RNA–Protein interactions for RNA: ENST00000462539.1

SREBF2-204, Transcript of sterol regulatory element binding transcription factor 2, humanhuman

TSL 2

Gene SREBF2, Length 796 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF2-204ENST00000462539 EIF4G3O43432 1585 aaKnown RBP10.39□□□□□ -0.75
SREBF2-204ENST00000462539 DISP1Q96F81 1524 aa10.39□□□□□ -0.75
SREBF2-204ENST00000462539 ROCK1Q13464 1354 aa10.39□□□□□ -0.75
SREBF2-204ENST00000462539 NUP153P49790 1475 aaKnown RBP10.38□□□□□ -0.75
SREBF2-204ENST00000462539 IFT140Q96RY7 1462 aa10.38□□□□□ -0.75
SREBF2-204ENST00000462539 BCANQ96GW7 911 aa10.38□□□□□ -0.75
SREBF2-204ENST00000462539 PPP6R1Q9UPN7 881 aa10.38□□□□□ -0.75
SREBF2-204ENST00000462539 RPRD2Q5VT52 1461 aaKnown RBP10.37□□□□□ -0.75
SREBF2-204ENST00000462539 NEFLP07196 543 aa10.37□□□□□ -0.75
SREBF2-204ENST00000462539 NCOA1Q15788 1441 aa10.37□□□□□ -0.75
SREBF2-204ENST00000462539 KIAA0586Q9BVV6 1533 aa10.37□□□□□ -0.75
SREBF2-204ENST00000462539 KIF14Q15058 1648 aa10.36□□□□□ -0.75
SREBF2-204ENST00000462539 RRP7BPQ9NSQ0 103 aa10.36□□□□□ -0.75
SREBF2-204ENST00000462539 ABCC5O15440 1437 aa10.35□□□□□ -0.75
SREBF2-204ENST00000462539 HSPA5P11021 654 aaKnown RBP10.35□□□□□ -0.75
SREBF2-204ENST00000462539 CDC42BPAQ5VT25 1732 aa10.35□□□□□ -0.75
SREBF2-204ENST00000462539 GRIN2AQ12879 1464 aa10.35□□□□□ -0.75
SREBF2-204ENST00000462539 MBD5Q9P267 1494 aa10.35□□□□□ -0.75
SREBF2-204ENST00000462539 WASHC2AQ641Q2 1341 aa10.34□□□□□ -0.75
SREBF2-204ENST00000462539 ZNF608Q9ULD9 1512 aaPredicted RBP10.34□□□□□ -0.75
SREBF2-204ENST00000462539 TRIM52Q96A61 297 aa10.34□□□□□ -0.75
SREBF2-204ENST00000462539 CAMSAP2Q08AD1 1489 aa10.34□□□□□ -0.75
SREBF2-204ENST00000462539 ANKRD30BQ9BXX2 1392 aa10.33□□□□□ -0.76
SREBF2-204ENST00000462539 ADGRL2O95490 1459 aa10.33□□□□□ -0.76
SREBF2-204ENST00000462539 PZPP20742 1482 aa10.33□□□□□ -0.76
SREBF2-204ENST00000462539 CEP170Q5SW79 1584 aa10.32□□□□□ -0.76
SREBF2-204ENST00000462539 CCDC7Q96M83 1385 aa10.32□□□□□ -0.76
SREBF2-204ENST00000462539 CHIC2Q9UKJ5 165 aa10.32□□□□□ -0.76
SREBF2-204ENST00000462539 BCORL1Q5H9F3 1711 aa10.31□□□□□ -0.76
SREBF2-204ENST00000462539 MPHOSPH9Q99550 1183 aa10.31□□□□□ -0.76
SREBF2-204ENST00000462539 TROQ12816 1431 aaPredicted RBP10.31□□□□□ -0.76
SREBF2-204ENST00000462539 EIF4G2P78344 907 aaKnown RBP eCLIP10.3□□□□□ -0.76
SREBF2-204ENST00000462539 ANP32EQ9BTT0 268 aa10.3□□□□□ -0.76
SREBF2-204ENST00000462539 KDM5CP41229 1560 aa10.3□□□□□ -0.76
SREBF2-204ENST00000462539 SPATA31E1Q6ZUB1 1445 aa10.29□□□□□ -0.76
SREBF2-204ENST00000462539 MAGI1Q96QZ7 1491 aaPredicted RBP10.29□□□□□ -0.76
SREBF2-204ENST00000462539 L3MBTL2Q969R5 705 aa10.28□□□□□ -0.76
SREBF2-204ENST00000462539 ERCC6Q03468 1493 aa10.28□□□□□ -0.76
SREBF2-204ENST00000462539 E9PCH4 1651 aa10.28□□□□□ -0.76
SREBF2-204ENST00000462539 KDM5DQ9BY66 1539 aa10.28□□□□□ -0.76
SREBF2-204ENST00000462539 HNRNPUQ00839 825 aaKnown RBP eCLIP10.27□□□□□ -0.77
SREBF2-204ENST00000462539 SHANK2Q9UPX8 1470 aa10.27□□□□□ -0.77
SREBF2-204ENST00000462539 GPATCH8Q9UKJ3 1502 aaKnown RBP10.26□□□□□ -0.77
SREBF2-204ENST00000462539 ABCA8O94911 1581 aa10.26□□□□□ -0.77
SREBF2-204ENST00000462539 NBPF8Q3BBV2 869 aa10.25□□□□□ -0.77
SREBF2-204ENST00000462539 PRG4Q92954 1404 aaPredicted RBP10.24□□□□□ -0.77
SREBF2-204ENST00000462539 KIAA1107Q9UPP5 1409 aa10.24□□□□□ -0.77
SREBF2-204ENST00000462539 SYNJ2O15056 1496 aa10.24□□□□□ -0.77
SREBF2-204ENST00000462539 PLB1Q6P1J6 1458 aa10.23□□□□□ -0.77
SREBF2-204ENST00000462539 ARHGEF12Q9NZN5 1544 aa10.23□□□□□ -0.77
SREBF2-204ENST00000462539 ARID3CA6NKF2 412 aa10.23□□□□□ -0.77
SREBF2-204ENST00000462539 C11orf95C9JLR9 678 aaPredicted RBP10.23□□□□□ -0.77
SREBF2-204ENST00000462539 RBM19Q9Y4C8 960 aaKnown RBP10.23□□□□□ -0.77
SREBF2-204ENST00000462539 ABCC10Q5T3U5 1492 aa10.23□□□□□ -0.77
SREBF2-204ENST00000462539 RALGAPBQ86X10 1494 aa10.23□□□□□ -0.77
SREBF2-204ENST00000462539 ARHGEF5Q12774 1597 aa10.22□□□□□ -0.77
SREBF2-204ENST00000462539 CCDC184Q52MB2 194 aa10.22□□□□□ -0.77
SREBF2-204ENST00000462539 ERICH6BQ5W0A0 696 aa10.22□□□□□ -0.77
SREBF2-204ENST00000462539 PRKRIP1Q9H875 184 aaPredicted RBP10.22□□□□□ -0.77
SREBF2-204ENST00000462539 KIF7Q2M1P5 1343 aa10.22□□□□□ -0.77
SREBF2-204ENST00000462539 ZNF644Q9H582 1327 aaPredicted RBP10.22□□□□□ -0.77
SREBF2-204ENST00000462539 NUP160Q12769 1436 aa10.22□□□□□ -0.77
SREBF2-204ENST00000462539 UHRF1BP1Q6BDS2 1440 aa10.21□□□□□ -0.78
SREBF2-204ENST00000462539 PREX2Q70Z35 1606 aa10.21□□□□□ -0.78
SREBF2-204ENST00000462539 ZBED9Q6R2W3 1325 aa10.2□□□□□ -0.78
SREBF2-204ENST00000462539 DHX29Q7Z478 1369 aaKnown RBP10.2□□□□□ -0.78
SREBF2-204ENST00000462539 SLC4A1APQ9BWU0 796 aaKnown RBP10.2□□□□□ -0.78
SREBF2-204ENST00000462539 CDK11AQ9UQ88 783 aaPredicted RBP10.19□□□□□ -0.78
SREBF2-204ENST00000462539 CDC42BPBQ9Y5S2 1711 aa10.19□□□□□ -0.78
SREBF2-204ENST00000462539 ANKRD30AQ9BXX3 1397 aa10.18□□□□□ -0.78
SREBF2-204ENST00000462539 MYO5CQ9NQX4 1742 aa10.18□□□□□ -0.78
SREBF2-204ENST00000462539 TRPM1Q7Z4N2 1603 aa10.18□□□□□ -0.78
SREBF2-204ENST00000462539 UNC13BO14795 1591 aa10.18□□□□□ -0.78
SREBF2-204ENST00000462539 C9orf84Q5VXU9 1444 aa10.17□□□□□ -0.78
SREBF2-204ENST00000462539 CARMIL2Q6F5E8 1435 aa10.17□□□□□ -0.78
SREBF2-204ENST00000462539 USP47Q96K76 1375 aa10.17□□□□□ -0.78
SREBF2-204ENST00000462539 IRX6P78412 446 aaPredicted RBP10.17□□□□□ -0.78
SREBF2-204ENST00000462539 MRS2Q9HD23 443 aa10.17□□□□□ -0.78
SREBF2-204ENST00000462539 LAMC1P11047 1609 aa10.17□□□□□ -0.78
SREBF2-204ENST00000462539 SAMD9LQ8IVG5 1584 aa10.17□□□□□ -0.78
SREBF2-204ENST00000462539 PTPRGP23470 1445 aa10.16□□□□□ -0.78
SREBF2-204ENST00000462539 SMG6Q86US8 1419 aaKnown RBP10.16□□□□□ -0.78
SREBF2-204ENST00000462539 FANCIQ9NVI1 1328 aa10.16□□□□□ -0.78
SREBF2-204ENST00000462539 PPP4R2Q9NY27 417 aa10.16□□□□□ -0.78
SREBF2-204ENST00000462539 MAST1Q9Y2H9 1570 aa10.16□□□□□ -0.78
SREBF2-204ENST00000462539 ANKRD50Q9ULJ7 1429 aa10.16□□□□□ -0.78
SREBF2-204ENST00000462539 CFDP1Q9UEE9 299 aaPredicted RBP10.15□□□□□ -0.78
SREBF2-204ENST00000462539 ATP10BO94823 1461 aa10.14□□□□□ -0.79
SREBF2-204ENST00000462539 ROCK2O75116 1388 aaKnown RBP10.14□□□□□ -0.79
SREBF2-204ENST00000462539 ARID4BQ4LE39 1312 aaPredicted RBP10.13□□□□□ -0.79
SREBF2-204ENST00000462539 FAM9BQ8IZU0 186 aa10.13□□□□□ -0.79
SREBF2-204ENST00000462539 PLXNC1O60486 1568 aa10.13□□□□□ -0.79
SREBF2-204ENST00000462539 IQGAP3Q86VI3 1631 aa10.12□□□□□ -0.79
SREBF2-204ENST00000462539 MSH5O43196 834 aa10.12□□□□□ -0.79
SREBF2-204ENST00000462539 CHD1O14646 1710 aa10.12□□□□□ -0.79
SREBF2-204ENST00000462539 FAM135AQ9P2D6 1515 aa10.12□□□□□ -0.79
SREBF2-204ENST00000462539 RNF17Q9BXT8 1623 aaKnown RBP10.11□□□□□ -0.79
SREBF2-204ENST00000462539 CCDC141Q6ZP82 1450 aa10.11□□□□□ -0.79
SREBF2-204ENST00000462539 EIF2AK4Q9P2K8 1649 aaKnown RBP10.11□□□□□ -0.79
SREBF2-204ENST00000462539 PKD2Q13563 968 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 92.5 ms