RNA–Protein interactions for RNA: ENST00000468876.1

ARHGEF39-202, Transcript of Rho guanine nucleotide exchange factor 39, humanhuman

TSL 2

Gene ARHGEF39, Length 739 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39-202ENST00000468876 CTTNBP2Q8WZ74 1663 aa19.97■□□□□ 0.79
ARHGEF39-202ENST00000468876 SCAF1Q9H7N4 1312 aaKnown RBP19.95■□□□□ 0.78
ARHGEF39-202ENST00000468876 ARHGEF12Q9NZN5 1544 aa19.94■□□□□ 0.78
ARHGEF39-202ENST00000468876 PRXQ9BXM0 1461 aa19.92■□□□□ 0.78
ARHGEF39-202ENST00000468876 ZMYM4Q5VZL5 1548 aa19.92■□□□□ 0.78
ARHGEF39-202ENST00000468876 HSPA1LP34931 641 aa19.91■□□□□ 0.78
ARHGEF39-202ENST00000468876 P3H3Q8IVL6 736 aa19.91■□□□□ 0.78
ARHGEF39-202ENST00000468876 MAGI2Q86UL8 1455 aa19.91■□□□□ 0.78
ARHGEF39-202ENST00000468876 ZNF335Q9H4Z2 1342 aaPredicted RBP19.87■□□□□ 0.77
ARHGEF39-202ENST00000468876 PIP4K2BP78356 416 aa19.86■□□□□ 0.77
ARHGEF39-202ENST00000468876 HECW1Q76N89 1606 aa19.86■□□□□ 0.77
ARHGEF39-202ENST00000468876 CFAP74Q9C0B2 1584 aa19.86■□□□□ 0.77
ARHGEF39-202ENST00000468876 ATP10AO60312 1499 aa19.85■□□□□ 0.77
ARHGEF39-202ENST00000468876 NCOA1Q15788 1441 aa19.85■□□□□ 0.77
ARHGEF39-202ENST00000468876 C9orf84Q5VXU9 1444 aa19.84■□□□□ 0.77
ARHGEF39-202ENST00000468876 SETD1BQ9UPS6 1966 aaKnown RBP19.83■□□□□ 0.77
ARHGEF39-202ENST00000468876 ESF1Q9H501 851 aaKnown RBP19.8■□□□□ 0.76
ARHGEF39-202ENST00000468876 PLEKHD1A6NEE1 506 aa19.78■□□□□ 0.76
ARHGEF39-202ENST00000468876 NCKAP5LQ9HCH0 1330 aa19.77■□□□□ 0.76
ARHGEF39-202ENST00000468876 SCAPERQ9BY12 1400 aa19.77■□□□□ 0.76
ARHGEF39-202ENST00000468876 MYT1LQ9UL68 1186 aa19.75■□□□□ 0.75
ARHGEF39-202ENST00000468876 TRAPPC8Q9Y2L5 1435 aa19.75■□□□□ 0.75
ARHGEF39-202ENST00000468876 RAPGEF6Q8TEU7 1601 aa19.74■□□□□ 0.75
ARHGEF39-202ENST00000468876 CAMSAP1Q5T5Y3 1602 aa19.73■□□□□ 0.75
ARHGEF39-202ENST00000468876 TOM1O60784 492 aa19.73■□□□□ 0.75
ARHGEF39-202ENST00000468876 C3P01024 1663 aa19.71■□□□□ 0.75
ARHGEF39-202ENST00000468876 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.71■□□□□ 0.75
ARHGEF39-202ENST00000468876 SAMD9Q5K651 1589 aa19.7■□□□□ 0.74
ARHGEF39-202ENST00000468876 SENP3Q9H4L4 574 aaPredicted RBP19.69■□□□□ 0.74
ARHGEF39-202ENST00000468876 NUP153P49790 1475 aaKnown RBP19.67■□□□□ 0.74
ARHGEF39-202ENST00000468876 CSRNP3Q8WYN3 585 aa19.67■□□□□ 0.74
ARHGEF39-202ENST00000468876 EEA1Q15075 1411 aa19.65■□□□□ 0.74
ARHGEF39-202ENST00000468876 PKD2Q13563 968 aa19.64■□□□□ 0.73
ARHGEF39-202ENST00000468876 PPP6R1Q9UPN7 881 aa19.63■□□□□ 0.73
ARHGEF39-202ENST00000468876 EFCAB2Q5VUJ9 269 aa19.59■□□□□ 0.73
ARHGEF39-202ENST00000468876 PLCH2O75038 1416 aa19.59■□□□□ 0.73
ARHGEF39-202ENST00000468876 AFAP1Q8N556 730 aa19.58■□□□□ 0.72
ARHGEF39-202ENST00000468876 ZNF518AQ6AHZ1 1483 aa19.56■□□□□ 0.72
ARHGEF39-202ENST00000468876 RGS17Q9UGC6 210 aaPredicted RBP19.56■□□□□ 0.72
ARHGEF39-202ENST00000468876 CNTLNQ9NXG0 1405 aa19.56■□□□□ 0.72
ARHGEF39-202ENST00000468876 NPATQ14207 1427 aa19.54■□□□□ 0.72
ARHGEF39-202ENST00000468876 RANGAP1P46060 587 aaPredicted RBP19.54■□□□□ 0.72
ARHGEF39-202ENST00000468876 PLA2R1Q13018 1463 aa19.54■□□□□ 0.72
ARHGEF39-202ENST00000468876 DIP2CQ9Y2E4 1556 aa19.53■□□□□ 0.72
ARHGEF39-202ENST00000468876 PTPRKQ15262 1439 aa19.51■□□□□ 0.71
ARHGEF39-202ENST00000468876 AGLP35573 1532 aa19.51■□□□□ 0.71
ARHGEF39-202ENST00000468876 TCOF1Q13428 1488 aaKnown RBP19.51■□□□□ 0.71
ARHGEF39-202ENST00000468876 CPS1P31327 1500 aa19.51■□□□□ 0.71
ARHGEF39-202ENST00000468876 REREQ9P2R6 1566 aa19.49■□□□□ 0.71
ARHGEF39-202ENST00000468876 ZMYM3Q14202 1370 aa19.47■□□□□ 0.71
ARHGEF39-202ENST00000468876 KDM5CP41229 1560 aa19.47■□□□□ 0.71
ARHGEF39-202ENST00000468876 SUPT6HQ7KZ85 1726 aaKnown RBP19.46■□□□□ 0.71
ARHGEF39-202ENST00000468876 CHIC1Q5VXU3 224 aa19.46■□□□□ 0.71
ARHGEF39-202ENST00000468876 ABCA6Q8N139 1617 aa19.46■□□□□ 0.71
ARHGEF39-202ENST00000468876 POTEAQ6S8J7 498 aa19.45■□□□□ 0.7
ARHGEF39-202ENST00000468876 SHANK2Q9UPX8 1470 aa19.45■□□□□ 0.7
ARHGEF39-202ENST00000468876 CEP170BQ9Y4F5 1589 aaPredicted RBP19.44■□□□□ 0.7
ARHGEF39-202ENST00000468876 EHMT2Q96KQ7 1210 aa19.43■□□□□ 0.7
ARHGEF39-202ENST00000468876 MYO3AQ8NEV4 1616 aa19.43■□□□□ 0.7
ARHGEF39-202ENST00000468876 MYO5CQ9NQX4 1742 aa19.42■□□□□ 0.7
ARHGEF39-202ENST00000468876 ARHGAP5Q13017 1502 aa19.41■□□□□ 0.7
ARHGEF39-202ENST00000468876 CDK13Q14004 1512 aaKnown RBP19.41■□□□□ 0.7
ARHGEF39-202ENST00000468876 ZNF142P52746 1687 aaPredicted RBP19.41■□□□□ 0.7
ARHGEF39-202ENST00000468876 MLH3Q9UHC1 1453 aa19.4■□□□□ 0.7
ARHGEF39-202ENST00000468876 MROH2AA6NES4 1674 aa19.39■□□□□ 0.69
ARHGEF39-202ENST00000468876 ALKQ9UM73 1620 aa19.38■□□□□ 0.69
ARHGEF39-202ENST00000468876 ATP1B4Q9UN42 357 aaPredicted RBP19.36■□□□□ 0.69
ARHGEF39-202ENST00000468876 ARHGAP35Q9NRY4 1499 aa19.35■□□□□ 0.69
ARHGEF39-202ENST00000468876 SETD1AO15047 1707 aaKnown RBP19.33■□□□□ 0.68
ARHGEF39-202ENST00000468876 A2ML1A8K2U0 1454 aa19.3■□□□□ 0.68
ARHGEF39-202ENST00000468876 CDK11AQ9UQ88 783 aaPredicted RBP19.3■□□□□ 0.68
ARHGEF39-202ENST00000468876 CLTCQ00610 1675 aaKnown RBP19.3■□□□□ 0.68
ARHGEF39-202ENST00000468876 UBTFP17480 764 aaKnown RBP19.29■□□□□ 0.68
ARHGEF39-202ENST00000468876 KIF14Q15058 1648 aa19.27■□□□□ 0.68
ARHGEF39-202ENST00000468876 ANKLE2Q86XL3 938 aa19.27■□□□□ 0.68
ARHGEF39-202ENST00000468876 VWDEQ8N2E2 1590 aa19.27■□□□□ 0.67
ARHGEF39-202ENST00000468876 NEURL4Q96JN8 1562 aa19.27■□□□□ 0.67
ARHGEF39-202ENST00000468876 DNMT1P26358 1616 aaKnown RBP19.26■□□□□ 0.67
ARHGEF39-202ENST00000468876 POLR1AO95602 1720 aaPredicted RBP19.26■□□□□ 0.67
ARHGEF39-202ENST00000468876 GGT6Q6P531 493 aa19.26■□□□□ 0.67
ARHGEF39-202ENST00000468876 UPF1Q92900 1129 aaKnown RBP eCLIP19.26■□□□□ 0.67
ARHGEF39-202ENST00000468876 LRRIQ1Q96JM4 1722 aa19.25■□□□□ 0.67
ARHGEF39-202ENST00000468876 KIDINS220Q9ULH0 1771 aa19.24■□□□□ 0.67
ARHGEF39-202ENST00000468876 FMN1Q68DA7 1419 aa19.24■□□□□ 0.67
ARHGEF39-202ENST00000468876 RNF17Q9BXT8 1623 aaKnown RBP19.22■□□□□ 0.67
ARHGEF39-202ENST00000468876 LRRC7Q96NW7 1537 aa19.21■□□□□ 0.67
ARHGEF39-202ENST00000468876 CLIP1P30622 1438 aa19.21■□□□□ 0.67
ARHGEF39-202ENST00000468876 ABCC1P33527 1531 aa19.2■□□□□ 0.66
ARHGEF39-202ENST00000468876 NPHP4O75161 1426 aaPredicted RBP19.2■□□□□ 0.66
ARHGEF39-202ENST00000468876 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.19■□□□□ 0.66
ARHGEF39-202ENST00000468876 TROQ12816 1431 aaPredicted RBP19.18■□□□□ 0.66
ARHGEF39-202ENST00000468876 ITSN2Q9NZM3 1697 aa19.18■□□□□ 0.66
ARHGEF39-202ENST00000468876 SPAG9O60271 1321 aaKnown RBP19.17■□□□□ 0.66
ARHGEF39-202ENST00000468876 TNRQ92752 1358 aa19.16■□□□□ 0.66
ARHGEF39-202ENST00000468876 THEMISQ8N1K5 641 aaPredicted RBP19.15■□□□□ 0.66
ARHGEF39-202ENST00000468876 TRIM52Q96A61 297 aa19.15■□□□□ 0.66
ARHGEF39-202ENST00000468876 CDC42BPBQ9Y5S2 1711 aa19.14■□□□□ 0.66
ARHGEF39-202ENST00000468876 ZNF777Q9ULD5 760 aaPredicted RBP19.13■□□□□ 0.65
ARHGEF39-202ENST00000468876 SYNMO15061 1565 aa19.12■□□□□ 0.65
ARHGEF39-202ENST00000468876 FBXO31Q5XUX0 539 aaPredicted RBP19.12■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms