RNA–Protein interactions for RNA: ENST00000463905.1

ARHGAP4-216, Transcript of Rho GTPase activating protein 4, humanhuman

TSL 3

Gene ARHGAP4, Length 553 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGAP4-216ENST00000463905 IQSEC2Q5JU85 1478 aa18.06■□□□□ 0.48
ARHGAP4-216ENST00000463905 LTBP4Q8N2S1 1624 aa18.05■□□□□ 0.48
ARHGAP4-216ENST00000463905 CFAP74Q9C0B2 1584 aa18.04■□□□□ 0.48
ARHGAP4-216ENST00000463905 RAPGEF6Q8TEU7 1601 aa18.01■□□□□ 0.47
ARHGAP4-216ENST00000463905 HECW1Q76N89 1606 aa18.01■□□□□ 0.47
ARHGAP4-216ENST00000463905 NUP153P49790 1475 aaKnown RBP18■□□□□ 0.47
ARHGAP4-216ENST00000463905 PLEKHD1A6NEE1 506 aa17.98■□□□□ 0.47
ARHGAP4-216ENST00000463905 ATP10AO60312 1499 aa17.98■□□□□ 0.47
ARHGAP4-216ENST00000463905 PRXQ9BXM0 1461 aa17.98■□□□□ 0.47
ARHGAP4-216ENST00000463905 C9orf84Q5VXU9 1444 aa17.98■□□□□ 0.47
ARHGAP4-216ENST00000463905 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.96■□□□□ 0.47
ARHGAP4-216ENST00000463905 SCAPERQ9BY12 1400 aa17.95■□□□□ 0.46
ARHGAP4-216ENST00000463905 SAMD9Q5K651 1589 aa17.93■□□□□ 0.46
ARHGAP4-216ENST00000463905 UBAP1LF5GYI3 381 aa17.93■□□□□ 0.46
ARHGAP4-216ENST00000463905 NCOA1Q15788 1441 aa17.9■□□□□ 0.46
ARHGAP4-216ENST00000463905 SETD1BQ9UPS6 1966 aaKnown RBP17.88■□□□□ 0.45
ARHGAP4-216ENST00000463905 PLCH2O75038 1416 aa17.86■□□□□ 0.45
ARHGAP4-216ENST00000463905 TRAPPC8Q9Y2L5 1435 aa17.85■□□□□ 0.45
ARHGAP4-216ENST00000463905 MED1Q15648 1581 aaPredicted RBP17.84■□□□□ 0.45
ARHGAP4-216ENST00000463905 ZNF335Q9H4Z2 1342 aaPredicted RBP17.84■□□□□ 0.45
ARHGAP4-216ENST00000463905 C3P01024 1663 aa17.82■□□□□ 0.44
ARHGAP4-216ENST00000463905 ESF1Q9H501 851 aaKnown RBP17.81■□□□□ 0.44
ARHGAP4-216ENST00000463905 ZNF518AQ6AHZ1 1483 aa17.8■□□□□ 0.44
ARHGAP4-216ENST00000463905 HSPA1LP34931 641 aa17.79■□□□□ 0.44
ARHGAP4-216ENST00000463905 EFCAB2Q5VUJ9 269 aa17.79■□□□□ 0.44
ARHGAP4-216ENST00000463905 CAMSAP1Q5T5Y3 1602 aa17.79■□□□□ 0.44
ARHGAP4-216ENST00000463905 NCKAP5LQ9HCH0 1330 aa17.76■□□□□ 0.43
ARHGAP4-216ENST00000463905 REREQ9P2R6 1566 aa17.76■□□□□ 0.43
ARHGAP4-216ENST00000463905 DIP2CQ9Y2E4 1556 aa17.76■□□□□ 0.43
ARHGAP4-216ENST00000463905 AFAP1Q8N556 730 aa17.76■□□□□ 0.43
ARHGAP4-216ENST00000463905 MYT1LQ9UL68 1186 aa17.76■□□□□ 0.43
ARHGAP4-216ENST00000463905 KDM5CP41229 1560 aa17.75■□□□□ 0.43
ARHGAP4-216ENST00000463905 RANGAP1P46060 587 aaPredicted RBP17.75■□□□□ 0.43
ARHGAP4-216ENST00000463905 SCAF1Q9H7N4 1312 aaKnown RBP17.74■□□□□ 0.43
ARHGAP4-216ENST00000463905 PHF23Q9BUL5 403 aaPredicted RBP17.74■□□□□ 0.43
ARHGAP4-216ENST00000463905 AGLP35573 1532 aa17.73■□□□□ 0.43
ARHGAP4-216ENST00000463905 CNTLNQ9NXG0 1405 aa17.72■□□□□ 0.43
ARHGAP4-216ENST00000463905 CDK13Q14004 1512 aaKnown RBP17.72■□□□□ 0.43
ARHGAP4-216ENST00000463905 PIP4K2BP78356 416 aa17.72■□□□□ 0.43
ARHGAP4-216ENST00000463905 NPATQ14207 1427 aa17.72■□□□□ 0.43
ARHGAP4-216ENST00000463905 PKD2Q13563 968 aa17.7■□□□□ 0.42
ARHGAP4-216ENST00000463905 PLA2R1Q13018 1463 aa17.69■□□□□ 0.42
ARHGAP4-216ENST00000463905 MLH3Q9UHC1 1453 aa17.69■□□□□ 0.42
ARHGAP4-216ENST00000463905 ABCA6Q8N139 1617 aa17.69■□□□□ 0.42
ARHGAP4-216ENST00000463905 MYO5CQ9NQX4 1742 aa17.68■□□□□ 0.42
ARHGAP4-216ENST00000463905 TOM1O60784 492 aa17.67■□□□□ 0.42
ARHGAP4-216ENST00000463905 TCOF1Q13428 1488 aaKnown RBP17.66■□□□□ 0.42
ARHGAP4-216ENST00000463905 ARHGAP5Q13017 1502 aa17.66■□□□□ 0.42
ARHGAP4-216ENST00000463905 PPP6R1Q9UPN7 881 aa17.65■□□□□ 0.42
ARHGAP4-216ENST00000463905 CSRNP3Q8WYN3 585 aa17.64■□□□□ 0.41
ARHGAP4-216ENST00000463905 ZMYM3Q14202 1370 aa17.63■□□□□ 0.41
ARHGAP4-216ENST00000463905 CDK11AQ9UQ88 783 aaPredicted RBP17.6■□□□□ 0.41
ARHGAP4-216ENST00000463905 KIF14Q15058 1648 aa17.6■□□□□ 0.41
ARHGAP4-216ENST00000463905 MROH2AA6NES4 1674 aa17.6■□□□□ 0.41
ARHGAP4-216ENST00000463905 ZNF142P52746 1687 aaPredicted RBP17.59■□□□□ 0.41
ARHGAP4-216ENST00000463905 CEP170BQ9Y4F5 1589 aaPredicted RBP17.59■□□□□ 0.41
ARHGAP4-216ENST00000463905 MYO3AQ8NEV4 1616 aa17.58■□□□□ 0.41
ARHGAP4-216ENST00000463905 CPS1P31327 1500 aa17.58■□□□□ 0.41
ARHGAP4-216ENST00000463905 ATP1B4Q9UN42 357 aaPredicted RBP17.57■□□□□ 0.4
ARHGAP4-216ENST00000463905 TROQ12816 1431 aaPredicted RBP17.55■□□□□ 0.4
ARHGAP4-216ENST00000463905 ABCC1P33527 1531 aa17.54■□□□□ 0.4
ARHGAP4-216ENST00000463905 PTPRKQ15262 1439 aa17.54■□□□□ 0.4
ARHGAP4-216ENST00000463905 SHANK2Q9UPX8 1470 aa17.53■□□□□ 0.4
ARHGAP4-216ENST00000463905 CLIP1P30622 1438 aa17.53■□□□□ 0.4
ARHGAP4-216ENST00000463905 KIDINS220Q9ULH0 1771 aa17.52■□□□□ 0.4
ARHGAP4-216ENST00000463905 SUPT6HQ7KZ85 1726 aaKnown RBP17.51■□□□□ 0.39
ARHGAP4-216ENST00000463905 RGS17Q9UGC6 210 aaPredicted RBP17.5■□□□□ 0.39
ARHGAP4-216ENST00000463905 ALKQ9UM73 1620 aa17.5■□□□□ 0.39
ARHGAP4-216ENST00000463905 SENP3Q9H4L4 574 aaPredicted RBP17.49■□□□□ 0.39
ARHGAP4-216ENST00000463905 ITSN2Q9NZM3 1697 aa17.48■□□□□ 0.39
ARHGAP4-216ENST00000463905 FMN1Q68DA7 1419 aa17.48■□□□□ 0.39
ARHGAP4-216ENST00000463905 A2ML1A8K2U0 1454 aa17.48■□□□□ 0.39
ARHGAP4-216ENST00000463905 CLTCQ00610 1675 aaKnown RBP17.48■□□□□ 0.39
ARHGAP4-216ENST00000463905 CDC42BPBQ9Y5S2 1711 aa17.47■□□□□ 0.39
ARHGAP4-216ENST00000463905 NEURL4Q96JN8 1562 aa17.45■□□□□ 0.38
ARHGAP4-216ENST00000463905 DNMT1P26358 1616 aaKnown RBP17.45■□□□□ 0.38
ARHGAP4-216ENST00000463905 PREX2Q70Z35 1606 aa17.45■□□□□ 0.38
ARHGAP4-216ENST00000463905 SAMD9LQ8IVG5 1584 aa17.44■□□□□ 0.38
ARHGAP4-216ENST00000463905 VWDEQ8N2E2 1590 aa17.43■□□□□ 0.38
ARHGAP4-216ENST00000463905 SPAG9O60271 1321 aaKnown RBP17.43■□□□□ 0.38
ARHGAP4-216ENST00000463905 GGT6Q6P531 493 aa17.42■□□□□ 0.38
ARHGAP4-216ENST00000463905 EEA1Q15075 1411 aa17.4■□□□□ 0.38
ARHGAP4-216ENST00000463905 POLR1AO95602 1720 aaPredicted RBP17.4■□□□□ 0.38
ARHGAP4-216ENST00000463905 PLXNC1O60486 1568 aa17.4■□□□□ 0.38
ARHGAP4-216ENST00000463905 A2MP01023 1474 aa17.38■□□□□ 0.37
ARHGAP4-216ENST00000463905 ANKLE2Q86XL3 938 aa17.38■□□□□ 0.37
ARHGAP4-216ENST00000463905 POTEAQ6S8J7 498 aa17.37■□□□□ 0.37
ARHGAP4-216ENST00000463905 ATP7AQ04656 1500 aa17.37■□□□□ 0.37
ARHGAP4-216ENST00000463905 ZNF777Q9ULD5 760 aaPredicted RBP17.36■□□□□ 0.37
ARHGAP4-216ENST00000463905 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.36■□□□□ 0.37
ARHGAP4-216ENST00000463905 SYCP2Q9BX26 1530 aa17.36■□□□□ 0.37
ARHGAP4-216ENST00000463905 TNRQ92752 1358 aa17.35■□□□□ 0.37
ARHGAP4-216ENST00000463905 NPHP4O75161 1426 aaPredicted RBP17.35■□□□□ 0.37
ARHGAP4-216ENST00000463905 LRRC7Q96NW7 1537 aa17.34■□□□□ 0.37
ARHGAP4-216ENST00000463905 RNF17Q9BXT8 1623 aaKnown RBP17.34■□□□□ 0.37
ARHGAP4-216ENST00000463905 ARHGAP35Q9NRY4 1499 aa17.34■□□□□ 0.37
ARHGAP4-216ENST00000463905 MED14O60244 1454 aa17.33■□□□□ 0.37
ARHGAP4-216ENST00000463905 HNRNPMP52272 730 aaKnown RBP eCLIP17.33■□□□□ 0.36
ARHGAP4-216ENST00000463905 FBXO31Q5XUX0 539 aaPredicted RBP17.32■□□□□ 0.36
ARHGAP4-216ENST00000463905 INO80Q9ULG1 1556 aaPredicted RBP17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms