RNA–Protein interactions for RNA: ENST00000461336.5

KCNIP3-204, Transcript of potassium voltage-gated channel interacting protein 3, humanhuman

TSL 2

Gene KCNIP3, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3-204ENST00000461336 ARHGEF12Q9NZN5 1544 aa19.82■□□□□ 0.76
KCNIP3-204ENST00000461336 RANGAP1P46060 587 aaPredicted RBP19.82■□□□□ 0.76
KCNIP3-204ENST00000461336 CFAP74Q9C0B2 1584 aa19.82■□□□□ 0.76
KCNIP3-204ENST00000461336 MAGI2Q86UL8 1455 aa19.8■□□□□ 0.76
KCNIP3-204ENST00000461336 MLECQ14165 292 aa19.79■□□□□ 0.76
KCNIP3-204ENST00000461336 HECW1Q76N89 1606 aa19.79■□□□□ 0.76
KCNIP3-204ENST00000461336 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.78■□□□□ 0.76
KCNIP3-204ENST00000461336 DMRT2Q9Y5R5 561 aa19.75■□□□□ 0.75
KCNIP3-204ENST00000461336 LTBP4Q8N2S1 1624 aa19.75■□□□□ 0.75
KCNIP3-204ENST00000461336 CEBPAP49715 358 aaPredicted RBP19.73■□□□□ 0.75
KCNIP3-204ENST00000461336 PTPRTO14522 1441 aa19.72■□□□□ 0.75
KCNIP3-204ENST00000461336 UHRF1BP1Q6BDS2 1440 aa19.7■□□□□ 0.74
KCNIP3-204ENST00000461336 IQSEC2Q5JU85 1478 aa19.7■□□□□ 0.74
KCNIP3-204ENST00000461336 CDK13Q14004 1512 aaKnown RBP19.7■□□□□ 0.74
KCNIP3-204ENST00000461336 PLCH2O75038 1416 aa19.68■□□□□ 0.74
KCNIP3-204ENST00000461336 C9orf84Q5VXU9 1444 aa19.68■□□□□ 0.74
KCNIP3-204ENST00000461336 FMN1Q68DA7 1419 aa19.68■□□□□ 0.74
KCNIP3-204ENST00000461336 ATP10AO60312 1499 aa19.68■□□□□ 0.74
KCNIP3-204ENST00000461336 SCAPERQ9BY12 1400 aa19.65■□□□□ 0.74
KCNIP3-204ENST00000461336 UBTFP17480 764 aaKnown RBP19.64■□□□□ 0.73
KCNIP3-204ENST00000461336 ARHGAP35Q9NRY4 1499 aa19.64■□□□□ 0.73
KCNIP3-204ENST00000461336 SETD1BQ9UPS6 1966 aaKnown RBP19.64■□□□□ 0.73
KCNIP3-204ENST00000461336 EHMT2Q96KQ7 1210 aa19.62■□□□□ 0.73
KCNIP3-204ENST00000461336 CDK11AQ9UQ88 783 aaPredicted RBP19.62■□□□□ 0.73
KCNIP3-204ENST00000461336 C3P01024 1663 aa19.6■□□□□ 0.73
KCNIP3-204ENST00000461336 EFCAB2Q5VUJ9 269 aa19.6■□□□□ 0.73
KCNIP3-204ENST00000461336 NCOA1Q15788 1441 aa19.58■□□□□ 0.72
KCNIP3-204ENST00000461336 TROQ12816 1431 aaPredicted RBP19.57■□□□□ 0.72
KCNIP3-204ENST00000461336 CHIC1Q5VXU3 224 aa19.56■□□□□ 0.72
KCNIP3-204ENST00000461336 ATP1B4Q9UN42 357 aaPredicted RBP19.56■□□□□ 0.72
KCNIP3-204ENST00000461336 MYO5CQ9NQX4 1742 aa19.56■□□□□ 0.72
KCNIP3-204ENST00000461336 KIF14Q15058 1648 aa19.55■□□□□ 0.72
KCNIP3-204ENST00000461336 KDM5CP41229 1560 aa19.55■□□□□ 0.72
KCNIP3-204ENST00000461336 REREQ9P2R6 1566 aa19.54■□□□□ 0.72
KCNIP3-204ENST00000461336 ZNF518AQ6AHZ1 1483 aa19.54■□□□□ 0.72
KCNIP3-204ENST00000461336 DIP2CQ9Y2E4 1556 aa19.53■□□□□ 0.72
KCNIP3-204ENST00000461336 CLIP1P30622 1438 aa19.52■□□□□ 0.72
KCNIP3-204ENST00000461336 TRAPPC8Q9Y2L5 1435 aa19.51■□□□□ 0.71
KCNIP3-204ENST00000461336 ARHGAP5Q13017 1502 aa19.49■□□□□ 0.71
KCNIP3-204ENST00000461336 ABCA6Q8N139 1617 aa19.48■□□□□ 0.71
KCNIP3-204ENST00000461336 MED1Q15648 1581 aaPredicted RBP19.47■□□□□ 0.71
KCNIP3-204ENST00000461336 CAMSAP1Q5T5Y3 1602 aa19.47■□□□□ 0.71
KCNIP3-204ENST00000461336 UBAP1LF5GYI3 381 aa19.46■□□□□ 0.71
KCNIP3-204ENST00000461336 AFAP1Q8N556 730 aa19.46■□□□□ 0.71
KCNIP3-204ENST00000461336 ZNF335Q9H4Z2 1342 aaPredicted RBP19.46■□□□□ 0.71
KCNIP3-204ENST00000461336 AGLP35573 1532 aa19.46■□□□□ 0.71
KCNIP3-204ENST00000461336 LRRIQ1Q96JM4 1722 aa19.45■□□□□ 0.7
KCNIP3-204ENST00000461336 CASKIN1Q8WXD9 1431 aa19.45■□□□□ 0.7
KCNIP3-204ENST00000461336 CCDC18Q5T9S5 1454 aa19.45■□□□□ 0.7
KCNIP3-204ENST00000461336 MLH3Q9UHC1 1453 aa19.44■□□□□ 0.7
KCNIP3-204ENST00000461336 CDC42BPBQ9Y5S2 1711 aa19.41■□□□□ 0.7
KCNIP3-204ENST00000461336 PREX2Q70Z35 1606 aa19.4■□□□□ 0.7
KCNIP3-204ENST00000461336 ABCC1P33527 1531 aa19.4■□□□□ 0.7
KCNIP3-204ENST00000461336 NPATQ14207 1427 aa19.39■□□□□ 0.69
KCNIP3-204ENST00000461336 CNTLNQ9NXG0 1405 aa19.39■□□□□ 0.69
KCNIP3-204ENST00000461336 NCKAP5LQ9HCH0 1330 aa19.37■□□□□ 0.69
KCNIP3-204ENST00000461336 FYCO1Q9BQS8 1478 aa19.36■□□□□ 0.69
KCNIP3-204ENST00000461336 MYT1LQ9UL68 1186 aa19.36■□□□□ 0.69
KCNIP3-204ENST00000461336 MROH2AA6NES4 1674 aa19.36■□□□□ 0.69
KCNIP3-204ENST00000461336 PLA2R1Q13018 1463 aa19.35■□□□□ 0.69
KCNIP3-204ENST00000461336 TCOF1Q13428 1488 aaKnown RBP19.35■□□□□ 0.69
KCNIP3-204ENST00000461336 HSPA1LP34931 641 aa19.35■□□□□ 0.69
KCNIP3-204ENST00000461336 ZNF142P52746 1687 aaPredicted RBP19.35■□□□□ 0.69
KCNIP3-204ENST00000461336 ESF1Q9H501 851 aaKnown RBP19.34■□□□□ 0.69
KCNIP3-204ENST00000461336 ITSN2Q9NZM3 1697 aa19.33■□□□□ 0.69
KCNIP3-204ENST00000461336 KIDINS220Q9ULH0 1771 aa19.33■□□□□ 0.68
KCNIP3-204ENST00000461336 MYO3AQ8NEV4 1616 aa19.33■□□□□ 0.68
KCNIP3-204ENST00000461336 CDC42BPAQ5VT25 1732 aa19.31■□□□□ 0.68
KCNIP3-204ENST00000461336 CEP170BQ9Y4F5 1589 aaPredicted RBP19.29■□□□□ 0.68
KCNIP3-204ENST00000461336 PKD2Q13563 968 aa19.29■□□□□ 0.68
KCNIP3-204ENST00000461336 ZMYM3Q14202 1370 aa19.28■□□□□ 0.68
KCNIP3-204ENST00000461336 GPATCH8Q9UKJ3 1502 aaKnown RBP19.27■□□□□ 0.68
KCNIP3-204ENST00000461336 SAMD9LQ8IVG5 1584 aa19.27■□□□□ 0.67
KCNIP3-204ENST00000461336 SUPT6HQ7KZ85 1726 aaKnown RBP19.26■□□□□ 0.67
KCNIP3-204ENST00000461336 KIAA1107Q9UPP5 1409 aa19.25■□□□□ 0.67
KCNIP3-204ENST00000461336 ALKQ9UM73 1620 aa19.23■□□□□ 0.67
KCNIP3-204ENST00000461336 PIP4K2BP78356 416 aa19.23■□□□□ 0.67
KCNIP3-204ENST00000461336 SYCP2Q9BX26 1530 aa19.23■□□□□ 0.67
KCNIP3-204ENST00000461336 PTPRKQ15262 1439 aa19.23■□□□□ 0.67
KCNIP3-204ENST00000461336 CLTCQ00610 1675 aaKnown RBP19.23■□□□□ 0.67
KCNIP3-204ENST00000461336 SCAF1Q9H7N4 1312 aaKnown RBP19.23■□□□□ 0.67
KCNIP3-204ENST00000461336 PLEKHH2Q8IVE3 1493 aa19.22■□□□□ 0.67
KCNIP3-204ENST00000461336 ZNF777Q9ULD5 760 aaPredicted RBP19.22■□□□□ 0.67
KCNIP3-204ENST00000461336 PPP6R1Q9UPN7 881 aa19.22■□□□□ 0.67
KCNIP3-204ENST00000461336 SPAG9O60271 1321 aaKnown RBP19.22■□□□□ 0.67
KCNIP3-204ENST00000461336 CPS1P31327 1500 aa19.2■□□□□ 0.66
KCNIP3-204ENST00000461336 HNRNPMP52272 730 aaKnown RBP eCLIP19.19■□□□□ 0.66
KCNIP3-204ENST00000461336 CFDP1Q9UEE9 299 aaPredicted RBP19.19■□□□□ 0.66
KCNIP3-204ENST00000461336 NEURL4Q96JN8 1562 aa19.19■□□□□ 0.66
KCNIP3-204ENST00000461336 CCNB3Q8WWL7 1395 aa19.19■□□□□ 0.66
KCNIP3-204ENST00000461336 TOM1O60784 492 aa19.18■□□□□ 0.66
KCNIP3-204ENST00000461336 PHF23Q9BUL5 403 aaPredicted RBP19.18■□□□□ 0.66
KCNIP3-204ENST00000461336 ATP7AQ04656 1500 aa19.18■□□□□ 0.66
KCNIP3-204ENST00000461336 PLXNC1O60486 1568 aa19.18■□□□□ 0.66
KCNIP3-204ENST00000461336 INO80Q9ULG1 1556 aaPredicted RBP19.17■□□□□ 0.66
KCNIP3-204ENST00000461336 DNMT1P26358 1616 aaKnown RBP19.16■□□□□ 0.66
KCNIP3-204ENST00000461336 MTUS2Q5JR59 1369 aa19.16■□□□□ 0.66
KCNIP3-204ENST00000461336 SHANK2Q9UPX8 1470 aa19.16■□□□□ 0.66
KCNIP3-204ENST00000461336 A2MP01023 1474 aa19.15■□□□□ 0.66
KCNIP3-204ENST00000461336 POLR1AO95602 1720 aaPredicted RBP19.14■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms