RNA–Protein interactions for RNA: ENST00000462267.1

APP-211, Transcript of amyloid beta precursor protein, humanhuman

TSL 2

Gene APP, Length 667 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-211ENST00000462267 HECW1Q76N89 1606 aa25.99■■□□□ 1.75
APP-211ENST00000462267 ARHGEF12Q9NZN5 1544 aa25.97■■□□□ 1.75
APP-211ENST00000462267 PREX1Q8TCU6 1659 aa25.96■■□□□ 1.75
APP-211ENST00000462267 CSRNP3Q8WYN3 585 aa25.95■■□□□ 1.74
APP-211ENST00000462267 SCAPERQ9BY12 1400 aa25.95■■□□□ 1.74
APP-211ENST00000462267 ATP10AO60312 1499 aa25.94■■□□□ 1.74
APP-211ENST00000462267 C9orf84Q5VXU9 1444 aa25.92■■□□□ 1.74
APP-211ENST00000462267 CEBPAP49715 358 aaPredicted RBP25.92■■□□□ 1.74
APP-211ENST00000462267 PLCH2O75038 1416 aa25.89■■□□□ 1.74
APP-211ENST00000462267 RANGAP1P46060 587 aaPredicted RBP25.89■■□□□ 1.74
APP-211ENST00000462267 STRCQ7RTU9 1775 aa25.89■■□□□ 1.73
APP-211ENST00000462267 UHRF1BP1Q6BDS2 1440 aa25.88■■□□□ 1.73
APP-211ENST00000462267 SPATA31D1Q6ZQQ2 1576 aa25.88■■□□□ 1.73
APP-211ENST00000462267 PTPRTO14522 1441 aa25.84■■□□□ 1.73
APP-211ENST00000462267 SETD1BQ9UPS6 1966 aaKnown RBP25.84■■□□□ 1.73
APP-211ENST00000462267 EFCAB2Q5VUJ9 269 aa25.83■■□□□ 1.73
APP-211ENST00000462267 CDK13Q14004 1512 aaKnown RBP25.77■■□□□ 1.72
APP-211ENST00000462267 IQSEC2Q5JU85 1478 aa25.76■■□□□ 1.71
APP-211ENST00000462267 ZNF518AQ6AHZ1 1483 aa25.76■■□□□ 1.71
APP-211ENST00000462267 LTBP4Q8N2S1 1624 aa25.73■■□□□ 1.71
APP-211ENST00000462267 AFAP1Q8N556 730 aa25.7■■□□□ 1.7
APP-211ENST00000462267 EEA1Q15075 1411 aa25.7■■□□□ 1.7
APP-211ENST00000462267 KDM5CP41229 1560 aa25.69■■□□□ 1.7
APP-211ENST00000462267 MYO5CQ9NQX4 1742 aa25.69■■□□□ 1.7
APP-211ENST00000462267 ESF1Q9H501 851 aaKnown RBP25.68■■□□□ 1.7
APP-211ENST00000462267 MYT1LQ9UL68 1186 aa25.68■■□□□ 1.7
APP-211ENST00000462267 CDK11AQ9UQ88 783 aaPredicted RBP25.68■■□□□ 1.7
APP-211ENST00000462267 TRAPPC8Q9Y2L5 1435 aa25.68■■□□□ 1.7
APP-211ENST00000462267 REREQ9P2R6 1566 aa25.68■■□□□ 1.7
APP-211ENST00000462267 NCOA1Q15788 1441 aa25.64■■□□□ 1.7
APP-211ENST00000462267 DIP2CQ9Y2E4 1556 aa25.64■■□□□ 1.69
APP-211ENST00000462267 C3P01024 1663 aa25.64■■□□□ 1.69
APP-211ENST00000462267 ARHGAP5Q13017 1502 aa25.62■■□□□ 1.69
APP-211ENST00000462267 MLH3Q9UHC1 1453 aa25.61■■□□□ 1.69
APP-211ENST00000462267 ATP1B4Q9UN42 357 aaPredicted RBP25.61■■□□□ 1.69
APP-211ENST00000462267 AGLP35573 1532 aa25.61■■□□□ 1.69
APP-211ENST00000462267 FMN1Q68DA7 1419 aa25.58■■□□□ 1.69
APP-211ENST00000462267 CNTLNQ9NXG0 1405 aa25.58■■□□□ 1.69
APP-211ENST00000462267 KIF14Q15058 1648 aa25.58■■□□□ 1.69
APP-211ENST00000462267 TROQ12816 1431 aaPredicted RBP25.56■■□□□ 1.68
APP-211ENST00000462267 ABCA6Q8N139 1617 aa25.55■■□□□ 1.68
APP-211ENST00000462267 UBAP1LF5GYI3 381 aa25.54■■□□□ 1.68
APP-211ENST00000462267 CLIP1P30622 1438 aa25.54■■□□□ 1.68
APP-211ENST00000462267 NPATQ14207 1427 aa25.52■■□□□ 1.68
APP-211ENST00000462267 CAMSAP1Q5T5Y3 1602 aa25.51■■□□□ 1.67
APP-211ENST00000462267 ZNF335Q9H4Z2 1342 aaPredicted RBP25.48■■□□□ 1.67
APP-211ENST00000462267 NCKAP5LQ9HCH0 1330 aa25.46■■□□□ 1.67
APP-211ENST00000462267 PKD2Q13563 968 aa25.45■■□□□ 1.66
APP-211ENST00000462267 ABCC1P33527 1531 aa25.44■■□□□ 1.66
APP-211ENST00000462267 ZMYM3Q14202 1370 aa25.44■■□□□ 1.66
APP-211ENST00000462267 CDC42BPBQ9Y5S2 1711 aa25.43■■□□□ 1.66
APP-211ENST00000462267 MROH2AA6NES4 1674 aa25.42■■□□□ 1.66
APP-211ENST00000462267 PLA2R1Q13018 1463 aa25.4■■□□□ 1.66
APP-211ENST00000462267 ARHGAP35Q9NRY4 1499 aa25.4■■□□□ 1.66
APP-211ENST00000462267 KIDINS220Q9ULH0 1771 aa25.4■■□□□ 1.66
APP-211ENST00000462267 ITSN2Q9NZM3 1697 aa25.39■■□□□ 1.65
APP-211ENST00000462267 PREX2Q70Z35 1606 aa25.38■■□□□ 1.65
APP-211ENST00000462267 UBTFP17480 764 aaKnown RBP25.38■■□□□ 1.65
APP-211ENST00000462267 TCOF1Q13428 1488 aaKnown RBP25.35■■□□□ 1.65
APP-211ENST00000462267 PPP6R1Q9UPN7 881 aa25.32■■□□□ 1.64
APP-211ENST00000462267 ZNF142P52746 1687 aaPredicted RBP25.32■■□□□ 1.64
APP-211ENST00000462267 SAMD9LQ8IVG5 1584 aa25.31■■□□□ 1.64
APP-211ENST00000462267 HSPA1LP34931 641 aa25.3■■□□□ 1.64
APP-211ENST00000462267 CEP170BQ9Y4F5 1589 aaPredicted RBP25.29■■□□□ 1.64
APP-211ENST00000462267 SPAG9O60271 1321 aaKnown RBP25.29■■□□□ 1.64
APP-211ENST00000462267 MYO3AQ8NEV4 1616 aa25.29■■□□□ 1.64
APP-211ENST00000462267 LRRIQ1Q96JM4 1722 aa25.29■■□□□ 1.64
APP-211ENST00000462267 PTPRKQ15262 1439 aa25.29■■□□□ 1.64
APP-211ENST00000462267 MED1Q15648 1581 aaPredicted RBP25.28■■□□□ 1.64
APP-211ENST00000462267 TOM1O60784 492 aa25.26■■□□□ 1.63
APP-211ENST00000462267 EHMT2Q96KQ7 1210 aa25.26■■□□□ 1.63
APP-211ENST00000462267 SCAF1Q9H7N4 1312 aaKnown RBP25.26■■□□□ 1.63
APP-211ENST00000462267 CCDC18Q5T9S5 1454 aa25.26■■□□□ 1.63
APP-211ENST00000462267 CLTCQ00610 1675 aaKnown RBP25.24■■□□□ 1.63
APP-211ENST00000462267 PIP4K2BP78356 416 aa25.24■■□□□ 1.63
APP-211ENST00000462267 ZNF777Q9ULD5 760 aaPredicted RBP25.24■■□□□ 1.63
APP-211ENST00000462267 SUPT6HQ7KZ85 1726 aaKnown RBP25.23■■□□□ 1.63
APP-211ENST00000462267 CDC42BPAQ5VT25 1732 aa25.23■■□□□ 1.63
APP-211ENST00000462267 CASKIN1Q8WXD9 1431 aa25.2■■□□□ 1.63
APP-211ENST00000462267 PLXNC1O60486 1568 aa25.2■■□□□ 1.62
APP-211ENST00000462267 HNRNPMP52272 730 aaKnown RBP eCLIP25.2■■□□□ 1.62
APP-211ENST00000462267 GGT6Q6P531 493 aa25.2■■□□□ 1.62
APP-211ENST00000462267 SYCP2Q9BX26 1530 aa25.2■■□□□ 1.62
APP-211ENST00000462267 A2MP01023 1474 aa25.2■■□□□ 1.62
APP-211ENST00000462267 CPS1P31327 1500 aa25.19■■□□□ 1.62
APP-211ENST00000462267 ATP7AQ04656 1500 aa25.19■■□□□ 1.62
APP-211ENST00000462267 A2ML1A8K2U0 1454 aa25.18■■□□□ 1.62
APP-211ENST00000462267 KIAA1107Q9UPP5 1409 aa25.17■■□□□ 1.62
APP-211ENST00000462267 PHF23Q9BUL5 403 aaPredicted RBP25.16■■□□□ 1.62
APP-211ENST00000462267 GPATCH8Q9UKJ3 1502 aaKnown RBP25.15■■□□□ 1.62
APP-211ENST00000462267 SHANK2Q9UPX8 1470 aa25.15■■□□□ 1.62
APP-211ENST00000462267 PLEKHH2Q8IVE3 1493 aa25.14■■□□□ 1.61
APP-211ENST00000462267 DNMT1P26358 1616 aaKnown RBP25.13■■□□□ 1.61
APP-211ENST00000462267 INO80Q9ULG1 1556 aaPredicted RBP25.13■■□□□ 1.61
APP-211ENST00000462267 CFDP1Q9UEE9 299 aaPredicted RBP25.09■■□□□ 1.61
APP-211ENST00000462267 NEURL4Q96JN8 1562 aa25.07■■□□□ 1.6
APP-211ENST00000462267 ANKLE2Q86XL3 938 aa25.05■■□□□ 1.6
APP-211ENST00000462267 POLR1AO95602 1720 aaPredicted RBP25.05■■□□□ 1.6
APP-211ENST00000462267 TNRQ92752 1358 aa25.05■■□□□ 1.6
APP-211ENST00000462267 FYCO1Q9BQS8 1478 aa25.04■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms