ7KZ85 1726 aaKnown RBP13.89□□□□□ -0.19
PSMD4-209ENST00000469786 MYO3AQ8NEV4 1616 aa13.88□□□□□ -0.19
PSMD4-209ENST00000469786 SETD1AO15047 1707 aaKnown RBP13.87□□□□□ -0.19
PSMD4-209ENST00000469786 CNTLNQ9NXG0 1405 aa13.86□□□□□ -0.19
PSMD4-209ENST00000469786 CEP170BQ9Y4F5 1589 aaPredicted RBP13.86□□□□□ -0.19
PSMD4-209ENST00000469786 ZNF518AQ6AHZ1 1483 aa13.86□□□□□ -0.19
PSMD4-209ENST00000469786 PRXQ9BXM0 1461 aa13.86□□□□□ -0.19
PSMD4-209ENST00000469786 POTEAQ6S8J7 498 aa13.85□□□□□ -0.19
PSMD4-209ENST00000469786 SCAF1Q9H7N4 1312 aaKnown RBP13.85□□□□□ -0.19
PSMD4-209ENST00000469786 NEURL4Q96JN8 1562 aa13.84□□□□□ -0.19
PSMD4-209ENST00000469786 SHANK2Q9UPX8 1470 aa13.84□□□□□ -0.19
PSMD4-209ENST00000469786 PTPRKQ15262 1439 aa13.83□□□□□ -0.2
PSMD4-209ENST00000469786 MLH3Q9UHC1 1453 aa13.83□□□□□ -0.2
PSMD4-209ENST00000469786 PLEKHD1A6NEE1 506 aa13.83□□□□□ -0.2
PSMD4-209ENST00000469786 P3H3Q8IVL6 736 aa13.83□□□□□ -0.2
PSMD4-209ENST00000469786 VWDEQ8N2E2 1590 aa13.83□□□□□ -0.2
PSMD4-209ENST00000469786 MYO5CQ9NQX4 1742 aa13.82□□□□□ -0.2
PSMD4-209ENST00000469786 POLR1AO95602 1720 aaPredicted RBP13.81□□□□□ -0.2
PSMD4-209ENST00000469786 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.8□□□□□ -0.2
PSMD4-209ENST00000469786 HNRNPUL2Q1KMD3 747 aaKnown RBP13.8□□□□□ -0.2
PSMD4-209ENST00000469786 STRCP1A6NGW2 1772 aa13.79□□□□□ -0.2
PSMD4-209ENST00000469786 ZMYM3Q14202 1370 aa13.79□□□□□ -0.2
PSMD4-209ENST00000469786 DNMT1P26358 1616 aaKnown RBP13.79□□□□□ -0.2
PSMD4-209ENST00000469786 KIDINS220Q9ULH0 1771 aa13.78□□□□□ -0.2
PSMD4-209ENST00000469786 AFAP1Q8N556 730 aa13.78□□□□□ -0.2
PSMD4-209ENST00000469786 FAM9AQ8IZU1 332 aaPredicted RBP13.77□□□□□ -0.21
PSMD4-209ENST00000469786 EFCAB2Q5VUJ9 269 aa13.74□□□□□ -0.21
PSMD4-209ENST00000469786 RNF17Q9BXT8 1623 aaKnown RBP13.74□□□□□ -0.21
PSMD4-209ENST00000469786 CLTCQ00610 1675 aaKnown RBP13.73□□□□□ -0.21
PSMD4-209ENST00000469786 UPF1Q92900 1129 aaKnown RBP eCLIP13.72□□□□□ -0.21
PSMD4-209ENST00000469786 A2ML1A8K2U0 1454 aa13.72□□□□□ -0.21
PSMD4-209ENST00000469786 LRRC7Q96NW7 1537 aa13.71□□□□□ -0.21
PSMD4-209ENST00000469786 CDC42BPBQ9Y5S2 1711 aa13.71□□□□□ -0.21
PSMD4-209ENST00000469786 ESF1Q9H501 851 aaKnown RBP13.71□□□□□ -0.21
PSMD4-209ENST00000469786 CDK13Q14004 1512 aaKnown RBP13.7□□□□□ -0.22
PSMD4-209ENST00000469786 KIF14Q15058 1648 aa13.7□□□□□ -0.22
PSMD4-209ENST00000469786 MED14O60244 1454 aa13.69□□□□□ -0.22
PSMD4-209ENST00000469786 ITSN2Q9NZM3 1697 aa13.69□□□□□ -0.22
PSMD4-209ENST00000469786 XIRP1Q702N8 1843 aaKnown RBP13.69□□□□□ -0.22
PSMD4-209ENST00000469786 SYNMO15061 1565 aa13.68□□□□□ -0.22
PSMD4-209ENST00000469786 ABCC1P33527 1531 aa13.67□□□□□ -0.22
PSMD4-209ENST00000469786 DEPDC5O75140 1603 aa13.67□□□□□ -0.22
PSMD4-209ENST00000469786 PLXNC1O60486 1568 aa13.66□□□□□ -0.22
PSMD4-209ENST00000469786 ARHGAP5Q13017 1502 aa13.64□□□□□ -0.23
PSMD4-209ENST00000469786 IQGAP1P46940 1657 aa13.61□□□□□ -0.23
PSMD4-209ENST00000469786 FAM135BQ49AJ0 1406 aa13.6□□□□□ -0.23
PSMD4-209ENST00000469786 PREX2Q70Z35 1606 aa13.6□□□□□ -0.23
PSMD4-209ENST00000469786 ZC3H13Q5T200 1668 aaKnown RBP13.59□□□□□ -0.23
PSMD4-209ENST00000469786 SAMD9LQ8IVG5 1584 aa13.59□□□□□ -0.23
PSMD4-209ENST00000469786 NPHP4O75161 1426 aaPredicted RBP13.58□□□□□ -0.24
PSMD4-209ENST00000469786 MYT1LQ9UL68 1186 aa13.55□□□□□ -0.24
PSMD4-209ENST00000469786 TROQ12816 1431 aaPredicted RBP13.55□□□□□ -0.24
PSMD4-209ENST00000469786 LRRIQ1Q96JM4 1722 aa13.54□□□□□ -0.24
PSMD4-209ENST00000469786 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.54□□□□□ -0.24
PSMD4-209ENST00000469786 INO80Q9ULG1 1556 aaPredicted RBP13.54□□□□□ -0.24
PSMD4-209ENST00000469786 ANKLE2Q86XL3 938 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms