RNA–Protein interactions for RNA: ENST00000461990.1

LINC01140-201, Transcript of long intergenic non-protein coding RNA 1140, humanhuman

TSL 1 (best) BASIC

Gene LINC01140, Length 3,181 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01140-201ENST00000461990 MRS2Q9HD23 443 aa12.1□□□□□ -0.47
LINC01140-201ENST00000461990 FAM9BQ8IZU0 186 aa12.1□□□□□ -0.47
LINC01140-201ENST00000461990 TIAM1Q13009 1591 aa12.09□□□□□ -0.47
LINC01140-201ENST00000461990 NCOA1Q15788 1441 aa12.09□□□□□ -0.47
LINC01140-201ENST00000461990 THOC2Q8NI27 1593 aaKnown RBP12.09□□□□□ -0.47
LINC01140-201ENST00000461990 ERCC6Q03468 1493 aa12.07□□□□□ -0.48
LINC01140-201ENST00000461990 PRXQ9BXM0 1461 aa12.07□□□□□ -0.48
LINC01140-201ENST00000461990 VIRMAQ69YN4 1812 aaKnown RBP12.07□□□□□ -0.48
LINC01140-201ENST00000461990 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.06□□□□□ -0.48
LINC01140-201ENST00000461990 KIF21AQ7Z4S6 1674 aa12.06□□□□□ -0.48
LINC01140-201ENST00000461990 FSD2A1L4K1 749 aa12.06□□□□□ -0.48
LINC01140-201ENST00000461990 NESP48681 1621 aa12.04□□□□□ -0.48
LINC01140-201ENST00000461990 RRP1P56182 461 aaKnown RBP12.04□□□□□ -0.48
LINC01140-201ENST00000461990 BCL11BQ9C0K0 894 aaPredicted RBP12.04□□□□□ -0.48
LINC01140-201ENST00000461990 ARXQ96QS3 562 aa12.04□□□□□ -0.48
LINC01140-201ENST00000461990 PDS5BQ9NTI5 1447 aa12.03□□□□□ -0.48
LINC01140-201ENST00000461990 CCDC7Q96M83 1385 aa12.03□□□□□ -0.48
LINC01140-201ENST00000461990 POGKQ9P215 609 aa12.03□□□□□ -0.48
LINC01140-201ENST00000461990 RGS3P49796 1198 aa12.02□□□□□ -0.48
LINC01140-201ENST00000461990 CFAP43Q8NDM7 1665 aa12.02□□□□□ -0.49
LINC01140-201ENST00000461990 SMAP1Q8IYB5 467 aaPredicted RBP12.02□□□□□ -0.49
LINC01140-201ENST00000461990 CADPSQ9ULU8 1353 aa12.02□□□□□ -0.49
LINC01140-201ENST00000461990 HSPA5P11021 654 aaKnown RBP12.02□□□□□ -0.49
LINC01140-201ENST00000461990 TAF7LQ5H9L4 462 aa12.02□□□□□ -0.49
LINC01140-201ENST00000461990 MAP7D2Q96T17 732 aa12.02□□□□□ -0.49
LINC01140-201ENST00000461990 UACAQ9BZF9 1416 aa12.01□□□□□ -0.49
LINC01140-201ENST00000461990 XRCC6P12956 609 aaKnown RBP eCLIP12.01□□□□□ -0.49
LINC01140-201ENST00000461990 EXOC6Q8TAG9 804 aa12□□□□□ -0.49
LINC01140-201ENST00000461990 LRRC9Q6ZRR7 1453 aa12□□□□□ -0.49
LINC01140-201ENST00000461990 SLC4A3P48751 1232 aa12□□□□□ -0.49
LINC01140-201ENST00000461990 TERF1P54274 439 aa12□□□□□ -0.49
LINC01140-201ENST00000461990 ARHGAP35Q9NRY4 1499 aa12□□□□□ -0.49
LINC01140-201ENST00000461990 CFTRP13569 1480 aa11.98□□□□□ -0.49
LINC01140-201ENST00000461990 MYOM3Q5VTT5 1437 aa11.98□□□□□ -0.49
LINC01140-201ENST00000461990 PHLDB1Q86UU1 1377 aa11.97□□□□□ -0.49
LINC01140-201ENST00000461990 GOLGA6L3A6NEY3 463 aa11.97□□□□□ -0.49
LINC01140-201ENST00000461990 ESPNB1AK53 854 aa11.97□□□□□ -0.49
LINC01140-201ENST00000461990 EIF4G2P78344 907 aaKnown RBP eCLIP11.97□□□□□ -0.49
LINC01140-201ENST00000461990 UTP14CQ5TAP6 766 aaKnown RBP11.97□□□□□ -0.49
LINC01140-201ENST00000461990 WDR62O43379 1518 aa11.97□□□□□ -0.49
LINC01140-201ENST00000461990 TOP2BQ02880 1626 aa11.96□□□□□ -0.49
LINC01140-201ENST00000461990 FAM161AQ3B820 660 aa11.95□□□□□ -0.5
LINC01140-201ENST00000461990 CCDC18Q5T9S5 1454 aa11.95□□□□□ -0.5
LINC01140-201ENST00000461990 BIVM-ERCC5R4GMW8 1640 aa11.95□□□□□ -0.5
LINC01140-201ENST00000461990 GTF2E1P29083 439 aaPredicted RBP11.95□□□□□ -0.5
LINC01140-201ENST00000461990 C8orf34Q49A92 452 aa11.95□□□□□ -0.5
LINC01140-201ENST00000461990 KLHL34Q8N239 644 aa11.95□□□□□ -0.5
LINC01140-201ENST00000461990 ISY1Q9ULR0 285 aaKnown RBP11.95□□□□□ -0.5
LINC01140-201ENST00000461990 MRC2Q9UBG0 1479 aa11.94□□□□□ -0.5
LINC01140-201ENST00000461990 NCLP19338 710 aaKnown RBP11.94□□□□□ -0.5
LINC01140-201ENST00000461990 LRPPRCP42704 1394 aaKnown RBP11.94□□□□□ -0.5
LINC01140-201ENST00000461990 PTPN23Q9H3S7 1636 aa11.94□□□□□ -0.5
LINC01140-201ENST00000461990 KTN1Q86UP2 1357 aaKnown RBP11.94□□□□□ -0.5
LINC01140-201ENST00000461990 KDM2BQ8NHM5 1336 aa11.93□□□□□ -0.5
LINC01140-201ENST00000461990 RANGAP1P46060 587 aaPredicted RBP11.93□□□□□ -0.5
LINC01140-201ENST00000461990 MRE11P49959 708 aa11.93□□□□□ -0.5
LINC01140-201ENST00000461990 DHX29Q7Z478 1369 aaKnown RBP11.93□□□□□ -0.5
LINC01140-201ENST00000461990 HFM1A2PYH4 1435 aa11.93□□□□□ -0.5
LINC01140-201ENST00000461990 BBXQ8WY36 941 aaPredicted RBP11.92□□□□□ -0.5
LINC01140-201ENST00000461990 ERBB4Q15303 1308 aa11.92□□□□□ -0.5
LINC01140-201ENST00000461990 NAP1L2Q9ULW6 460 aaPredicted RBP11.91□□□□□ -0.5
LINC01140-201ENST00000461990 SPATA31E1Q6ZUB1 1445 aa11.91□□□□□ -0.5
LINC01140-201ENST00000461990 MTERF4Q7Z6M4 381 aaKnown RBP11.91□□□□□ -0.5
LINC01140-201ENST00000461990 IPO4Q8TEX9 1081 aaKnown RBP11.91□□□□□ -0.5
LINC01140-201ENST00000461990 STAC3Q96MF2 364 aa11.91□□□□□ -0.5
LINC01140-201ENST00000461990 RCAN3Q9UKA8 241 aa11.91□□□□□ -0.5
LINC01140-201ENST00000461990 HECW1Q76N89 1606 aa11.91□□□□□ -0.5
LINC01140-201ENST00000461990 PANK2Q9BZ23 570 aa11.9□□□□□ -0.5
LINC01140-201ENST00000461990 PNISRQ8TF01 805 aaKnown RBP11.89□□□□□ -0.51
LINC01140-201ENST00000461990 ANTXR1Q9H6X2 564 aa11.89□□□□□ -0.51
LINC01140-201ENST00000461990 ZNF326Q5BKZ1 582 aaKnown RBP11.89□□□□□ -0.51
LINC01140-201ENST00000461990 PDE3BQ13370 1112 aa11.89□□□□□ -0.51
LINC01140-201ENST00000461990 FANCD2Q9BXW9 1451 aa11.89□□□□□ -0.51
LINC01140-201ENST00000461990 RIPK4P57078 832 aa11.88□□□□□ -0.51
LINC01140-201ENST00000461990 DMTNQ08495 405 aa11.88□□□□□ -0.51
LINC01140-201ENST00000461990 CANXP27824 592 aaKnown RBP11.88□□□□□ -0.51
LINC01140-201ENST00000461990 RSPH4AQ5TD94 716 aa11.88□□□□□ -0.51
LINC01140-201ENST00000461990 KIAA1211Q6ZU35 1233 aa11.88□□□□□ -0.51
LINC01140-201ENST00000461990 OFD1O75665 1012 aa11.87□□□□□ -0.51
LINC01140-201ENST00000461990 CENPQQ7L2Z9 268 aaPredicted RBP11.87□□□□□ -0.51
LINC01140-201ENST00000461990 MYH16Q9H6N6 1097 aa11.87□□□□□ -0.51
LINC01140-201ENST00000461990 KIF7Q2M1P5 1343 aa11.86□□□□□ -0.51
LINC01140-201ENST00000461990 BECN1Q14457 450 aa11.84□□□□□ -0.51
LINC01140-201ENST00000461990 ZMYM4Q5VZL5 1548 aa11.84□□□□□ -0.51
LINC01140-201ENST00000461990 USP19O94966 1318 aa11.84□□□□□ -0.51
LINC01140-201ENST00000461990 CNGB1Q14028 1251 aaPredicted RBP11.84□□□□□ -0.51
LINC01140-201ENST00000461990 MIA2Q96PC5 1412 aa11.84□□□□□ -0.51
LINC01140-201ENST00000461990 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.83□□□□□ -0.51
LINC01140-201ENST00000461990 GRPEL1Q9HAV7 217 aa11.83□□□□□ -0.51
LINC01140-201ENST00000461990 NLRP1Q9C000 1473 aa11.83□□□□□ -0.52
LINC01140-201ENST00000461990 INSRP06213 1382 aa11.83□□□□□ -0.52
LINC01140-201ENST00000461990 FAM50AQ14320 339 aaKnown RBP11.83□□□□□ -0.52
LINC01140-201ENST00000461990 AQRO60306 1485 aaKnown RBP eCLIP11.82□□□□□ -0.52
LINC01140-201ENST00000461990 CCDC144AA2RUR9 1427 aa11.82□□□□□ -0.52
LINC01140-201ENST00000461990 GCC2Q8IWJ2 1684 aa11.81□□□□□ -0.52
LINC01140-201ENST00000461990 KIF20AO95235 890 aa11.81□□□□□ -0.52
LINC01140-201ENST00000461990 NAIPQ13075 1403 aa11.81□□□□□ -0.52
LINC01140-201ENST00000461990 DENND4BO75064 1496 aaPredicted RBP11.81□□□□□ -0.52
LINC01140-201ENST00000461990 BRD4O60885 1362 aaPredicted RBP11.81□□□□□ -0.52
LINC01140-201ENST00000461990 CTTNBP2Q8WZ74 1663 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms