RNA–Protein interactions for RNA: ENST00000465672.1

RETREG2-209, Transcript of reticulophagy regulator family member 2, humanhuman

TSL 4

Gene RETREG2, Length 550 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG2-209ENST00000465672 CDK13Q14004 1512 aaKnown RBP25.93■■□□□ 1.74
RETREG2-209ENST00000465672 PREX1Q8TCU6 1659 aa25.91■■□□□ 1.74
RETREG2-209ENST00000465672 CEBPAP49715 358 aaPredicted RBP25.9■■□□□ 1.74
RETREG2-209ENST00000465672 ATP10AO60312 1499 aa25.89■■□□□ 1.73
RETREG2-209ENST00000465672 PLCH2O75038 1416 aa25.88■■□□□ 1.73
RETREG2-209ENST00000465672 ARHGEF12Q9NZN5 1544 aa25.88■■□□□ 1.73
RETREG2-209ENST00000465672 DISP3Q9P2K9 1392 aa25.85■■□□□ 1.73
RETREG2-209ENST00000465672 ATP1B4Q9UN42 357 aaPredicted RBP25.85■■□□□ 1.73
RETREG2-209ENST00000465672 C9orf84Q5VXU9 1444 aa25.85■■□□□ 1.73
RETREG2-209ENST00000465672 EEA1Q15075 1411 aa25.84■■□□□ 1.73
RETREG2-209ENST00000465672 MYO5CQ9NQX4 1742 aa25.84■■□□□ 1.73
RETREG2-209ENST00000465672 STRCQ7RTU9 1775 aa25.84■■□□□ 1.73
RETREG2-209ENST00000465672 EFCAB2Q5VUJ9 269 aa25.82■■□□□ 1.72
RETREG2-209ENST00000465672 ILDR2Q71H61 639 aa25.82■■□□□ 1.72
RETREG2-209ENST00000465672 SETD1BQ9UPS6 1966 aaKnown RBP25.8■■□□□ 1.72
RETREG2-209ENST00000465672 DMRT2Q9Y5R5 561 aa25.8■■□□□ 1.72
RETREG2-209ENST00000465672 MYT1LQ9UL68 1186 aa25.79■■□□□ 1.72
RETREG2-209ENST00000465672 UHRF1BP1Q6BDS2 1440 aa25.76■■□□□ 1.71
RETREG2-209ENST00000465672 AFAP1Q8N556 730 aa25.74■■□□□ 1.71
RETREG2-209ENST00000465672 EHMT2Q96KQ7 1210 aa25.74■■□□□ 1.71
RETREG2-209ENST00000465672 KIF14Q15058 1648 aa25.74■■□□□ 1.71
RETREG2-209ENST00000465672 ZNF518AQ6AHZ1 1483 aa25.72■■□□□ 1.71
RETREG2-209ENST00000465672 SOCS7O14512 581 aa25.72■■□□□ 1.71
RETREG2-209ENST00000465672 CDK11AQ9UQ88 783 aaPredicted RBP25.71■■□□□ 1.71
RETREG2-209ENST00000465672 ARHGAP5Q13017 1502 aa25.71■■□□□ 1.71
RETREG2-209ENST00000465672 KDM5CP41229 1560 aa25.68■■□□□ 1.7
RETREG2-209ENST00000465672 C3P01024 1663 aa25.68■■□□□ 1.7
RETREG2-209ENST00000465672 FMN1Q68DA7 1419 aa25.67■■□□□ 1.7
RETREG2-209ENST00000465672 DIP2CQ9Y2E4 1556 aa25.67■■□□□ 1.7
RETREG2-209ENST00000465672 UBTFP17480 764 aaKnown RBP25.65■■□□□ 1.7
RETREG2-209ENST00000465672 ESF1Q9H501 851 aaKnown RBP25.64■■□□□ 1.7
RETREG2-209ENST00000465672 SPATA31D1Q6ZQQ2 1576 aa25.63■■□□□ 1.69
RETREG2-209ENST00000465672 ABCA6Q8N139 1617 aa25.63■■□□□ 1.69
RETREG2-209ENST00000465672 PTPRTO14522 1441 aa25.63■■□□□ 1.69
RETREG2-209ENST00000465672 TROQ12816 1431 aaPredicted RBP25.63■■□□□ 1.69
RETREG2-209ENST00000465672 CDC42BPBQ9Y5S2 1711 aa25.61■■□□□ 1.69
RETREG2-209ENST00000465672 CLIP1P30622 1438 aa25.61■■□□□ 1.69
RETREG2-209ENST00000465672 REREQ9P2R6 1566 aa25.6■■□□□ 1.69
RETREG2-209ENST00000465672 LRRIQ1Q96JM4 1722 aa25.6■■□□□ 1.69
RETREG2-209ENST00000465672 ARHGAP35Q9NRY4 1499 aa25.6■■□□□ 1.69
RETREG2-209ENST00000465672 MLH3Q9UHC1 1453 aa25.56■■□□□ 1.68
RETREG2-209ENST00000465672 LTBP4Q8N2S1 1624 aa25.55■■□□□ 1.68
RETREG2-209ENST00000465672 TRAPPC8Q9Y2L5 1435 aa25.55■■□□□ 1.68
RETREG2-209ENST00000465672 AGLP35573 1532 aa25.53■■□□□ 1.68
RETREG2-209ENST00000465672 ITSN2Q9NZM3 1697 aa25.52■■□□□ 1.68
RETREG2-209ENST00000465672 PREX2Q70Z35 1606 aa25.51■■□□□ 1.67
RETREG2-209ENST00000465672 ABCC1P33527 1531 aa25.5■■□□□ 1.67
RETREG2-209ENST00000465672 NCOA1Q15788 1441 aa25.5■■□□□ 1.67
RETREG2-209ENST00000465672 KIDINS220Q9ULH0 1771 aa25.49■■□□□ 1.67
RETREG2-209ENST00000465672 IQSEC2Q5JU85 1478 aa25.47■■□□□ 1.67
RETREG2-209ENST00000465672 CNTLNQ9NXG0 1405 aa25.46■■□□□ 1.67
RETREG2-209ENST00000465672 CAMSAP1Q5T5Y3 1602 aa25.46■■□□□ 1.67
RETREG2-209ENST00000465672 CDC42BPAQ5VT25 1732 aa25.43■■□□□ 1.66
RETREG2-209ENST00000465672 NCKAP5LQ9HCH0 1330 aa25.41■■□□□ 1.66
RETREG2-209ENST00000465672 MROH2AA6NES4 1674 aa25.41■■□□□ 1.66
RETREG2-209ENST00000465672 SUPT6HQ7KZ85 1726 aaKnown RBP25.4■■□□□ 1.66
RETREG2-209ENST00000465672 ZNF777Q9ULD5 760 aaPredicted RBP25.4■■□□□ 1.66
RETREG2-209ENST00000465672 ZMYM3Q14202 1370 aa25.39■■□□□ 1.65
RETREG2-209ENST00000465672 ZNF335Q9H4Z2 1342 aaPredicted RBP25.38■■□□□ 1.65
RETREG2-209ENST00000465672 NPATQ14207 1427 aa25.38■■□□□ 1.65
RETREG2-209ENST00000465672 UBAP1LF5GYI3 381 aa25.38■■□□□ 1.65
RETREG2-209ENST00000465672 SAMD9LQ8IVG5 1584 aa25.37■■□□□ 1.65
RETREG2-209ENST00000465672 CCDC18Q5T9S5 1454 aa25.36■■□□□ 1.65
RETREG2-209ENST00000465672 CLTCQ00610 1675 aaKnown RBP25.35■■□□□ 1.65
RETREG2-209ENST00000465672 CASKIN1Q8WXD9 1431 aa25.33■■□□□ 1.65
RETREG2-209ENST00000465672 SPAG9O60271 1321 aaKnown RBP25.33■■□□□ 1.64
RETREG2-209ENST00000465672 HNRNPMP52272 730 aaKnown RBP eCLIP25.32■■□□□ 1.64
RETREG2-209ENST00000465672 SYCP2Q9BX26 1530 aa25.32■■□□□ 1.64
RETREG2-209ENST00000465672 MYO3AQ8NEV4 1616 aa25.3■■□□□ 1.64
RETREG2-209ENST00000465672 ZNF142P52746 1687 aaPredicted RBP25.29■■□□□ 1.64
RETREG2-209ENST00000465672 PKD2Q13563 968 aa25.28■■□□□ 1.64
RETREG2-209ENST00000465672 GGT6Q6P531 493 aa25.26■■□□□ 1.63
RETREG2-209ENST00000465672 ATP7AQ04656 1500 aa25.26■■□□□ 1.63
RETREG2-209ENST00000465672 CEP170BQ9Y4F5 1589 aaPredicted RBP25.26■■□□□ 1.63
RETREG2-209ENST00000465672 PLA2R1Q13018 1463 aa25.25■■□□□ 1.63
RETREG2-209ENST00000465672 GPATCH8Q9UKJ3 1502 aaKnown RBP25.24■■□□□ 1.63
RETREG2-209ENST00000465672 PTPRKQ15262 1439 aa25.23■■□□□ 1.63
RETREG2-209ENST00000465672 A2MP01023 1474 aa25.22■■□□□ 1.63
RETREG2-209ENST00000465672 TCOF1Q13428 1488 aaKnown RBP25.21■■□□□ 1.63
RETREG2-209ENST00000465672 PPP6R1Q9UPN7 881 aa25.21■■□□□ 1.63
RETREG2-209ENST00000465672 PLXNC1O60486 1568 aa25.21■■□□□ 1.63
RETREG2-209ENST00000465672 SCAF1Q9H7N4 1312 aaKnown RBP25.2■■□□□ 1.62
RETREG2-209ENST00000465672 INO80Q9ULG1 1556 aaPredicted RBP25.2■■□□□ 1.62
RETREG2-209ENST00000465672 CFDP1Q9UEE9 299 aaPredicted RBP25.19■■□□□ 1.62
RETREG2-209ENST00000465672 FYCO1Q9BQS8 1478 aa25.19■■□□□ 1.62
RETREG2-209ENST00000465672 KIAA1107Q9UPP5 1409 aa25.16■■□□□ 1.62
RETREG2-209ENST00000465672 PLEKHH2Q8IVE3 1493 aa25.15■■□□□ 1.62
RETREG2-209ENST00000465672 PIP4K2BP78356 416 aa25.15■■□□□ 1.62
RETREG2-209ENST00000465672 ADGBQ8N7X0 1667 aa25.14■■□□□ 1.62
RETREG2-209ENST00000465672 HSPA1LP34931 641 aa25.14■■□□□ 1.62
RETREG2-209ENST00000465672 CHIC1Q5VXU3 224 aa25.14■■□□□ 1.62
RETREG2-209ENST00000465672 CCNB3Q8WWL7 1395 aa25.13■■□□□ 1.61
RETREG2-209ENST00000465672 DNMT1P26358 1616 aaKnown RBP25.12■■□□□ 1.61
RETREG2-209ENST00000465672 A2ML1A8K2U0 1454 aa25.11■■□□□ 1.61
RETREG2-209ENST00000465672 POLR1AO95602 1720 aaPredicted RBP25.1■■□□□ 1.61
RETREG2-209ENST00000465672 MED1Q15648 1581 aaPredicted RBP25.1■■□□□ 1.61
RETREG2-209ENST00000465672 TOM1O60784 492 aa25.08■■□□□ 1.61
RETREG2-209ENST00000465672 ZNF644Q9H582 1327 aaPredicted RBP25.07■■□□□ 1.6
RETREG2-209ENST00000465672 CPS1P31327 1500 aa25.04■■□□□ 1.6
RETREG2-209ENST00000465672 FBXO31Q5XUX0 539 aaPredicted RBP25.04■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms