RNA–Protein interactions for RNA: ENST00000465167.1

SSBP1-204, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 5

Gene SSBP1, Length 517 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-204ENST00000465167 PSEN1P49768 467 aa10.31□□□□□ -0.76
SSBP1-204ENST00000465167 MAP3K13O43283 966 aa10.3□□□□□ -0.76
SSBP1-204ENST00000465167 IFNL1Q8IU54 200 aa10.3□□□□□ -0.76
SSBP1-204ENST00000465167 SNAPC4Q5SXM2 1469 aa10.3□□□□□ -0.76
SSBP1-204ENST00000465167 TDRD9Q8NDG6 1382 aaKnown RBP10.29□□□□□ -0.76
SSBP1-204ENST00000465167 CUX1P39880 1505 aa10.29□□□□□ -0.76
SSBP1-204ENST00000465167 SUPT5HO00267 1087 aaKnown RBP10.29□□□□□ -0.76
SSBP1-204ENST00000465167 SYNJ1O43426 1573 aa10.29□□□□□ -0.76
SSBP1-204ENST00000465167 ZRANB1Q9UGI0 708 aa10.28□□□□□ -0.76
SSBP1-204ENST00000465167 GRIN2BQ13224 1484 aa10.28□□□□□ -0.76
SSBP1-204ENST00000465167 MAGI1Q96QZ7 1491 aaPredicted RBP10.28□□□□□ -0.76
SSBP1-204ENST00000465167 PBRM1Q86U86 1689 aa10.28□□□□□ -0.76
SSBP1-204ENST00000465167 CD44P16070 742 aaKnown RBP10.27□□□□□ -0.77
SSBP1-204ENST00000465167 CHMP7Q8WUX9 453 aaPredicted RBP10.27□□□□□ -0.77
SSBP1-204ENST00000465167 CYB5RLQ6IPT4 315 aa10.26□□□□□ -0.77
SSBP1-204ENST00000465167 SYNJ2O15056 1496 aa10.23□□□□□ -0.77
SSBP1-204ENST00000465167 GAPVD1Q14C86 1478 aa10.23□□□□□ -0.77
SSBP1-204ENST00000465167 ARAP1Q96P48 1450 aa10.23□□□□□ -0.77
SSBP1-204ENST00000465167 PHF12Q96QT6 1004 aa10.22□□□□□ -0.77
SSBP1-204ENST00000465167 POTEHQ6S545 545 aa10.21□□□□□ -0.77
SSBP1-204ENST00000465167 MFRPQ9BY79 579 aa10.21□□□□□ -0.77
SSBP1-204ENST00000465167 CLASP1Q7Z460 1538 aa10.21□□□□□ -0.78
SSBP1-204ENST00000465167 ABCA10Q8WWZ4 1543 aa10.2□□□□□ -0.78
SSBP1-204ENST00000465167 ABCA5Q8WWZ7 1642 aa10.2□□□□□ -0.78
SSBP1-204ENST00000465167 WRNQ14191 1432 aaPredicted RBP eCLIP10.19□□□□□ -0.781e-7■□□□□ 10.2
SSBP1-204ENST00000465167 C19orf67A6NJJ6 358 aa10.19□□□□□ -0.78
SSBP1-204ENST00000465167 BIVM-ERCC5R4GMW8 1640 aa10.18□□□□□ -0.78
SSBP1-204ENST00000465167 EFCAB3Q8N7B9 438 aa10.17□□□□□ -0.78
SSBP1-204ENST00000465167 CABP2Q9NPB3 220 aa10.17□□□□□ -0.78
SSBP1-204ENST00000465167 TOP2BQ02880 1626 aa10.16□□□□□ -0.78
SSBP1-204ENST00000465167 SOX12O15370 315 aa10.15□□□□□ -0.78
SSBP1-204ENST00000465167 FBXO22Q8NEZ5 403 aa10.14□□□□□ -0.79
SSBP1-204ENST00000465167 ADAMTS12P58397 1594 aa10.14□□□□□ -0.79
SSBP1-204ENST00000465167 NLRP6P59044 892 aa10.13□□□□□ -0.79
SSBP1-204ENST00000465167 GRIN2AQ12879 1464 aa10.12□□□□□ -0.79
SSBP1-204ENST00000465167 CADPS2Q86UW7 1296 aa10.12□□□□□ -0.79
SSBP1-204ENST00000465167 MS4A3Q96HJ5 214 aa10.12□□□□□ -0.79
SSBP1-204ENST00000465167 PHF8Q9UPP1 1060 aa10.12□□□□□ -0.79
SSBP1-204ENST00000465167 FHAD1B1AJZ9 1412 aa10.1□□□□□ -0.79
SSBP1-204ENST00000465167 PPP1R37O75864 691 aa10.1□□□□□ -0.79
SSBP1-204ENST00000465167 NBR1Q14596 966 aa10.1□□□□□ -0.79
SSBP1-204ENST00000465167 TRPC6Q9Y210 931 aa10.1□□□□□ -0.79
SSBP1-204ENST00000465167 ERICH3Q5RHP9 1530 aa10.1□□□□□ -0.79
SSBP1-204ENST00000465167 PRKCSHP14314 528 aaPredicted RBP10.09□□□□□ -0.79
SSBP1-204ENST00000465167 TMEM106CQ9BVX2 250 aa10.09□□□□□ -0.79
SSBP1-204ENST00000465167 CEP170Q5SW79 1584 aa10.07□□□□□ -0.8
SSBP1-204ENST00000465167 NUP160Q12769 1436 aa10.07□□□□□ -0.8
SSBP1-204ENST00000465167 MS4A4AQ96JQ5 239 aa10.04□□□□□ -0.8
SSBP1-204ENST00000465167 SHROOM2Q13796 1616 aa10.04□□□□□ -0.8
SSBP1-204ENST00000465167 TIE1P35590 1138 aa10.03□□□□□ -0.8
SSBP1-204ENST00000465167 GOLGA2Q08379 1002 aa10.03□□□□□ -0.8
SSBP1-204ENST00000465167 TPRNQ4KMQ1 711 aa10.03□□□□□ -0.8
SSBP1-204ENST00000465167 WDR70Q9NW82 654 aa10.03□□□□□ -0.8
SSBP1-204ENST00000465167 ERCC6L2Q5T890 1561 aa10.01□□□□□ -0.81
SSBP1-204ENST00000465167 CUL7Q14999 1698 aa10□□□□□ -0.81
SSBP1-204ENST00000465167 TTLL13PA6NNM8 815 aa10□□□□□ -0.81
SSBP1-204ENST00000465167 HAX1O00165 279 aa10□□□□□ -0.81
SSBP1-204ENST00000465167 MKRN3Q13064 507 aaKnown RBP10□□□□□ -0.81
SSBP1-204ENST00000465167 P3H3Q8IVL6 736 aa10□□□□□ -0.81
SSBP1-204ENST00000465167 RUSC2Q8N2Y8 1516 aa9.99□□□□□ -0.81
SSBP1-204ENST00000465167 KIF27Q86VH2 1401 aa9.99□□□□□ -0.81
SSBP1-204ENST00000465167 PRG4Q92954 1404 aaPredicted RBP9.99□□□□□ -0.81
SSBP1-204ENST00000465167 GALR2O43603 387 aaPredicted RBP9.98□□□□□ -0.81
SSBP1-204ENST00000465167 EVX2Q03828 476 aa9.98□□□□□ -0.81
SSBP1-204ENST00000465167 BMP2KQ9NSY1 1161 aaPredicted RBP9.98□□□□□ -0.81
SSBP1-204ENST00000465167 CLCN6P51797 869 aa9.97□□□□□ -0.81
SSBP1-204ENST00000465167 JPH4Q96JJ6 628 aa9.97□□□□□ -0.81
SSBP1-204ENST00000465167 KCNV2Q8TDN2 545 aa9.96□□□□□ -0.82
SSBP1-204ENST00000465167 ILDR1Q86SU0 546 aaPredicted RBP9.95□□□□□ -0.82
SSBP1-204ENST00000465167 NCKAP5LQ9HCH0 1330 aa9.93□□□□□ -0.82
SSBP1-204ENST00000465167 TRIM35Q9UPQ4 493 aa9.93□□□□□ -0.82
SSBP1-204ENST00000465167 KIAA0586Q9BVV6 1533 aa9.92□□□□□ -0.82
SSBP1-204ENST00000465167 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.92□□□□□ -0.822e-7■■□□□ 12.8
SSBP1-204ENST00000465167 KIF13AQ9H1H9 1805 aa9.91□□□□□ -0.82
SSBP1-204ENST00000465167 PDE4AP27815 886 aa9.91□□□□□ -0.82
SSBP1-204ENST00000465167 E2F4Q16254 413 aa9.9□□□□□ -0.82
SSBP1-204ENST00000465167 IGF1RP08069 1367 aa9.89□□□□□ -0.83
SSBP1-204ENST00000465167 LARP6Q9BRS8 491 aaKnown RBP9.89□□□□□ -0.83
SSBP1-204ENST00000465167 CRISPLD2Q9H0B8 497 aa9.89□□□□□ -0.83
SSBP1-204ENST00000465167 CARMIL2Q6F5E8 1435 aa9.89□□□□□ -0.83
SSBP1-204ENST00000465167 CARMIL1Q5VZK9 1371 aa9.88□□□□□ -0.83
SSBP1-204ENST00000465167 MAPKBP1O60336 1514 aa9.88□□□□□ -0.83
SSBP1-204ENST00000465167 MFSD10Q14728 455 aa9.88□□□□□ -0.83
SSBP1-204ENST00000465167 ARHGEF1Q92888 912 aaKnown RBP9.88□□□□□ -0.83
SSBP1-204ENST00000465167 ADCY10Q96PN6 1610 aa9.88□□□□□ -0.83
SSBP1-204ENST00000465167 ATN1P54259 1190 aaPredicted RBP9.87□□□□□ -0.83
SSBP1-204ENST00000465167 IQGAP2Q13576 1575 aa9.87□□□□□ -0.83
SSBP1-204ENST00000465167 ATMINO43313 823 aaPredicted RBP9.86□□□□□ -0.83
SSBP1-204ENST00000465167 FAM69CQ0P6D2 419 aa9.86□□□□□ -0.83
SSBP1-204ENST00000465167 ABCC10Q5T3U5 1492 aa9.85□□□□□ -0.83
SSBP1-204ENST00000465167 TTBK1Q5TCY1 1321 aaPredicted RBP9.85□□□□□ -0.83
SSBP1-204ENST00000465167 DIP2BQ9P265 1576 aa9.84□□□□□ -0.83
SSBP1-204ENST00000465167 PTPRGP23470 1445 aa9.84□□□□□ -0.83
SSBP1-204ENST00000465167 ASTLQ6HA08 431 aaPredicted RBP9.84□□□□□ -0.83
SSBP1-204ENST00000465167 DPY19L2Q6NUT2 758 aa9.84□□□□□ -0.83
SSBP1-204ENST00000465167 DDX27Q96GQ7 796 aaKnown RBP9.84□□□□□ -0.83
SSBP1-204ENST00000465167 TSPOAP1O95153 1857 aa9.83□□□□□ -0.84
SSBP1-204ENST00000465167 PDCD7Q8N8D1 485 aaKnown RBP9.83□□□□□ -0.84
SSBP1-204ENST00000465167 TNIKQ9UKE5 1360 aa9.83□□□□□ -0.84
SSBP1-204ENST00000465167 RAPGEF2Q9Y4G8 1499 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms