RNA–Protein interactions for RNA: ENST00000465223.1

NCSTN-210, Transcript of nicastrin, humanhuman

TSL 2

Gene NCSTN, Length 545 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCSTN-210ENST00000465223 HECW1Q76N89 1606 aa26.14■■□□□ 1.78
NCSTN-210ENST00000465223 ARHGEF12Q9NZN5 1544 aa26.14■■□□□ 1.77
NCSTN-210ENST00000465223 NUP153P49790 1475 aaKnown RBP26.13■■□□□ 1.77
NCSTN-210ENST00000465223 SAMD9Q5K651 1589 aa26.12■■□□□ 1.77
NCSTN-210ENST00000465223 MAGI2Q86UL8 1455 aa26.11■■□□□ 1.77
NCSTN-210ENST00000465223 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP26.1■■□□□ 1.77
NCSTN-210ENST00000465223 PLEKHD1A6NEE1 506 aa26.06■■□□□ 1.76
NCSTN-210ENST00000465223 LTBP4Q8N2S1 1624 aa26.05■■□□□ 1.76
NCSTN-210ENST00000465223 UHRF1BP1Q6BDS2 1440 aa26.05■■□□□ 1.76
NCSTN-210ENST00000465223 PTPRTO14522 1441 aa26.03■■□□□ 1.76
NCSTN-210ENST00000465223 ATP10AO60312 1499 aa26.02■■□□□ 1.76
NCSTN-210ENST00000465223 C9orf84Q5VXU9 1444 aa26■■□□□ 1.75
NCSTN-210ENST00000465223 SCAPERQ9BY12 1400 aa26■■□□□ 1.75
NCSTN-210ENST00000465223 SETD1BQ9UPS6 1966 aaKnown RBP25.99■■□□□ 1.75
NCSTN-210ENST00000465223 IQSEC2Q5JU85 1478 aa25.95■■□□□ 1.74
NCSTN-210ENST00000465223 RANGAP1P46060 587 aaPredicted RBP25.93■■□□□ 1.74
NCSTN-210ENST00000465223 C3P01024 1663 aa25.9■■□□□ 1.74
NCSTN-210ENST00000465223 PLCH2O75038 1416 aa25.88■■□□□ 1.73
NCSTN-210ENST00000465223 NCOA1Q15788 1441 aa25.83■■□□□ 1.73
NCSTN-210ENST00000465223 CDK13Q14004 1512 aaKnown RBP25.83■■□□□ 1.72
NCSTN-210ENST00000465223 UBAP1LF5GYI3 381 aa25.82■■□□□ 1.72
NCSTN-210ENST00000465223 DIP2CQ9Y2E4 1556 aa25.78■■□□□ 1.72
NCSTN-210ENST00000465223 MYO5CQ9NQX4 1742 aa25.78■■□□□ 1.72
NCSTN-210ENST00000465223 EFCAB2Q5VUJ9 269 aa25.77■■□□□ 1.72
NCSTN-210ENST00000465223 AFAP1Q8N556 730 aa25.77■■□□□ 1.72
NCSTN-210ENST00000465223 TRAPPC8Q9Y2L5 1435 aa25.77■■□□□ 1.72
NCSTN-210ENST00000465223 MYT1LQ9UL68 1186 aa25.76■■□□□ 1.71
NCSTN-210ENST00000465223 ZNF335Q9H4Z2 1342 aaPredicted RBP25.76■■□□□ 1.71
NCSTN-210ENST00000465223 ZNF518AQ6AHZ1 1483 aa25.75■■□□□ 1.71
NCSTN-210ENST00000465223 CAMSAP1Q5T5Y3 1602 aa25.74■■□□□ 1.71
NCSTN-210ENST00000465223 KDM5CP41229 1560 aa25.74■■□□□ 1.71
NCSTN-210ENST00000465223 ABCA6Q8N139 1617 aa25.72■■□□□ 1.71
NCSTN-210ENST00000465223 MED1Q15648 1581 aaPredicted RBP25.72■■□□□ 1.71
NCSTN-210ENST00000465223 NCKAP5LQ9HCH0 1330 aa25.71■■□□□ 1.71
NCSTN-210ENST00000465223 REREQ9P2R6 1566 aa25.71■■□□□ 1.71
NCSTN-210ENST00000465223 CSRNP3Q8WYN3 585 aa25.71■■□□□ 1.71
NCSTN-210ENST00000465223 ESF1Q9H501 851 aaKnown RBP25.71■■□□□ 1.71
NCSTN-210ENST00000465223 KIF14Q15058 1648 aa25.66■■□□□ 1.7
NCSTN-210ENST00000465223 AGLP35573 1532 aa25.64■■□□□ 1.7
NCSTN-210ENST00000465223 ARHGAP5Q13017 1502 aa25.64■■□□□ 1.7
NCSTN-210ENST00000465223 HSPA1LP34931 641 aa25.64■■□□□ 1.7
NCSTN-210ENST00000465223 MLH3Q9UHC1 1453 aa25.6■■□□□ 1.69
NCSTN-210ENST00000465223 SCAF1Q9H7N4 1312 aaKnown RBP25.6■■□□□ 1.69
NCSTN-210ENST00000465223 ATP1B4Q9UN42 357 aaPredicted RBP25.59■■□□□ 1.69
NCSTN-210ENST00000465223 CNTLNQ9NXG0 1405 aa25.59■■□□□ 1.69
NCSTN-210ENST00000465223 NPATQ14207 1427 aa25.56■■□□□ 1.68
NCSTN-210ENST00000465223 PIP4K2BP78356 416 aa25.56■■□□□ 1.68
NCSTN-210ENST00000465223 SUPT6HQ7KZ85 1726 aaKnown RBP25.55■■□□□ 1.68
NCSTN-210ENST00000465223 CDC42BPBQ9Y5S2 1711 aa25.54■■□□□ 1.68
NCSTN-210ENST00000465223 MROH2AA6NES4 1674 aa25.54■■□□□ 1.68
NCSTN-210ENST00000465223 KIDINS220Q9ULH0 1771 aa25.53■■□□□ 1.68
NCSTN-210ENST00000465223 PKD2Q13563 968 aa25.52■■□□□ 1.68
NCSTN-210ENST00000465223 ZMYM3Q14202 1370 aa25.52■■□□□ 1.68
NCSTN-210ENST00000465223 PLA2R1Q13018 1463 aa25.51■■□□□ 1.67
NCSTN-210ENST00000465223 MYO3AQ8NEV4 1616 aa25.51■■□□□ 1.67
NCSTN-210ENST00000465223 ZNF142P52746 1687 aaPredicted RBP25.5■■□□□ 1.67
NCSTN-210ENST00000465223 TCOF1Q13428 1488 aaKnown RBP25.5■■□□□ 1.67
NCSTN-210ENST00000465223 PHF23Q9BUL5 403 aaPredicted RBP25.5■■□□□ 1.67
NCSTN-210ENST00000465223 ITSN2Q9NZM3 1697 aa25.49■■□□□ 1.67
NCSTN-210ENST00000465223 CDK11AQ9UQ88 783 aaPredicted RBP25.49■■□□□ 1.67
NCSTN-210ENST00000465223 TROQ12816 1431 aaPredicted RBP25.48■■□□□ 1.67
NCSTN-210ENST00000465223 PPP6R1Q9UPN7 881 aa25.48■■□□□ 1.67
NCSTN-210ENST00000465223 ABCC1P33527 1531 aa25.47■■□□□ 1.67
NCSTN-210ENST00000465223 CEP170BQ9Y4F5 1589 aaPredicted RBP25.46■■□□□ 1.67
NCSTN-210ENST00000465223 CLTCQ00610 1675 aaKnown RBP25.45■■□□□ 1.66
NCSTN-210ENST00000465223 TOM1O60784 492 aa25.43■■□□□ 1.66
NCSTN-210ENST00000465223 CLIP1P30622 1438 aa25.42■■□□□ 1.66
NCSTN-210ENST00000465223 PREX2Q70Z35 1606 aa25.41■■□□□ 1.66
NCSTN-210ENST00000465223 LRRIQ1Q96JM4 1722 aa25.41■■□□□ 1.66
NCSTN-210ENST00000465223 PTPRKQ15262 1439 aa25.39■■□□□ 1.66
NCSTN-210ENST00000465223 FMN1Q68DA7 1419 aa25.38■■□□□ 1.65
NCSTN-210ENST00000465223 CPS1P31327 1500 aa25.35■■□□□ 1.65
NCSTN-210ENST00000465223 SAMD9LQ8IVG5 1584 aa25.35■■□□□ 1.65
NCSTN-210ENST00000465223 EEA1Q15075 1411 aa25.34■■□□□ 1.65
NCSTN-210ENST00000465223 SENP3Q9H4L4 574 aaPredicted RBP25.33■■□□□ 1.65
NCSTN-210ENST00000465223 ALKQ9UM73 1620 aa25.33■■□□□ 1.65
NCSTN-210ENST00000465223 SHANK2Q9UPX8 1470 aa25.32■■□□□ 1.64
NCSTN-210ENST00000465223 DNMT1P26358 1616 aaKnown RBP25.31■■□□□ 1.64
NCSTN-210ENST00000465223 ARHGAP35Q9NRY4 1499 aa25.3■■□□□ 1.64
NCSTN-210ENST00000465223 POLR1AO95602 1720 aaPredicted RBP25.3■■□□□ 1.64
NCSTN-210ENST00000465223 CDC42BPAQ5VT25 1732 aa25.3■■□□□ 1.64
NCSTN-210ENST00000465223 NEURL4Q96JN8 1562 aa25.3■■□□□ 1.64
NCSTN-210ENST00000465223 A2ML1A8K2U0 1454 aa25.28■■□□□ 1.64
NCSTN-210ENST00000465223 GGT6Q6P531 493 aa25.27■■□□□ 1.64
NCSTN-210ENST00000465223 EHMT2Q96KQ7 1210 aa25.27■■□□□ 1.64
NCSTN-210ENST00000465223 ZNF777Q9ULD5 760 aaPredicted RBP25.25■■□□□ 1.63
NCSTN-210ENST00000465223 SPAG9O60271 1321 aaKnown RBP25.25■■□□□ 1.63
NCSTN-210ENST00000465223 PLXNC1O60486 1568 aa25.25■■□□□ 1.63
NCSTN-210ENST00000465223 SYCP2Q9BX26 1530 aa25.24■■□□□ 1.63
NCSTN-210ENST00000465223 RGS17Q9UGC6 210 aaPredicted RBP25.24■■□□□ 1.63
NCSTN-210ENST00000465223 VWDEQ8N2E2 1590 aa25.22■■□□□ 1.63
NCSTN-210ENST00000465223 HNRNPMP52272 730 aaKnown RBP eCLIP25.22■■□□□ 1.63
NCSTN-210ENST00000465223 ATP7AQ04656 1500 aa25.22■■□□□ 1.63
NCSTN-210ENST00000465223 A2MP01023 1474 aa25.21■■□□□ 1.63
NCSTN-210ENST00000465223 INO80Q9ULG1 1556 aaPredicted RBP25.18■■□□□ 1.62
NCSTN-210ENST00000465223 UBTFP17480 764 aaKnown RBP25.17■■□□□ 1.62
NCSTN-210ENST00000465223 FBXO31Q5XUX0 539 aaPredicted RBP25.12■■□□□ 1.61
NCSTN-210ENST00000465223 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.12■■□□□ 1.61
NCSTN-210ENST00000465223 STRCP1A6NGW2 1772 aa25.12■■□□□ 1.61
NCSTN-210ENST00000465223 TNRQ92752 1358 aa25.11■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms