RNA–Protein interactions for RNA: ENST00000461862.5

SCNM1-204, Transcript of sodium channel modifier 1, humanhuman

TSL 2

Gene SCNM1, Length 1,094 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNM1-204ENST00000461862 RGL2O15211 777 aa17.34■□□□□ 0.37
SCNM1-204ENST00000461862 CFTRP13569 1480 aa17.34■□□□□ 0.37
SCNM1-204ENST00000461862 KIF21AQ7Z4S6 1674 aa17.34■□□□□ 0.37
SCNM1-204ENST00000461862 L3MBTL3Q96JM7 780 aaPredicted RBP17.3■□□□□ 0.36
SCNM1-204ENST00000461862 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.28■□□□□ 0.36
SCNM1-204ENST00000461862 BCL11BQ9C0K0 894 aaPredicted RBP17.27■□□□□ 0.36
SCNM1-204ENST00000461862 PDS5BQ9NTI5 1447 aa17.26■□□□□ 0.35
SCNM1-204ENST00000461862 THOC2Q8NI27 1593 aaKnown RBP17.26■□□□□ 0.35
SCNM1-204ENST00000461862 FAM163AQ96GL9 167 aaPredicted RBP17.25■□□□□ 0.35
SCNM1-204ENST00000461862 FANCD2Q9BXW9 1451 aa17.24■□□□□ 0.35
SCNM1-204ENST00000461862 C3orf67Q6ZVT6 689 aa17.24■□□□□ 0.35
SCNM1-204ENST00000461862 TAOK2Q9UL54 1235 aa17.23■□□□□ 0.35
SCNM1-204ENST00000461862 POTEMA6NI47 508 aa17.21■□□□□ 0.35
SCNM1-204ENST00000461862 SOX12O15370 315 aa17.21■□□□□ 0.35
SCNM1-204ENST00000461862 MS4A4AQ96JQ5 239 aa17.21■□□□□ 0.35
SCNM1-204ENST00000461862 BOLA1Q9Y3E2 137 aa17.21■□□□□ 0.35
SCNM1-204ENST00000461862 STK24Q9Y6E0 443 aa17.21■□□□□ 0.35
SCNM1-204ENST00000461862 PHF8Q9UPP1 1060 aa17.2■□□□□ 0.34
SCNM1-204ENST00000461862 PRDM2Q13029 1718 aa17.19■□□□□ 0.34
SCNM1-204ENST00000461862 POTEGQ6S5H5 508 aa17.19■□□□□ 0.34
SCNM1-204ENST00000461862 STK25O00506 426 aa17.18■□□□□ 0.34
SCNM1-204ENST00000461862 CEP164Q9UPV0 1460 aa17.18■□□□□ 0.34
SCNM1-204ENST00000461862 MRC2Q9UBG0 1479 aa17.15■□□□□ 0.34
SCNM1-204ENST00000461862 TMEM121BQ9BXQ6 578 aaPredicted RBP17.14■□□□□ 0.33
SCNM1-204ENST00000461862 URB2Q14146 1524 aaKnown RBP17.14■□□□□ 0.33
SCNM1-204ENST00000461862 FBXO22Q8NEZ5 403 aa17.11■□□□□ 0.33
SCNM1-204ENST00000461862 WDR62O43379 1518 aa17.1■□□□□ 0.33
SCNM1-204ENST00000461862 ABCC8Q09428 1581 aa17.1■□□□□ 0.33
SCNM1-204ENST00000461862 G3V3G9 751 aa17.09■□□□□ 0.33
SCNM1-204ENST00000461862 ST18O60284 1047 aa17.09■□□□□ 0.33
SCNM1-204ENST00000461862 MFRPQ9BY79 579 aa17.09■□□□□ 0.33
SCNM1-204ENST00000461862 CUX2O14529 1486 aa17.08■□□□□ 0.32
SCNM1-204ENST00000461862 MICALL2Q8IY33 904 aa17.08■□□□□ 0.32
SCNM1-204ENST00000461862 NLRP6P59044 892 aa17.05■□□□□ 0.32
SCNM1-204ENST00000461862 WRNQ14191 1432 aaPredicted RBP eCLIP17.03■□□□□ 0.32
SCNM1-204ENST00000461862 TOPBP1Q92547 1522 aa17.01■□□□□ 0.31
SCNM1-204ENST00000461862 SNPHO15079 494 aa17■□□□□ 0.31
SCNM1-204ENST00000461862 TMEM92Q6UXU6 159 aa16.99■□□□□ 0.31
SCNM1-204ENST00000461862 BIVM-ERCC5R4GMW8 1640 aa16.97■□□□□ 0.31
SCNM1-204ENST00000461862 SYNJ1O43426 1573 aa16.97■□□□□ 0.31
SCNM1-204ENST00000461862 CUX1P39880 1505 aa16.96■□□□□ 0.31
SCNM1-204ENST00000461862 TOP2BQ02880 1626 aa16.96■□□□□ 0.3
SCNM1-204ENST00000461862 HS6ST3Q8IZP7 471 aa16.95■□□□□ 0.3
SCNM1-204ENST00000461862 DNMBPQ6XZF7 1577 aa16.94■□□□□ 0.3
SCNM1-204ENST00000461862 HOXB3P14651 431 aaPredicted RBP16.9■□□□□ 0.3
SCNM1-204ENST00000461862 ZNF608Q9ULD9 1512 aaPredicted RBP16.89■□□□□ 0.29
SCNM1-204ENST00000461862 RAD54L2Q9Y4B4 1467 aa16.88■□□□□ 0.29
SCNM1-204ENST00000461862 POLA1P09884 1462 aaPredicted RBP16.87■□□□□ 0.29
SCNM1-204ENST00000461862 EEA1Q15075 1411 aa16.87■□□□□ 0.29
SCNM1-204ENST00000461862 CHGAP10645 457 aaKnown RBP16.86■□□□□ 0.29
SCNM1-204ENST00000461862 FGD5Q6ZNL6 1462 aa16.86■□□□□ 0.29
SCNM1-204ENST00000461862 MARVELD3Q96A59 401 aa16.85■□□□□ 0.29
SCNM1-204ENST00000461862 PCDH10Q9P2E7 1040 aa16.83■□□□□ 0.28
SCNM1-204ENST00000461862 PPP1R37O75864 691 aa16.82■□□□□ 0.28
SCNM1-204ENST00000461862 TARBP1Q13395 1621 aaKnown RBP16.81■□□□□ 0.28
SCNM1-204ENST00000461862 IFT140Q96RY7 1462 aa16.8■□□□□ 0.28
SCNM1-204ENST00000461862 NKX1-1Q15270 411 aaPredicted RBP16.78■□□□□ 0.28
SCNM1-204ENST00000461862 DNAJC5Q9H3Z4 198 aa16.77■□□□□ 0.28
SCNM1-204ENST00000461862 AQRO60306 1485 aaKnown RBP eCLIP16.77■□□□□ 0.28
SCNM1-204ENST00000461862 SOGA1O94964 1423 aa16.77■□□□□ 0.27
SCNM1-204ENST00000461862 CDAN1Q8IWY9 1227 aa16.76■□□□□ 0.27
SCNM1-204ENST00000461862 TDRD9Q8NDG6 1382 aaKnown RBP16.76■□□□□ 0.27
SCNM1-204ENST00000461862 DOK7Q18PE1 504 aa16.75■□□□□ 0.27
SCNM1-204ENST00000461862 PLSCR2Q9NRY7 297 aa16.74■□□□□ 0.27
SCNM1-204ENST00000461862 EIF4G3O43432 1585 aaKnown RBP16.73■□□□□ 0.27
SCNM1-204ENST00000461862 KIF3CO14782 793 aa16.73■□□□□ 0.27
SCNM1-204ENST00000461862 EMP3P54852 163 aa16.72■□□□□ 0.27
SCNM1-204ENST00000461862 FAM9AQ8IZU1 332 aaPredicted RBP16.7■□□□□ 0.26
SCNM1-204ENST00000461862 ZNF710Q8N1W2 664 aa16.69■□□□□ 0.26
SCNM1-204ENST00000461862 WDR97A6NE52 1622 aa16.68■□□□□ 0.26
SCNM1-204ENST00000461862 POTEB3A0JP26 581 aa16.68■□□□□ 0.26
SCNM1-204ENST00000461862 C2orf72A6NCS6 295 aa16.68■□□□□ 0.26
SCNM1-204ENST00000461862 HOXB1P14653 301 aaPredicted RBP16.68■□□□□ 0.26
SCNM1-204ENST00000461862 POTEBQ6S5H4 581 aa16.68■□□□□ 0.26
SCNM1-204ENST00000461862 RUSC2Q8N2Y8 1516 aa16.66■□□□□ 0.26
SCNM1-204ENST00000461862 LOC105371045A0A1W2PR82 267 aa16.65■□□□□ 0.26
SCNM1-204ENST00000461862 KIF21BO75037 1637 aa16.65■□□□□ 0.26
SCNM1-204ENST00000461862 ABCA10Q8WWZ4 1543 aa16.63■□□□□ 0.25
SCNM1-204ENST00000461862 FAM205CA6NFA0 338 aa16.62■□□□□ 0.25
SCNM1-204ENST00000461862 RIMBP2O15034 1052 aa16.62■□□□□ 0.25
SCNM1-204ENST00000461862 HS3ST6Q96QI5 342 aa16.62■□□□□ 0.25
SCNM1-204ENST00000461862 KIF27Q86VH2 1401 aa16.62■□□□□ 0.25
SCNM1-204ENST00000461862 GPR153Q6NV75 609 aa16.6■□□□□ 0.25
SCNM1-204ENST00000461862 ZSWIM6Q9HCJ5 1215 aa16.59■□□□□ 0.25
SCNM1-204ENST00000461862 GOLGA3Q08378 1498 aa16.59■□□□□ 0.25
SCNM1-204ENST00000461862 SNAPC4Q5SXM2 1469 aa16.59■□□□□ 0.25
SCNM1-204ENST00000461862 ABCA5Q8WWZ7 1642 aa16.59■□□□□ 0.25
SCNM1-204ENST00000461862 GAPVD1Q14C86 1478 aa16.57■□□□□ 0.24
SCNM1-204ENST00000461862 TMC2Q8TDI7 906 aa16.57■□□□□ 0.24
SCNM1-204ENST00000461862 ERICH3Q5RHP9 1530 aa16.55■□□□□ 0.24
SCNM1-204ENST00000461862 GRIN2BQ13224 1484 aa16.53■□□□□ 0.24
SCNM1-204ENST00000461862 PBRM1Q86U86 1689 aa16.53■□□□□ 0.24
SCNM1-204ENST00000461862 ARSIQ5FYB1 569 aa16.52■□□□□ 0.24
SCNM1-204ENST00000461862 GTPBP6O43824 516 aaPredicted RBP16.51■□□□□ 0.23
SCNM1-204ENST00000461862 KHSRPQ92945 711 aaKnown RBP eCLIP16.51■□□□□ 0.23
SCNM1-204ENST00000461862 CHD1O14646 1710 aa16.5■□□□□ 0.23
SCNM1-204ENST00000461862 PRXQ9BXM0 1461 aa16.5■□□□□ 0.23
SCNM1-204ENST00000461862 RYDENQ9NUL5 291 aaKnown RBP16.5■□□□□ 0.23
SCNM1-204ENST00000461862 TNIKQ9UKE5 1360 aa16.5■□□□□ 0.23
SCNM1-204ENST00000461862 ERBB3P21860 1342 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 146 ms