RNA–Protein interactions for RNA: ENST00000467749.1

C4A-248, Transcript of complement C4A (Rodgers blood group), humanhuman

TSL 3

Gene C4A, Length 508 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C4A-248ENST00000467749 HECW1Q76N89 1606 aa13.56□□□□□ -0.24
C4A-248ENST00000467749 ARHGEF12Q9NZN5 1544 aa13.55□□□□□ -0.24
C4A-248ENST00000467749 PLEKHD1A6NEE1 506 aa13.54□□□□□ -0.24
C4A-248ENST00000467749 MLECQ14165 292 aa13.54□□□□□ -0.24
C4A-248ENST00000467749 DMRT2Q9Y5R5 561 aa13.54□□□□□ -0.24
C4A-248ENST00000467749 SETD1BQ9UPS6 1966 aaKnown RBP13.52□□□□□ -0.25
C4A-248ENST00000467749 ATP10AO60312 1499 aa13.5□□□□□ -0.25
C4A-248ENST00000467749 C9orf84Q5VXU9 1444 aa13.5□□□□□ -0.25
C4A-248ENST00000467749 UHRF1BP1Q6BDS2 1440 aa13.48□□□□□ -0.25
C4A-248ENST00000467749 SCAPERQ9BY12 1400 aa13.48□□□□□ -0.25
C4A-248ENST00000467749 MYO5CQ9NQX4 1742 aa13.47□□□□□ -0.25
C4A-248ENST00000467749 PTPRTO14522 1441 aa13.47□□□□□ -0.25
C4A-248ENST00000467749 CEBPAP49715 358 aaPredicted RBP13.46□□□□□ -0.25
C4A-248ENST00000467749 IQSEC2Q5JU85 1478 aa13.46□□□□□ -0.25
C4A-248ENST00000467749 PLCH2O75038 1416 aa13.46□□□□□ -0.26
C4A-248ENST00000467749 C3P01024 1663 aa13.44□□□□□ -0.26
C4A-248ENST00000467749 LTBP4Q8N2S1 1624 aa13.44□□□□□ -0.26
C4A-248ENST00000467749 ZNF518AQ6AHZ1 1483 aa13.42□□□□□ -0.26
C4A-248ENST00000467749 CDK13Q14004 1512 aaKnown RBP13.41□□□□□ -0.26
C4A-248ENST00000467749 CSRNP3Q8WYN3 585 aa13.41□□□□□ -0.26
C4A-248ENST00000467749 KDM5CP41229 1560 aa13.41□□□□□ -0.26
C4A-248ENST00000467749 REREQ9P2R6 1566 aa13.41□□□□□ -0.26
C4A-248ENST00000467749 RANGAP1P46060 587 aaPredicted RBP13.4□□□□□ -0.26
C4A-248ENST00000467749 DIP2CQ9Y2E4 1556 aa13.39□□□□□ -0.27
C4A-248ENST00000467749 EFCAB2Q5VUJ9 269 aa13.38□□□□□ -0.27
C4A-248ENST00000467749 ABCA6Q8N139 1617 aa13.37□□□□□ -0.27
C4A-248ENST00000467749 NCOA1Q15788 1441 aa13.37□□□□□ -0.27
C4A-248ENST00000467749 AGLP35573 1532 aa13.35□□□□□ -0.27
C4A-248ENST00000467749 TRAPPC8Q9Y2L5 1435 aa13.35□□□□□ -0.27
C4A-248ENST00000467749 KIF14Q15058 1648 aa13.35□□□□□ -0.27
C4A-248ENST00000467749 ARHGAP5Q13017 1502 aa13.34□□□□□ -0.27
C4A-248ENST00000467749 AFAP1Q8N556 730 aa13.33□□□□□ -0.28
C4A-248ENST00000467749 ESF1Q9H501 851 aaKnown RBP13.33□□□□□ -0.28
C4A-248ENST00000467749 CAMSAP1Q5T5Y3 1602 aa13.32□□□□□ -0.28
C4A-248ENST00000467749 EEA1Q15075 1411 aa13.32□□□□□ -0.28
C4A-248ENST00000467749 MROH2AA6NES4 1674 aa13.32□□□□□ -0.28
C4A-248ENST00000467749 MLH3Q9UHC1 1453 aa13.32□□□□□ -0.28
C4A-248ENST00000467749 MYT1LQ9UL68 1186 aa13.32□□□□□ -0.28
C4A-248ENST00000467749 CNTLNQ9NXG0 1405 aa13.31□□□□□ -0.28
C4A-248ENST00000467749 CDC42BPBQ9Y5S2 1711 aa13.31□□□□□ -0.28
C4A-248ENST00000467749 SUPT6HQ7KZ85 1726 aaKnown RBP13.3□□□□□ -0.28
C4A-248ENST00000467749 CDK11AQ9UQ88 783 aaPredicted RBP13.3□□□□□ -0.28
C4A-248ENST00000467749 ITSN2Q9NZM3 1697 aa13.29□□□□□ -0.28
C4A-248ENST00000467749 NPATQ14207 1427 aa13.29□□□□□ -0.28
C4A-248ENST00000467749 UBAP1LF5GYI3 381 aa13.28□□□□□ -0.28
C4A-248ENST00000467749 TROQ12816 1431 aaPredicted RBP13.28□□□□□ -0.28
C4A-248ENST00000467749 FMN1Q68DA7 1419 aa13.28□□□□□ -0.28
C4A-248ENST00000467749 ABCC1P33527 1531 aa13.28□□□□□ -0.28
C4A-248ENST00000467749 PREX2Q70Z35 1606 aa13.28□□□□□ -0.28
C4A-248ENST00000467749 ZNF142P52746 1687 aaPredicted RBP13.28□□□□□ -0.28
C4A-248ENST00000467749 KIDINS220Q9ULH0 1771 aa13.27□□□□□ -0.28
C4A-248ENST00000467749 CLIP1P30622 1438 aa13.27□□□□□ -0.29
C4A-248ENST00000467749 ZNF335Q9H4Z2 1342 aaPredicted RBP13.26□□□□□ -0.29
C4A-248ENST00000467749 LRRIQ1Q96JM4 1722 aa13.25□□□□□ -0.29
C4A-248ENST00000467749 MYO3AQ8NEV4 1616 aa13.25□□□□□ -0.29
C4A-248ENST00000467749 MED1Q15648 1581 aaPredicted RBP13.25□□□□□ -0.29
C4A-248ENST00000467749 PLA2R1Q13018 1463 aa13.25□□□□□ -0.29
C4A-248ENST00000467749 ATP1B4Q9UN42 357 aaPredicted RBP13.25□□□□□ -0.29
C4A-248ENST00000467749 NCKAP5LQ9HCH0 1330 aa13.23□□□□□ -0.29
C4A-248ENST00000467749 CLTCQ00610 1675 aaKnown RBP13.22□□□□□ -0.29
C4A-248ENST00000467749 CEP170BQ9Y4F5 1589 aaPredicted RBP13.22□□□□□ -0.29
C4A-248ENST00000467749 TCOF1Q13428 1488 aaKnown RBP13.22□□□□□ -0.29
C4A-248ENST00000467749 PKD2Q13563 968 aa13.21□□□□□ -0.29
C4A-248ENST00000467749 CDC42BPAQ5VT25 1732 aa13.21□□□□□ -0.3
C4A-248ENST00000467749 ZMYM3Q14202 1370 aa13.2□□□□□ -0.3
C4A-248ENST00000467749 ARHGAP35Q9NRY4 1499 aa13.19□□□□□ -0.3
C4A-248ENST00000467749 SAMD9LQ8IVG5 1584 aa13.19□□□□□ -0.3
C4A-248ENST00000467749 POLR1AO95602 1720 aaPredicted RBP13.17□□□□□ -0.3
C4A-248ENST00000467749 PTPRKQ15262 1439 aa13.16□□□□□ -0.3
C4A-248ENST00000467749 HSPA1LP34931 641 aa13.16□□□□□ -0.3
C4A-248ENST00000467749 PPP6R1Q9UPN7 881 aa13.16□□□□□ -0.3
C4A-248ENST00000467749 PLXNC1O60486 1568 aa13.15□□□□□ -0.3
C4A-248ENST00000467749 CPS1P31327 1500 aa13.15□□□□□ -0.3
C4A-248ENST00000467749 SCAF1Q9H7N4 1312 aaKnown RBP13.14□□□□□ -0.31
C4A-248ENST00000467749 TOM1O60784 492 aa13.14□□□□□ -0.31
C4A-248ENST00000467749 ATP7AQ04656 1500 aa13.13□□□□□ -0.31
C4A-248ENST00000467749 SYCP2Q9BX26 1530 aa13.13□□□□□ -0.31
C4A-248ENST00000467749 DNMT1P26358 1616 aaKnown RBP13.13□□□□□ -0.31
C4A-248ENST00000467749 INO80Q9ULG1 1556 aaPredicted RBP13.13□□□□□ -0.31
C4A-248ENST00000467749 CCDC18Q5T9S5 1454 aa13.13□□□□□ -0.31
C4A-248ENST00000467749 A2ML1A8K2U0 1454 aa13.12□□□□□ -0.31
C4A-248ENST00000467749 PIP4K2BP78356 416 aa13.12□□□□□ -0.31
C4A-248ENST00000467749 SPAG9O60271 1321 aaKnown RBP13.12□□□□□ -0.31
C4A-248ENST00000467749 A2MP01023 1474 aa13.11□□□□□ -0.31
C4A-248ENST00000467749 UBTFP17480 764 aaKnown RBP13.11□□□□□ -0.31
C4A-248ENST00000467749 ADGBQ8N7X0 1667 aa13.11□□□□□ -0.31
C4A-248ENST00000467749 NEURL4Q96JN8 1562 aa13.11□□□□□ -0.31
C4A-248ENST00000467749 PHF23Q9BUL5 403 aaPredicted RBP13.1□□□□□ -0.31
C4A-248ENST00000467749 SHANK2Q9UPX8 1470 aa13.1□□□□□ -0.31
C4A-248ENST00000467749 CASKIN1Q8WXD9 1431 aa13.08□□□□□ -0.32
C4A-248ENST00000467749 CHIC1Q5VXU3 224 aa13.08□□□□□ -0.32
C4A-248ENST00000467749 ZNF777Q9ULD5 760 aaPredicted RBP13.08□□□□□ -0.32
C4A-248ENST00000467749 PLEKHH2Q8IVE3 1493 aa13.07□□□□□ -0.32
C4A-248ENST00000467749 ALKQ9UM73 1620 aa13.06□□□□□ -0.32
C4A-248ENST00000467749 KIAA1107Q9UPP5 1409 aa13.06□□□□□ -0.32
C4A-248ENST00000467749 GGT6Q6P531 493 aa13.06□□□□□ -0.32
C4A-248ENST00000467749 GPATCH8Q9UKJ3 1502 aaKnown RBP13.06□□□□□ -0.32
C4A-248ENST00000467749 VWDEQ8N2E2 1590 aa13.06□□□□□ -0.32
C4A-248ENST00000467749 HNRNPMP52272 730 aaKnown RBP eCLIP13.05□□□□□ -0.32
C4A-248ENST00000467749 EHMT2Q96KQ7 1210 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms