RNA–Protein interactions for RNA: ENST00000468693.5

HCLS1-204, Transcript of hematopoietic cell-specific Lyn substrate 1, humanhuman

TSL 3

Gene HCLS1, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCLS1-204ENST00000468693 UBAP1LF5GYI3 381 aa19.3■□□□□ 0.68
HCLS1-204ENST00000468693 MAGI2Q86UL8 1455 aa19.28■□□□□ 0.68
HCLS1-204ENST00000468693 P3H3Q8IVL6 736 aa19.28■□□□□ 0.68
HCLS1-204ENST00000468693 CFAP74Q9C0B2 1584 aa19.27■□□□□ 0.68
HCLS1-204ENST00000468693 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.27■□□□□ 0.68
HCLS1-204ENST00000468693 HNRNPUL2Q1KMD3 747 aaKnown RBP19.27■□□□□ 0.68
HCLS1-204ENST00000468693 RAPGEF6Q8TEU7 1601 aa19.22■□□□□ 0.67
HCLS1-204ENST00000468693 NCOA1Q15788 1441 aa19.22■□□□□ 0.67
HCLS1-204ENST00000468693 C9orf84Q5VXU9 1444 aa19.22■□□□□ 0.67
HCLS1-204ENST00000468693 ATP10AO60312 1499 aa19.22■□□□□ 0.67
HCLS1-204ENST00000468693 ZNF335Q9H4Z2 1342 aaPredicted RBP19.2■□□□□ 0.66
HCLS1-204ENST00000468693 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.2■□□□□ 0.66
HCLS1-204ENST00000468693 HSPA1LP34931 641 aa19.19■□□□□ 0.66
HCLS1-204ENST00000468693 FAM9AQ8IZU1 332 aaPredicted RBP19.19■□□□□ 0.66
HCLS1-204ENST00000468693 C3P01024 1663 aa19.18■□□□□ 0.66
HCLS1-204ENST00000468693 NUP153P49790 1475 aaKnown RBP19.17■□□□□ 0.66
HCLS1-204ENST00000468693 SETD1BQ9UPS6 1966 aaKnown RBP19.17■□□□□ 0.66
HCLS1-204ENST00000468693 SCAPERQ9BY12 1400 aa19.16■□□□□ 0.66
HCLS1-204ENST00000468693 PHF23Q9BUL5 403 aaPredicted RBP19.13■□□□□ 0.65
HCLS1-204ENST00000468693 CAMSAP1Q5T5Y3 1602 aa19.12■□□□□ 0.65
HCLS1-204ENST00000468693 SCAF1Q9H7N4 1312 aaKnown RBP19.12■□□□□ 0.65
HCLS1-204ENST00000468693 TRAPPC8Q9Y2L5 1435 aa19.09■□□□□ 0.65
HCLS1-204ENST00000468693 NCKAP5LQ9HCH0 1330 aa19.09■□□□□ 0.65
HCLS1-204ENST00000468693 PLEKHD1A6NEE1 506 aa19.09■□□□□ 0.65
HCLS1-204ENST00000468693 PIP4K2BP78356 416 aa19.09■□□□□ 0.65
HCLS1-204ENST00000468693 SAMD9Q5K651 1589 aa19.09■□□□□ 0.65
HCLS1-204ENST00000468693 PRXQ9BXM0 1461 aa19.04■□□□□ 0.64
HCLS1-204ENST00000468693 DIP2CQ9Y2E4 1556 aa19.02■□□□□ 0.64
HCLS1-204ENST00000468693 PLCH2O75038 1416 aa19.02■□□□□ 0.64
HCLS1-204ENST00000468693 ESF1Q9H501 851 aaKnown RBP18.98■□□□□ 0.63
HCLS1-204ENST00000468693 REREQ9P2R6 1566 aa18.98■□□□□ 0.63
HCLS1-204ENST00000468693 ABCA6Q8N139 1617 aa18.97■□□□□ 0.63
HCLS1-204ENST00000468693 KDM5CP41229 1560 aa18.97■□□□□ 0.63
HCLS1-204ENST00000468693 ZNF518AQ6AHZ1 1483 aa18.97■□□□□ 0.63
HCLS1-204ENST00000468693 AFAP1Q8N556 730 aa18.96■□□□□ 0.63
HCLS1-204ENST00000468693 TOM1O60784 492 aa18.95■□□□□ 0.62
HCLS1-204ENST00000468693 MYT1LQ9UL68 1186 aa18.95■□□□□ 0.62
HCLS1-204ENST00000468693 AGLP35573 1532 aa18.95■□□□□ 0.62
HCLS1-204ENST00000468693 TCOF1Q13428 1488 aaKnown RBP18.94■□□□□ 0.62
HCLS1-204ENST00000468693 NPATQ14207 1427 aa18.92■□□□□ 0.62
HCLS1-204ENST00000468693 PLA2R1Q13018 1463 aa18.92■□□□□ 0.62
HCLS1-204ENST00000468693 CDK13Q14004 1512 aaKnown RBP18.92■□□□□ 0.62
HCLS1-204ENST00000468693 PKD2Q13563 968 aa18.92■□□□□ 0.62
HCLS1-204ENST00000468693 RGS17Q9UGC6 210 aaPredicted RBP18.92■□□□□ 0.62
HCLS1-204ENST00000468693 EFCAB2Q5VUJ9 269 aa18.91■□□□□ 0.62
HCLS1-204ENST00000468693 SENP3Q9H4L4 574 aaPredicted RBP18.91■□□□□ 0.62
HCLS1-204ENST00000468693 PPP6R1Q9UPN7 881 aa18.91■□□□□ 0.62
HCLS1-204ENST00000468693 MYO5CQ9NQX4 1742 aa18.91■□□□□ 0.62
HCLS1-204ENST00000468693 CNTLNQ9NXG0 1405 aa18.91■□□□□ 0.62
HCLS1-204ENST00000468693 ALKQ9UM73 1620 aa18.9■□□□□ 0.62
HCLS1-204ENST00000468693 MYO3AQ8NEV4 1616 aa18.89■□□□□ 0.62
HCLS1-204ENST00000468693 ZNF142P52746 1687 aaPredicted RBP18.89■□□□□ 0.61
HCLS1-204ENST00000468693 SUPT6HQ7KZ85 1726 aaKnown RBP18.89■□□□□ 0.61
HCLS1-204ENST00000468693 RANGAP1P46060 587 aaPredicted RBP18.89■□□□□ 0.61
HCLS1-204ENST00000468693 CEP170BQ9Y4F5 1589 aaPredicted RBP18.87■□□□□ 0.61
HCLS1-204ENST00000468693 MROH2AA6NES4 1674 aa18.86■□□□□ 0.61
HCLS1-204ENST00000468693 CPS1P31327 1500 aa18.85■□□□□ 0.61
HCLS1-204ENST00000468693 MLH3Q9UHC1 1453 aa18.84■□□□□ 0.61
HCLS1-204ENST00000468693 ZMYM3Q14202 1370 aa18.84■□□□□ 0.61
HCLS1-204ENST00000468693 ARHGAP5Q13017 1502 aa18.83■□□□□ 0.6
HCLS1-204ENST00000468693 KIF14Q15058 1648 aa18.82■□□□□ 0.6
HCLS1-204ENST00000468693 SHANK2Q9UPX8 1470 aa18.82■□□□□ 0.6
HCLS1-204ENST00000468693 PTPRKQ15262 1439 aa18.8■□□□□ 0.6
HCLS1-204ENST00000468693 NEURL4Q96JN8 1562 aa18.77■□□□□ 0.6
HCLS1-204ENST00000468693 CLTCQ00610 1675 aaKnown RBP18.77■□□□□ 0.6
HCLS1-204ENST00000468693 KIDINS220Q9ULH0 1771 aa18.76■□□□□ 0.59
HCLS1-204ENST00000468693 POTEAQ6S8J7 498 aa18.76■□□□□ 0.59
HCLS1-204ENST00000468693 SETD1AO15047 1707 aaKnown RBP18.75■□□□□ 0.59
HCLS1-204ENST00000468693 POLR1AO95602 1720 aaPredicted RBP18.74■□□□□ 0.59
HCLS1-204ENST00000468693 VWDEQ8N2E2 1590 aa18.73■□□□□ 0.59
HCLS1-204ENST00000468693 DNMT1P26358 1616 aaKnown RBP18.73■□□□□ 0.59
HCLS1-204ENST00000468693 ABCC1P33527 1531 aa18.72■□□□□ 0.59
HCLS1-204ENST00000468693 ITSN2Q9NZM3 1697 aa18.71■□□□□ 0.59
HCLS1-204ENST00000468693 CDC42BPBQ9Y5S2 1711 aa18.7■□□□□ 0.58
HCLS1-204ENST00000468693 A2ML1A8K2U0 1454 aa18.7■□□□□ 0.58
HCLS1-204ENST00000468693 ATP1B4Q9UN42 357 aaPredicted RBP18.65■□□□□ 0.58
HCLS1-204ENST00000468693 RNF17Q9BXT8 1623 aaKnown RBP18.64■□□□□ 0.57
HCLS1-204ENST00000468693 TROQ12816 1431 aaPredicted RBP18.64■□□□□ 0.57
HCLS1-204ENST00000468693 LRRC7Q96NW7 1537 aa18.63■□□□□ 0.57
HCLS1-204ENST00000468693 PREX2Q70Z35 1606 aa18.63■□□□□ 0.57
HCLS1-204ENST00000468693 SAMD9LQ8IVG5 1584 aa18.62■□□□□ 0.57
HCLS1-204ENST00000468693 STRCP1A6NGW2 1772 aa18.62■□□□□ 0.57
HCLS1-204ENST00000468693 CSRNP3Q8WYN3 585 aa18.6■□□□□ 0.57
HCLS1-204ENST00000468693 CDK11AQ9UQ88 783 aaPredicted RBP18.6■□□□□ 0.57
HCLS1-204ENST00000468693 PLXNC1O60486 1568 aa18.59■□□□□ 0.57
HCLS1-204ENST00000468693 CLIP1P30622 1438 aa18.58■□□□□ 0.57
HCLS1-204ENST00000468693 GGT6Q6P531 493 aa18.58■□□□□ 0.56
HCLS1-204ENST00000468693 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.57■□□□□ 0.56
HCLS1-204ENST00000468693 NPHP4O75161 1426 aaPredicted RBP18.57■□□□□ 0.56
HCLS1-204ENST00000468693 SYNMO15061 1565 aa18.55■□□□□ 0.56
HCLS1-204ENST00000468693 ANKLE2Q86XL3 938 aa18.55■□□□□ 0.56
HCLS1-204ENST00000468693 UPF1Q92900 1129 aaKnown RBP eCLIP18.54■□□□□ 0.56
HCLS1-204ENST00000468693 SPAG9O60271 1321 aaKnown RBP18.53■□□□□ 0.56
HCLS1-204ENST00000468693 MED14O60244 1454 aa18.53■□□□□ 0.56
HCLS1-204ENST00000468693 A2MP01023 1474 aa18.53■□□□□ 0.56
HCLS1-204ENST00000468693 IQGAP1P46940 1657 aa18.53■□□□□ 0.56
HCLS1-204ENST00000468693 TNRQ92752 1358 aa18.53■□□□□ 0.56
HCLS1-204ENST00000468693 LRRIQ1Q96JM4 1722 aa18.52■□□□□ 0.56
HCLS1-204ENST00000468693 FBXO31Q5XUX0 539 aaPredicted RBP18.52■□□□□ 0.56
HCLS1-204ENST00000468693 ATP7AQ04656 1500 aa18.52■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms