RNA–Protein interactions for RNA: ENST00000464274.5

HCLS1-203, Transcript of hematopoietic cell-specific Lyn substrate 1, humanhuman

TSL 4

Gene HCLS1, Length 552 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCLS1-203ENST00000464274 PLCH2O75038 1416 aa25.19■■□□□ 1.62
HCLS1-203ENST00000464274 CDK13Q14004 1512 aaKnown RBP25.17■■□□□ 1.62
HCLS1-203ENST00000464274 ATP10AO60312 1499 aa25.16■■□□□ 1.62
HCLS1-203ENST00000464274 ILDR2Q71H61 639 aa25.16■■□□□ 1.62
HCLS1-203ENST00000464274 FER1L4A9Z1Z3 1794 aa25.16■■□□□ 1.62
HCLS1-203ENST00000464274 ARHGEF12Q9NZN5 1544 aa25.13■■□□□ 1.61
HCLS1-203ENST00000464274 EFCAB2Q5VUJ9 269 aa25.13■■□□□ 1.61
HCLS1-203ENST00000464274 ATP1B4Q9UN42 357 aaPredicted RBP25.11■■□□□ 1.61
HCLS1-203ENST00000464274 EEA1Q15075 1411 aa25.1■■□□□ 1.61
HCLS1-203ENST00000464274 C9orf84Q5VXU9 1444 aa25.1■■□□□ 1.61
HCLS1-203ENST00000464274 DISP3Q9P2K9 1392 aa25.09■■□□□ 1.61
HCLS1-203ENST00000464274 AFAP1Q8N556 730 aa25.08■■□□□ 1.61
HCLS1-203ENST00000464274 DMRT2Q9Y5R5 561 aa25.08■■□□□ 1.61
HCLS1-203ENST00000464274 PREX1Q8TCU6 1659 aa25.04■■□□□ 1.6
HCLS1-203ENST00000464274 STRCQ7RTU9 1775 aa25.04■■□□□ 1.6
HCLS1-203ENST00000464274 SOCS7O14512 581 aa25.02■■□□□ 1.6
HCLS1-203ENST00000464274 EHMT2Q96KQ7 1210 aa25.01■■□□□ 1.59
HCLS1-203ENST00000464274 MYT1LQ9UL68 1186 aa25.01■■□□□ 1.59
HCLS1-203ENST00000464274 SETD1BQ9UPS6 1966 aaKnown RBP25■■□□□ 1.59
HCLS1-203ENST00000464274 UHRF1BP1Q6BDS2 1440 aa24.99■■□□□ 1.59
HCLS1-203ENST00000464274 CDK11AQ9UQ88 783 aaPredicted RBP24.99■■□□□ 1.59
HCLS1-203ENST00000464274 ZNF518AQ6AHZ1 1483 aa24.96■■□□□ 1.59
HCLS1-203ENST00000464274 MYO5CQ9NQX4 1742 aa24.96■■□□□ 1.59
HCLS1-203ENST00000464274 UBTFP17480 764 aaKnown RBP24.94■■□□□ 1.58
HCLS1-203ENST00000464274 KIF14Q15058 1648 aa24.94■■□□□ 1.58
HCLS1-203ENST00000464274 PTPRTO14522 1441 aa24.92■■□□□ 1.58
HCLS1-203ENST00000464274 FMN1Q68DA7 1419 aa24.92■■□□□ 1.58
HCLS1-203ENST00000464274 KDM5CP41229 1560 aa24.92■■□□□ 1.58
HCLS1-203ENST00000464274 ARHGAP5Q13017 1502 aa24.91■■□□□ 1.58
HCLS1-203ENST00000464274 TROQ12816 1431 aaPredicted RBP24.91■■□□□ 1.58
HCLS1-203ENST00000464274 ARHGAP35Q9NRY4 1499 aa24.89■■□□□ 1.58
HCLS1-203ENST00000464274 DIP2CQ9Y2E4 1556 aa24.89■■□□□ 1.58
HCLS1-203ENST00000464274 ESF1Q9H501 851 aaKnown RBP24.87■■□□□ 1.57
HCLS1-203ENST00000464274 MLH3Q9UHC1 1453 aa24.86■■□□□ 1.57
HCLS1-203ENST00000464274 TRAPPC8Q9Y2L5 1435 aa24.86■■□□□ 1.57
HCLS1-203ENST00000464274 C3P01024 1663 aa24.85■■□□□ 1.57
HCLS1-203ENST00000464274 LTBP4Q8N2S1 1624 aa24.84■■□□□ 1.57
HCLS1-203ENST00000464274 REREQ9P2R6 1566 aa24.84■■□□□ 1.57
HCLS1-203ENST00000464274 ABCA6Q8N139 1617 aa24.83■■□□□ 1.56
HCLS1-203ENST00000464274 CLIP1P30622 1438 aa24.82■■□□□ 1.56
HCLS1-203ENST00000464274 AGLP35573 1532 aa24.81■■□□□ 1.56
HCLS1-203ENST00000464274 CDC42BPBQ9Y5S2 1711 aa24.81■■□□□ 1.56
HCLS1-203ENST00000464274 NCOA1Q15788 1441 aa24.78■■□□□ 1.56
HCLS1-203ENST00000464274 SPATA31D1Q6ZQQ2 1576 aa24.77■■□□□ 1.56
HCLS1-203ENST00000464274 LRRIQ1Q96JM4 1722 aa24.76■■□□□ 1.55
HCLS1-203ENST00000464274 NCKAP5LQ9HCH0 1330 aa24.74■■□□□ 1.55
HCLS1-203ENST00000464274 ABCC1P33527 1531 aa24.72■■□□□ 1.55
HCLS1-203ENST00000464274 CNTLNQ9NXG0 1405 aa24.72■■□□□ 1.55
HCLS1-203ENST00000464274 KIDINS220Q9ULH0 1771 aa24.72■■□□□ 1.55
HCLS1-203ENST00000464274 IQSEC2Q5JU85 1478 aa24.71■■□□□ 1.55
HCLS1-203ENST00000464274 ZMYM3Q14202 1370 aa24.71■■□□□ 1.55
HCLS1-203ENST00000464274 ZNF335Q9H4Z2 1342 aaPredicted RBP24.69■■□□□ 1.54
HCLS1-203ENST00000464274 ZNF777Q9ULD5 760 aaPredicted RBP24.69■■□□□ 1.54
HCLS1-203ENST00000464274 CAMSAP1Q5T5Y3 1602 aa24.68■■□□□ 1.54
HCLS1-203ENST00000464274 PREX2Q70Z35 1606 aa24.68■■□□□ 1.54
HCLS1-203ENST00000464274 ITSN2Q9NZM3 1697 aa24.68■■□□□ 1.54
HCLS1-203ENST00000464274 UBAP1LF5GYI3 381 aa24.67■■□□□ 1.54
HCLS1-203ENST00000464274 HNRNPMP52272 730 aaKnown RBP eCLIP24.66■■□□□ 1.54
HCLS1-203ENST00000464274 NPATQ14207 1427 aa24.66■■□□□ 1.54
HCLS1-203ENST00000464274 SPAG9O60271 1321 aaKnown RBP24.62■■□□□ 1.53
HCLS1-203ENST00000464274 CASKIN1Q8WXD9 1431 aa24.62■■□□□ 1.53
HCLS1-203ENST00000464274 SAMD9LQ8IVG5 1584 aa24.62■■□□□ 1.53
HCLS1-203ENST00000464274 CDC42BPAQ5VT25 1732 aa24.6■■□□□ 1.53
HCLS1-203ENST00000464274 PKD2Q13563 968 aa24.59■■□□□ 1.53
HCLS1-203ENST00000464274 CCDC18Q5T9S5 1454 aa24.58■■□□□ 1.53
HCLS1-203ENST00000464274 GGT6Q6P531 493 aa24.58■■□□□ 1.53
HCLS1-203ENST00000464274 MROH2AA6NES4 1674 aa24.57■■□□□ 1.52
HCLS1-203ENST00000464274 SUPT6HQ7KZ85 1726 aaKnown RBP24.56■■□□□ 1.52
HCLS1-203ENST00000464274 GPATCH8Q9UKJ3 1502 aaKnown RBP24.56■■□□□ 1.52
HCLS1-203ENST00000464274 PTPRKQ15262 1439 aa24.55■■□□□ 1.52
HCLS1-203ENST00000464274 CHIC1Q5VXU3 224 aa24.54■■□□□ 1.52
HCLS1-203ENST00000464274 SYCP2Q9BX26 1530 aa24.54■■□□□ 1.52
HCLS1-203ENST00000464274 PLA2R1Q13018 1463 aa24.52■■□□□ 1.52
HCLS1-203ENST00000464274 CLTCQ00610 1675 aaKnown RBP24.52■■□□□ 1.52
HCLS1-203ENST00000464274 TCOF1Q13428 1488 aaKnown RBP24.51■■□□□ 1.51
HCLS1-203ENST00000464274 CFDP1Q9UEE9 299 aaPredicted RBP24.51■■□□□ 1.51
HCLS1-203ENST00000464274 PPP6R1Q9UPN7 881 aa24.51■■□□□ 1.51
HCLS1-203ENST00000464274 A2MP01023 1474 aa24.51■■□□□ 1.51
HCLS1-203ENST00000464274 ATP7AQ04656 1500 aa24.48■■□□□ 1.51
HCLS1-203ENST00000464274 KIAA1107Q9UPP5 1409 aa24.48■■□□□ 1.51
HCLS1-203ENST00000464274 MYO3AQ8NEV4 1616 aa24.47■■□□□ 1.51
HCLS1-203ENST00000464274 CEP170BQ9Y4F5 1589 aaPredicted RBP24.47■■□□□ 1.51
HCLS1-203ENST00000464274 HSPA1LP34931 641 aa24.46■■□□□ 1.51
HCLS1-203ENST00000464274 PLXNC1O60486 1568 aa24.46■■□□□ 1.51
HCLS1-203ENST00000464274 ZNF142P52746 1687 aaPredicted RBP24.45■■□□□ 1.5
HCLS1-203ENST00000464274 ZNF644Q9H582 1327 aaPredicted RBP24.43■■□□□ 1.5
HCLS1-203ENST00000464274 PIP4K2BP78356 416 aa24.43■■□□□ 1.5
HCLS1-203ENST00000464274 FYCO1Q9BQS8 1478 aa24.43■■□□□ 1.5
HCLS1-203ENST00000464274 SCAF1Q9H7N4 1312 aaKnown RBP24.42■■□□□ 1.5
HCLS1-203ENST00000464274 INO80Q9ULG1 1556 aaPredicted RBP24.42■■□□□ 1.5
HCLS1-203ENST00000464274 CCNB3Q8WWL7 1395 aa24.42■■□□□ 1.5
HCLS1-203ENST00000464274 FBXO31Q5XUX0 539 aaPredicted RBP24.41■■□□□ 1.5
HCLS1-203ENST00000464274 PLEKHH2Q8IVE3 1493 aa24.4■■□□□ 1.5
HCLS1-203ENST00000464274 A2ML1A8K2U0 1454 aa24.39■■□□□ 1.5
HCLS1-203ENST00000464274 TOM1O60784 492 aa24.38■■□□□ 1.49
HCLS1-203ENST00000464274 DNMT1P26358 1616 aaKnown RBP24.37■■□□□ 1.49
HCLS1-203ENST00000464274 DHX29Q7Z478 1369 aaKnown RBP24.33■■□□□ 1.49
HCLS1-203ENST00000464274 MBD5Q9P267 1494 aa24.32■■□□□ 1.48
HCLS1-203ENST00000464274 SHANK2Q9UPX8 1470 aa24.32■■□□□ 1.48
HCLS1-203ENST00000464274 MTUS2Q5JR59 1369 aa24.31■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms