RNA–Protein interactions for RNA: ENST00000463461.5

VTCN1-205, Transcript of V-set domain containing T cell activation inhibitor 1, humanhuman

TSL 3

Gene VTCN1, Length 768 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTCN1-205ENST00000463461 ARHGEF12Q9NZN5 1544 aa11.6□□□□□ -0.55
VTCN1-205ENST00000463461 PTPRTO14522 1441 aa11.6□□□□□ -0.55
VTCN1-205ENST00000463461 UHRF1BP1Q6BDS2 1440 aa11.6□□□□□ -0.55
VTCN1-205ENST00000463461 IQSEC2Q5JU85 1478 aa11.59□□□□□ -0.55
VTCN1-205ENST00000463461 PLEKHD1A6NEE1 506 aa11.59□□□□□ -0.55
VTCN1-205ENST00000463461 CEBPAP49715 358 aaPredicted RBP11.59□□□□□ -0.55
VTCN1-205ENST00000463461 ATP10AO60312 1499 aa11.57□□□□□ -0.56
VTCN1-205ENST00000463461 LTBP4Q8N2S1 1624 aa11.57□□□□□ -0.56
VTCN1-205ENST00000463461 SAMD9Q5K651 1589 aa11.56□□□□□ -0.56
VTCN1-205ENST00000463461 NUP153P49790 1475 aaKnown RBP11.56□□□□□ -0.56
VTCN1-205ENST00000463461 PRXQ9BXM0 1461 aa11.56□□□□□ -0.56
VTCN1-205ENST00000463461 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.55□□□□□ -0.56
VTCN1-205ENST00000463461 C9orf84Q5VXU9 1444 aa11.55□□□□□ -0.56
VTCN1-205ENST00000463461 SCAPERQ9BY12 1400 aa11.53□□□□□ -0.56
VTCN1-205ENST00000463461 C3P01024 1663 aa11.51□□□□□ -0.57
VTCN1-205ENST00000463461 UBAP1LF5GYI3 381 aa11.5□□□□□ -0.57
VTCN1-205ENST00000463461 ESF1Q9H501 851 aaKnown RBP11.48□□□□□ -0.57
VTCN1-205ENST00000463461 PLCH2O75038 1416 aa11.48□□□□□ -0.57
VTCN1-205ENST00000463461 NCOA1Q15788 1441 aa11.47□□□□□ -0.57
VTCN1-205ENST00000463461 MYO5CQ9NQX4 1742 aa11.46□□□□□ -0.57
VTCN1-205ENST00000463461 TRAPPC8Q9Y2L5 1435 aa11.46□□□□□ -0.57
VTCN1-205ENST00000463461 EFCAB2Q5VUJ9 269 aa11.46□□□□□ -0.57
VTCN1-205ENST00000463461 MYT1LQ9UL68 1186 aa11.46□□□□□ -0.57
VTCN1-205ENST00000463461 ZNF518AQ6AHZ1 1483 aa11.44□□□□□ -0.58
VTCN1-205ENST00000463461 RANGAP1P46060 587 aaPredicted RBP11.44□□□□□ -0.58
VTCN1-205ENST00000463461 CAMSAP1Q5T5Y3 1602 aa11.44□□□□□ -0.58
VTCN1-205ENST00000463461 MED1Q15648 1581 aaPredicted RBP11.44□□□□□ -0.58
VTCN1-205ENST00000463461 REREQ9P2R6 1566 aa11.43□□□□□ -0.58
VTCN1-205ENST00000463461 KDM5CP41229 1560 aa11.42□□□□□ -0.58
VTCN1-205ENST00000463461 DIP2CQ9Y2E4 1556 aa11.42□□□□□ -0.58
VTCN1-205ENST00000463461 ZNF335Q9H4Z2 1342 aaPredicted RBP11.42□□□□□ -0.58
VTCN1-205ENST00000463461 SUPT6HQ7KZ85 1726 aaKnown RBP11.41□□□□□ -0.58
VTCN1-205ENST00000463461 AFAP1Q8N556 730 aa11.41□□□□□ -0.58
VTCN1-205ENST00000463461 AGLP35573 1532 aa11.4□□□□□ -0.58
VTCN1-205ENST00000463461 CDK13Q14004 1512 aaKnown RBP11.4□□□□□ -0.58
VTCN1-205ENST00000463461 NCKAP5LQ9HCH0 1330 aa11.4□□□□□ -0.58
VTCN1-205ENST00000463461 CNTLNQ9NXG0 1405 aa11.4□□□□□ -0.58
VTCN1-205ENST00000463461 SCAF1Q9H7N4 1312 aaKnown RBP11.39□□□□□ -0.59
VTCN1-205ENST00000463461 ABCA6Q8N139 1617 aa11.39□□□□□ -0.59
VTCN1-205ENST00000463461 HSPA1LP34931 641 aa11.39□□□□□ -0.59
VTCN1-205ENST00000463461 PHF23Q9BUL5 403 aaPredicted RBP11.39□□□□□ -0.59
VTCN1-205ENST00000463461 NPATQ14207 1427 aa11.38□□□□□ -0.59
VTCN1-205ENST00000463461 PKD2Q13563 968 aa11.38□□□□□ -0.59
VTCN1-205ENST00000463461 MROH2AA6NES4 1674 aa11.37□□□□□ -0.59
VTCN1-205ENST00000463461 ARHGAP5Q13017 1502 aa11.37□□□□□ -0.59
VTCN1-205ENST00000463461 PIP4K2BP78356 416 aa11.37□□□□□ -0.59
VTCN1-205ENST00000463461 CSRNP3Q8WYN3 585 aa11.37□□□□□ -0.59
VTCN1-205ENST00000463461 MLH3Q9UHC1 1453 aa11.37□□□□□ -0.59
VTCN1-205ENST00000463461 CDK11AQ9UQ88 783 aaPredicted RBP11.36□□□□□ -0.59
VTCN1-205ENST00000463461 TOM1O60784 492 aa11.35□□□□□ -0.59
VTCN1-205ENST00000463461 PLA2R1Q13018 1463 aa11.35□□□□□ -0.59
VTCN1-205ENST00000463461 KIF14Q15058 1648 aa11.35□□□□□ -0.59
VTCN1-205ENST00000463461 ZNF142P52746 1687 aaPredicted RBP11.34□□□□□ -0.59
VTCN1-205ENST00000463461 ATP1B4Q9UN42 357 aaPredicted RBP11.34□□□□□ -0.59
VTCN1-205ENST00000463461 ZMYM3Q14202 1370 aa11.33□□□□□ -0.6
VTCN1-205ENST00000463461 CDC42BPBQ9Y5S2 1711 aa11.33□□□□□ -0.6
VTCN1-205ENST00000463461 PPP6R1Q9UPN7 881 aa11.33□□□□□ -0.6
VTCN1-205ENST00000463461 TCOF1Q13428 1488 aaKnown RBP11.32□□□□□ -0.6
VTCN1-205ENST00000463461 MYO3AQ8NEV4 1616 aa11.32□□□□□ -0.6
VTCN1-205ENST00000463461 KIDINS220Q9ULH0 1771 aa11.32□□□□□ -0.6
VTCN1-205ENST00000463461 CEP170BQ9Y4F5 1589 aaPredicted RBP11.31□□□□□ -0.6
VTCN1-205ENST00000463461 CLTCQ00610 1675 aaKnown RBP11.3□□□□□ -0.6
VTCN1-205ENST00000463461 ITSN2Q9NZM3 1697 aa11.3□□□□□ -0.6
VTCN1-205ENST00000463461 CPS1P31327 1500 aa11.3□□□□□ -0.6
VTCN1-205ENST00000463461 CLIP1P30622 1438 aa11.29□□□□□ -0.6
VTCN1-205ENST00000463461 TROQ12816 1431 aaPredicted RBP11.29□□□□□ -0.6
VTCN1-205ENST00000463461 ABCC1P33527 1531 aa11.28□□□□□ -0.6
VTCN1-205ENST00000463461 PREX2Q70Z35 1606 aa11.27□□□□□ -0.6
VTCN1-205ENST00000463461 PTPRKQ15262 1439 aa11.27□□□□□ -0.6
VTCN1-205ENST00000463461 POLR1AO95602 1720 aaPredicted RBP11.27□□□□□ -0.61
VTCN1-205ENST00000463461 FMN1Q68DA7 1419 aa11.26□□□□□ -0.61
VTCN1-205ENST00000463461 SHANK2Q9UPX8 1470 aa11.26□□□□□ -0.61
VTCN1-205ENST00000463461 DNMT1P26358 1616 aaKnown RBP11.24□□□□□ -0.61
VTCN1-205ENST00000463461 EEA1Q15075 1411 aa11.24□□□□□ -0.61
VTCN1-205ENST00000463461 A2ML1A8K2U0 1454 aa11.24□□□□□ -0.61
VTCN1-205ENST00000463461 SAMD9LQ8IVG5 1584 aa11.23□□□□□ -0.61
VTCN1-205ENST00000463461 CDC42BPAQ5VT25 1732 aa11.23□□□□□ -0.61
VTCN1-205ENST00000463461 LRRIQ1Q96JM4 1722 aa11.23□□□□□ -0.61
VTCN1-205ENST00000463461 SENP3Q9H4L4 574 aaPredicted RBP11.22□□□□□ -0.61
VTCN1-205ENST00000463461 SPAG9O60271 1321 aaKnown RBP11.21□□□□□ -0.61
VTCN1-205ENST00000463461 GGT6Q6P531 493 aa11.21□□□□□ -0.61
VTCN1-205ENST00000463461 ALKQ9UM73 1620 aa11.2□□□□□ -0.62
VTCN1-205ENST00000463461 NEURL4Q96JN8 1562 aa11.2□□□□□ -0.62
VTCN1-205ENST00000463461 RGS17Q9UGC6 210 aaPredicted RBP11.19□□□□□ -0.62
VTCN1-205ENST00000463461 ZNF777Q9ULD5 760 aaPredicted RBP11.19□□□□□ -0.62
VTCN1-205ENST00000463461 PLXNC1O60486 1568 aa11.19□□□□□ -0.62
VTCN1-205ENST00000463461 VWDEQ8N2E2 1590 aa11.19□□□□□ -0.62
VTCN1-205ENST00000463461 ATP7AQ04656 1500 aa11.19□□□□□ -0.62
VTCN1-205ENST00000463461 ANKLE2Q86XL3 938 aa11.18□□□□□ -0.62
VTCN1-205ENST00000463461 A2MP01023 1474 aa11.18□□□□□ -0.62
VTCN1-205ENST00000463461 ARHGAP35Q9NRY4 1499 aa11.17□□□□□ -0.62
VTCN1-205ENST00000463461 SYCP2Q9BX26 1530 aa11.16□□□□□ -0.62
VTCN1-205ENST00000463461 HNRNPMP52272 730 aaKnown RBP eCLIP11.16□□□□□ -0.62
VTCN1-205ENST00000463461 ADGBQ8N7X0 1667 aa11.16□□□□□ -0.62
VTCN1-205ENST00000463461 RNF17Q9BXT8 1623 aaKnown RBP11.16□□□□□ -0.62
VTCN1-205ENST00000463461 INO80Q9ULG1 1556 aaPredicted RBP11.16□□□□□ -0.62
VTCN1-205ENST00000463461 THEMISQ8N1K5 641 aaPredicted RBP11.15□□□□□ -0.62
VTCN1-205ENST00000463461 TNRQ92752 1358 aa11.15□□□□□ -0.63
VTCN1-205ENST00000463461 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.15□□□□□ -0.63
VTCN1-205ENST00000463461 CCDC18Q5T9S5 1454 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms