RNA–Protein interactions for RNA: ENST00000466982.1

SFXN3-204, Transcript of sideroflexin 3, humanhuman

TSL 2

Gene SFXN3, Length 2,756 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN3-204ENST00000466982 TDRD9Q8NDG6 1382 aaKnown RBP14.79□□□□□ -0.04
SFXN3-204ENST00000466982 AQRO60306 1485 aaKnown RBP eCLIP14.79□□□□□ -0.04
SFXN3-204ENST00000466982 CCDC18Q5T9S5 1454 aa14.79□□□□□ -0.04
SFXN3-204ENST00000466982 AEBP2Q6ZN18 517 aaPredicted RBP14.78□□□□□ -0.04
SFXN3-204ENST00000466982 KLHL34Q8N239 644 aa14.78□□□□□ -0.04
SFXN3-204ENST00000466982 NCOA2Q15596 1464 aa14.77□□□□□ -0.04
SFXN3-204ENST00000466982 NUDCQ9Y266 331 aa14.77□□□□□ -0.05
SFXN3-204ENST00000466982 SMG6Q86US8 1419 aaKnown RBP14.77□□□□□ -0.05
SFXN3-204ENST00000466982 RNF123Q5XPI4 1314 aa14.76□□□□□ -0.05
SFXN3-204ENST00000466982 USP35Q9P2H5 1018 aa14.76□□□□□ -0.05
SFXN3-204ENST00000466982 PTPRKQ15262 1439 aa14.76□□□□□ -0.05
SFXN3-204ENST00000466982 UACAQ9BZF9 1416 aa14.75□□□□□ -0.05
SFXN3-204ENST00000466982 ABCA10Q8WWZ4 1543 aa14.74□□□□□ -0.05
SFXN3-204ENST00000466982 CCDC7Q96M83 1385 aa14.74□□□□□ -0.05
SFXN3-204ENST00000466982 PDE4AP27815 886 aa14.74□□□□□ -0.05
SFXN3-204ENST00000466982 IFT140Q96RY7 1462 aa14.72□□□□□ -0.05
SFXN3-204ENST00000466982 TAF7LQ5H9L4 462 aa14.72□□□□□ -0.05
SFXN3-204ENST00000466982 FAM43AQ8N2R8 423 aa14.72□□□□□ -0.05
SFXN3-204ENST00000466982 TARBP1Q13395 1621 aaKnown RBP14.72□□□□□ -0.05
SFXN3-204ENST00000466982 GSE1Q14687 1217 aa14.71□□□□□ -0.05
SFXN3-204ENST00000466982 ZNF608Q9ULD9 1512 aaPredicted RBP14.7□□□□□ -0.06
SFXN3-204ENST00000466982 SKAP1Q86WV1 359 aa14.7□□□□□ -0.06
SFXN3-204ENST00000466982 PCF11O94913 1555 aaKnown RBP14.7□□□□□ -0.06
SFXN3-204ENST00000466982 PPM1GO15355 546 aaPredicted RBP14.69□□□□□ -0.06
SFXN3-204ENST00000466982 EXOC6Q8TAG9 804 aa14.69□□□□□ -0.06
SFXN3-204ENST00000466982 NCOA1Q15788 1441 aa14.69□□□□□ -0.06
SFXN3-204ENST00000466982 FRAT1Q92837 279 aaPredicted RBP14.69□□□□□ -0.06
SFXN3-204ENST00000466982 BACH2Q9BYV9 841 aa14.69□□□□□ -0.06
SFXN3-204ENST00000466982 HFM1A2PYH4 1435 aa14.68□□□□□ -0.06
SFXN3-204ENST00000466982 RRP9O43818 475 aaKnown RBP14.68□□□□□ -0.06
SFXN3-204ENST00000466982 SLC4A3P48751 1232 aa14.68□□□□□ -0.06
SFXN3-204ENST00000466982 IGF1RP08069 1367 aa14.68□□□□□ -0.06
SFXN3-204ENST00000466982 HSP90AA2PQ14568 343 aaPredicted RBP14.68□□□□□ -0.06
SFXN3-204ENST00000466982 L3MBTL2Q969R5 705 aa14.68□□□□□ -0.06
SFXN3-204ENST00000466982 NCBP3Q53F19 620 aaKnown RBP14.68□□□□□ -0.06
SFXN3-204ENST00000466982 GAPVD1Q14C86 1478 aa14.68□□□□□ -0.06
SFXN3-204ENST00000466982 KIF7Q2M1P5 1343 aa14.67□□□□□ -0.06
SFXN3-204ENST00000466982 PTPN23Q9H3S7 1636 aa14.67□□□□□ -0.06
SFXN3-204ENST00000466982 NAIPQ13075 1403 aa14.67□□□□□ -0.06
SFXN3-204ENST00000466982 FGD6Q6ZV73 1430 aa14.67□□□□□ -0.06
SFXN3-204ENST00000466982 FOXD1Q16676 465 aa14.67□□□□□ -0.06
SFXN3-204ENST00000466982 CFAP43Q8NDM7 1665 aa14.66□□□□□ -0.06
SFXN3-204ENST00000466982 TCERG1O14776 1098 aaKnown RBP14.66□□□□□ -0.06
SFXN3-204ENST00000466982 NFKBIBQ15653 356 aa14.66□□□□□ -0.06
SFXN3-204ENST00000466982 RRP7BPQ9NSQ0 103 aa14.65□□□□□ -0.06
SFXN3-204ENST00000466982 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.65□□□□□ -0.06
SFXN3-204ENST00000466982 FHOD3Q2V2M9 1422 aa14.64□□□□□ -0.07
SFXN3-204ENST00000466982 NBPF8Q3BBV2 869 aa14.64□□□□□ -0.07
SFXN3-204ENST00000466982 POLR3GLQ9BT43 218 aa14.64□□□□□ -0.07
SFXN3-204ENST00000466982 CHIC2Q9UKJ5 165 aa14.63□□□□□ -0.07
SFXN3-204ENST00000466982 DENND4BO75064 1496 aaPredicted RBP14.62□□□□□ -0.07
SFXN3-204ENST00000466982 ABCA5Q8WWZ7 1642 aa14.62□□□□□ -0.07
SFXN3-204ENST00000466982 CARMIL1Q5VZK9 1371 aa14.62□□□□□ -0.07
SFXN3-204ENST00000466982 RRP1P56182 461 aaKnown RBP14.6□□□□□ -0.07
SFXN3-204ENST00000466982 FMN1Q68DA7 1419 aa14.59□□□□□ -0.07
SFXN3-204ENST00000466982 DCAF11Q8TEB1 546 aa14.59□□□□□ -0.07
SFXN3-204ENST00000466982 EIF4G3O43432 1585 aaKnown RBP14.59□□□□□ -0.07
SFXN3-204ENST00000466982 GRIN2BQ13224 1484 aa14.58□□□□□ -0.08
SFXN3-204ENST00000466982 ARXQ96QS3 562 aa14.58□□□□□ -0.08
SFXN3-204ENST00000466982 PNISRQ8TF01 805 aaKnown RBP14.57□□□□□ -0.08
SFXN3-204ENST00000466982 DHX29Q7Z478 1369 aaKnown RBP14.57□□□□□ -0.08
SFXN3-204ENST00000466982 FBLN2P98095 1184 aa14.56□□□□□ -0.08
SFXN3-204ENST00000466982 MS4A1P11836 297 aa14.56□□□□□ -0.08
SFXN3-204ENST00000466982 MTUS2Q5JR59 1369 aa14.55□□□□□ -0.08
SFXN3-204ENST00000466982 FRAT2O75474 233 aaPredicted RBP14.54□□□□□ -0.08
SFXN3-204ENST00000466982 MPHOSPH9Q99550 1183 aa14.54□□□□□ -0.08
SFXN3-204ENST00000466982 TMC1Q8TDI8 760 aa14.54□□□□□ -0.08
SFXN3-204ENST00000466982 PBRM1Q86U86 1689 aa14.54□□□□□ -0.08
SFXN3-204ENST00000466982 PLIN1O60240 522 aa14.53□□□□□ -0.08
SFXN3-204ENST00000466982 RCAN3Q9UKA8 241 aa14.53□□□□□ -0.08
SFXN3-204ENST00000466982 PRDM4Q9UKN5 801 aa14.53□□□□□ -0.08
SFXN3-204ENST00000466982 SPATA31E1Q6ZUB1 1445 aa14.53□□□□□ -0.08
SFXN3-204ENST00000466982 SNAPC4Q5SXM2 1469 aa14.53□□□□□ -0.08
SFXN3-204ENST00000466982 HSP90AA1P07900 732 aaKnown RBP14.53□□□□□ -0.08
SFXN3-204ENST00000466982 DDRGK1Q96HY6 314 aa14.53□□□□□ -0.08
SFXN3-204ENST00000466982 FYCO1Q9BQS8 1478 aa14.52□□□□□ -0.08
SFXN3-204ENST00000466982 CASKIN1Q8WXD9 1431 aa14.52□□□□□ -0.09
SFXN3-204ENST00000466982 KDM6BO15054 1643 aa14.51□□□□□ -0.09
SFXN3-204ENST00000466982 CHMP7Q8WUX9 453 aaPredicted RBP14.51□□□□□ -0.09
SFXN3-204ENST00000466982 CUL7Q14999 1698 aa14.5□□□□□ -0.09
SFXN3-204ENST00000466982 CALD1Q05682 793 aaKnown RBP14.48□□□□□ -0.09
SFXN3-204ENST00000466982 CDCA7LQ96GN5 454 aa14.48□□□□□ -0.09
SFXN3-204ENST00000466982 NAP1L2Q9ULW6 460 aaPredicted RBP14.47□□□□□ -0.09
SFXN3-204ENST00000466982 MYOM3Q5VTT5 1437 aa14.47□□□□□ -0.09
SFXN3-204ENST00000466982 RRAGDQ9NQL2 400 aaPredicted RBP14.46□□□□□ -0.09
SFXN3-204ENST00000466982 ADAMTS12P58397 1594 aa14.46□□□□□ -0.1
SFXN3-204ENST00000466982 ZNF326Q5BKZ1 582 aaKnown RBP14.45□□□□□ -0.1
SFXN3-204ENST00000466982 MAGI1Q96QZ7 1491 aaPredicted RBP14.45□□□□□ -0.1
SFXN3-204ENST00000466982 PAXIP1Q6ZW49 1069 aaPredicted RBP14.45□□□□□ -0.1
SFXN3-204ENST00000466982 CRBNQ96SW2 442 aa14.45□□□□□ -0.1
SFXN3-204ENST00000466982 RSPH4AQ5TD94 716 aa14.44□□□□□ -0.1
SFXN3-204ENST00000466982 HECW1Q76N89 1606 aa14.43□□□□□ -0.1
SFXN3-204ENST00000466982 BBXQ8WY36 941 aaPredicted RBP14.43□□□□□ -0.1
SFXN3-204ENST00000466982 BCORL1Q5H9F3 1711 aa14.42□□□□□ -0.1
SFXN3-204ENST00000466982 RGS3P49796 1198 aa14.42□□□□□ -0.1
SFXN3-204ENST00000466982 SYNJ2O15056 1496 aa14.42□□□□□ -0.1
SFXN3-204ENST00000466982 TEX14Q8IWB6 1497 aa14.42□□□□□ -0.1
SFXN3-204ENST00000466982 POLR1AO95602 1720 aaPredicted RBP14.42□□□□□ -0.1
SFXN3-204ENST00000466982 CENPJQ9HC77 1338 aaPredicted RBP14.42□□□□□ -0.1
SFXN3-204ENST00000466982 LRPPRCP42704 1394 aaKnown RBP14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms