RNA–Protein interactions for RNA: ENST00000463070.1

APP-212, Transcript of amyloid beta precursor protein, humanhuman

TSL 2

Gene APP, Length 582 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-212ENST00000463070 EFCAB2Q5VUJ9 269 aa14.19□□□□□ -0.14
APP-212ENST00000463070 ATP10AO60312 1499 aa14.18□□□□□ -0.14
APP-212ENST00000463070 C9orf84Q5VXU9 1444 aa14.18□□□□□ -0.14
APP-212ENST00000463070 SOCS7O14512 581 aa14.18□□□□□ -0.14
APP-212ENST00000463070 CDK11AQ9UQ88 783 aaPredicted RBP14.18□□□□□ -0.14
APP-212ENST00000463070 TTC37Q6PGP7 1564 aa14.17□□□□□ -0.14
APP-212ENST00000463070 HECW1Q76N89 1606 aa14.15□□□□□ -0.14
APP-212ENST00000463070 ARHGEF12Q9NZN5 1544 aa14.15□□□□□ -0.14
APP-212ENST00000463070 UHRF1BP1Q6BDS2 1440 aa14.15□□□□□ -0.14
APP-212ENST00000463070 CEBPAP49715 358 aaPredicted RBP14.14□□□□□ -0.15
APP-212ENST00000463070 MYT1LQ9UL68 1186 aa14.13□□□□□ -0.15
APP-212ENST00000463070 ESF1Q9H501 851 aaKnown RBP14.12□□□□□ -0.15
APP-212ENST00000463070 FER1L4A9Z1Z3 1794 aa14.11□□□□□ -0.15
APP-212ENST00000463070 ILDR2Q71H61 639 aa14.11□□□□□ -0.15
APP-212ENST00000463070 ATP1B4Q9UN42 357 aaPredicted RBP14.11□□□□□ -0.15
APP-212ENST00000463070 ZNF518AQ6AHZ1 1483 aa14.11□□□□□ -0.15
APP-212ENST00000463070 PTPRTO14522 1441 aa14.09□□□□□ -0.15
APP-212ENST00000463070 PREX1Q8TCU6 1659 aa14.09□□□□□ -0.15
APP-212ENST00000463070 CDK13Q14004 1512 aaKnown RBP14.09□□□□□ -0.15
APP-212ENST00000463070 FMN1Q68DA7 1419 aa14.08□□□□□ -0.15
APP-212ENST00000463070 SIGLEC1Q9BZZ2 1709 aa14.08□□□□□ -0.16
APP-212ENST00000463070 AFAP1Q8N556 730 aa14.08□□□□□ -0.16
APP-212ENST00000463070 CLIP1P30622 1438 aa14.06□□□□□ -0.16
APP-212ENST00000463070 TRAPPC8Q9Y2L5 1435 aa14.04□□□□□ -0.16
APP-212ENST00000463070 ARHGAP5Q13017 1502 aa14.04□□□□□ -0.16
APP-212ENST00000463070 UBTFP17480 764 aaKnown RBP14.03□□□□□ -0.16
APP-212ENST00000463070 TROQ12816 1431 aaPredicted RBP14.03□□□□□ -0.16
APP-212ENST00000463070 IQSEC2Q5JU85 1478 aa14.03□□□□□ -0.16
APP-212ENST00000463070 SETD1BQ9UPS6 1966 aaKnown RBP14.03□□□□□ -0.16
APP-212ENST00000463070 CNTLNQ9NXG0 1405 aa14.02□□□□□ -0.16
APP-212ENST00000463070 KDM5CP41229 1560 aa14.01□□□□□ -0.17
APP-212ENST00000463070 REREQ9P2R6 1566 aa14.01□□□□□ -0.17
APP-212ENST00000463070 MLH3Q9UHC1 1453 aa14.01□□□□□ -0.17
APP-212ENST00000463070 STRCQ7RTU9 1775 aa14□□□□□ -0.17
APP-212ENST00000463070 MYO5CQ9NQX4 1742 aa14□□□□□ -0.17
APP-212ENST00000463070 KIF14Q15058 1648 aa14□□□□□ -0.17
APP-212ENST00000463070 SPATA31D1Q6ZQQ2 1576 aa14□□□□□ -0.17
APP-212ENST00000463070 AGLP35573 1532 aa13.99□□□□□ -0.17
APP-212ENST00000463070 NCOA1Q15788 1441 aa13.98□□□□□ -0.17
APP-212ENST00000463070 DIP2CQ9Y2E4 1556 aa13.97□□□□□ -0.17
APP-212ENST00000463070 NPATQ14207 1427 aa13.96□□□□□ -0.18
APP-212ENST00000463070 LTBP4Q8N2S1 1624 aa13.95□□□□□ -0.18
APP-212ENST00000463070 ARHGAP35Q9NRY4 1499 aa13.94□□□□□ -0.18
APP-212ENST00000463070 UBAP1LF5GYI3 381 aa13.94□□□□□ -0.18
APP-212ENST00000463070 PKD2Q13563 968 aa13.94□□□□□ -0.18
APP-212ENST00000463070 ZMYM3Q14202 1370 aa13.92□□□□□ -0.18
APP-212ENST00000463070 C3P01024 1663 aa13.91□□□□□ -0.18
APP-212ENST00000463070 ABCA6Q8N139 1617 aa13.91□□□□□ -0.18
APP-212ENST00000463070 EHMT2Q96KQ7 1210 aa13.91□□□□□ -0.18
APP-212ENST00000463070 ABCC1P33527 1531 aa13.9□□□□□ -0.18
APP-212ENST00000463070 SPAG9O60271 1321 aaKnown RBP13.9□□□□□ -0.19
APP-212ENST00000463070 NCKAP5LQ9HCH0 1330 aa13.9□□□□□ -0.19
APP-212ENST00000463070 CAMSAP1Q5T5Y3 1602 aa13.89□□□□□ -0.19
APP-212ENST00000463070 ZNF335Q9H4Z2 1342 aaPredicted RBP13.89□□□□□ -0.19
APP-212ENST00000463070 CCDC18Q5T9S5 1454 aa13.88□□□□□ -0.19
APP-212ENST00000463070 ZNF777Q9ULD5 760 aaPredicted RBP13.88□□□□□ -0.19
APP-212ENST00000463070 PPP6R1Q9UPN7 881 aa13.88□□□□□ -0.19
APP-212ENST00000463070 PLA2R1Q13018 1463 aa13.87□□□□□ -0.19
APP-212ENST00000463070 CASKIN1Q8WXD9 1431 aa13.86□□□□□ -0.19
APP-212ENST00000463070 PREX2Q70Z35 1606 aa13.85□□□□□ -0.19
APP-212ENST00000463070 CDC42BPBQ9Y5S2 1711 aa13.84□□□□□ -0.19
APP-212ENST00000463070 TOM1O60784 492 aa13.83□□□□□ -0.2
APP-212ENST00000463070 GGT6Q6P531 493 aa13.83□□□□□ -0.2
APP-212ENST00000463070 KIAA1107Q9UPP5 1409 aa13.82□□□□□ -0.2
APP-212ENST00000463070 MROH2AA6NES4 1674 aa13.82□□□□□ -0.2
APP-212ENST00000463070 ITSN2Q9NZM3 1697 aa13.82□□□□□ -0.2
APP-212ENST00000463070 PLEKHH2Q8IVE3 1493 aa13.82□□□□□ -0.2
APP-212ENST00000463070 KIDINS220Q9ULH0 1771 aa13.82□□□□□ -0.2
APP-212ENST00000463070 HNRNPMP52272 730 aaKnown RBP eCLIP13.82□□□□□ -0.2
APP-212ENST00000463070 CFDP1Q9UEE9 299 aaPredicted RBP13.82□□□□□ -0.2
APP-212ENST00000463070 SAMD9LQ8IVG5 1584 aa13.82□□□□□ -0.2
APP-212ENST00000463070 PTPRKQ15262 1439 aa13.81□□□□□ -0.2
APP-212ENST00000463070 TCOF1Q13428 1488 aaKnown RBP13.81□□□□□ -0.2
APP-212ENST00000463070 SCAF1Q9H7N4 1312 aaKnown RBP13.81□□□□□ -0.2
APP-212ENST00000463070 A2MP01023 1474 aa13.8□□□□□ -0.2
APP-212ENST00000463070 GPATCH8Q9UKJ3 1502 aaKnown RBP13.79□□□□□ -0.2
APP-212ENST00000463070 CEP170BQ9Y4F5 1589 aaPredicted RBP13.79□□□□□ -0.2
APP-212ENST00000463070 PIP4K2BP78356 416 aa13.78□□□□□ -0.2
APP-212ENST00000463070 SYCP2Q9BX26 1530 aa13.78□□□□□ -0.2
APP-212ENST00000463070 HSPA1LP34931 641 aa13.77□□□□□ -0.21
APP-212ENST00000463070 ATP7AQ04656 1500 aa13.77□□□□□ -0.21
APP-212ENST00000463070 CCNB3Q8WWL7 1395 aa13.77□□□□□ -0.21
APP-212ENST00000463070 A2ML1A8K2U0 1454 aa13.76□□□□□ -0.21
APP-212ENST00000463070 FYCO1Q9BQS8 1478 aa13.76□□□□□ -0.21
APP-212ENST00000463070 MYO3AQ8NEV4 1616 aa13.75□□□□□ -0.21
APP-212ENST00000463070 PHF23Q9BUL5 403 aaPredicted RBP13.75□□□□□ -0.21
APP-212ENST00000463070 ZNF142P52746 1687 aaPredicted RBP13.75□□□□□ -0.21
APP-212ENST00000463070 PLXNC1O60486 1568 aa13.75□□□□□ -0.21
APP-212ENST00000463070 CPS1P31327 1500 aa13.74□□□□□ -0.21
APP-212ENST00000463070 ANKLE2Q86XL3 938 aa13.74□□□□□ -0.21
APP-212ENST00000463070 CDC42BPAQ5VT25 1732 aa13.73□□□□□ -0.21
APP-212ENST00000463070 THEMISQ8N1K5 641 aaPredicted RBP13.73□□□□□ -0.21
APP-212ENST00000463070 SUPT6HQ7KZ85 1726 aaKnown RBP13.73□□□□□ -0.21
APP-212ENST00000463070 LRRIQ1Q96JM4 1722 aa13.73□□□□□ -0.21
APP-212ENST00000463070 CLTCQ00610 1675 aaKnown RBP13.72□□□□□ -0.21
APP-212ENST00000463070 TNRQ92752 1358 aa13.72□□□□□ -0.21
APP-212ENST00000463070 SHANK2Q9UPX8 1470 aa13.72□□□□□ -0.21
APP-212ENST00000463070 MTUS2Q5JR59 1369 aa13.71□□□□□ -0.21
APP-212ENST00000463070 RTEL1-TNFRSF6BF6WH68 1400 aa13.71□□□□□ -0.22
APP-212ENST00000463070 INO80Q9ULG1 1556 aaPredicted RBP13.71□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 80.6 ms