RNA–Protein interactions for RNA: ENST00000461173.5

DHFR2-203, Transcript of dihydrofolate reductase 2, humanhuman

TSL 1 (best)

Gene DHFR2, Length 1,831 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR2-203ENST00000461173 ABCA8O94911 1581 aa14.01□□□□□ -0.17
DHFR2-203ENST00000461173 RRP7BPQ9NSQ0 103 aa14.01□□□□□ -0.17
DHFR2-203ENST00000461173 ADGRL2O95490 1459 aa14.01□□□□□ -0.17
DHFR2-203ENST00000461173 GPATCH8Q9UKJ3 1502 aaKnown RBP14□□□□□ -0.17
DHFR2-203ENST00000461173 PLB1Q6P1J6 1458 aa14□□□□□ -0.17
DHFR2-203ENST00000461173 CCER2I3L3R5 266 aa13.99□□□□□ -0.17
DHFR2-203ENST00000461173 MPHOSPH9Q99550 1183 aa13.99□□□□□ -0.17
DHFR2-203ENST00000461173 KDM6BO15054 1643 aa13.99□□□□□ -0.17
DHFR2-203ENST00000461173 CHIC2Q9UKJ5 165 aa13.98□□□□□ -0.17
DHFR2-203ENST00000461173 PRG4Q92954 1404 aaPredicted RBP13.98□□□□□ -0.17
DHFR2-203ENST00000461173 CAMSAP2Q08AD1 1489 aa13.97□□□□□ -0.17
DHFR2-203ENST00000461173 ANKRD30BQ9BXX2 1392 aa13.97□□□□□ -0.17
DHFR2-203ENST00000461173 ADGBQ8N7X0 1667 aa13.96□□□□□ -0.17
DHFR2-203ENST00000461173 RPRD2Q5VT52 1461 aaKnown RBP13.96□□□□□ -0.18
DHFR2-203ENST00000461173 SHANK2Q9UPX8 1470 aa13.96□□□□□ -0.18
DHFR2-203ENST00000461173 NCOA1Q15788 1441 aa13.95□□□□□ -0.18
DHFR2-203ENST00000461173 DDX10Q13206 875 aaKnown RBP13.95□□□□□ -0.18
DHFR2-203ENST00000461173 TRIM52Q96A61 297 aa13.95□□□□□ -0.18
DHFR2-203ENST00000461173 CFDP1Q9UEE9 299 aaPredicted RBP13.95□□□□□ -0.18
DHFR2-203ENST00000461173 CROCC2H7BZ55 1655 aa13.94□□□□□ -0.18
DHFR2-203ENST00000461173 ABCC10Q5T3U5 1492 aa13.94□□□□□ -0.18
DHFR2-203ENST00000461173 SENP3Q9H4L4 574 aaPredicted RBP13.93□□□□□ -0.18
DHFR2-203ENST00000461173 KIF14Q15058 1648 aa13.93□□□□□ -0.18
DHFR2-203ENST00000461173 ATP10BO94823 1461 aa13.93□□□□□ -0.18
DHFR2-203ENST00000461173 PLEKHD1A6NEE1 506 aa13.91□□□□□ -0.18
DHFR2-203ENST00000461173 ARID3CA6NKF2 412 aa13.91□□□□□ -0.18
DHFR2-203ENST00000461173 ANP32CO43423 234 aa13.91□□□□□ -0.18
DHFR2-203ENST00000461173 ZNF644Q9H582 1327 aaPredicted RBP13.91□□□□□ -0.18
DHFR2-203ENST00000461173 ANKRD30AQ9BXX3 1397 aa13.9□□□□□ -0.18
DHFR2-203ENST00000461173 FBLN2P98095 1184 aa13.9□□□□□ -0.18
DHFR2-203ENST00000461173 TEX14Q8IWB6 1497 aa13.9□□□□□ -0.18
DHFR2-203ENST00000461173 PZPP20742 1482 aa13.89□□□□□ -0.19
DHFR2-203ENST00000461173 CDC42BPAQ5VT25 1732 aa13.88□□□□□ -0.19
DHFR2-203ENST00000461173 ARHGEF5Q12774 1597 aa13.88□□□□□ -0.19
DHFR2-203ENST00000461173 SHROOM2Q13796 1616 aa13.87□□□□□ -0.19
DHFR2-203ENST00000461173 EIF4G2P78344 907 aaKnown RBP eCLIP13.87□□□□□ -0.19
DHFR2-203ENST00000461173 L3MBTL2Q969R5 705 aa13.87□□□□□ -0.19
DHFR2-203ENST00000461173 PTPRGP23470 1445 aa13.86□□□□□ -0.19
DHFR2-203ENST00000461173 KDM5DQ9BY66 1539 aa13.86□□□□□ -0.19
DHFR2-203ENST00000461173 KIAA1107Q9UPP5 1409 aa13.86□□□□□ -0.19
DHFR2-203ENST00000461173 RSPH4AQ5TD94 716 aa13.85□□□□□ -0.19
DHFR2-203ENST00000461173 SLC4A1APQ9BWU0 796 aaKnown RBP13.85□□□□□ -0.19
DHFR2-203ENST00000461173 ANKRD50Q9ULJ7 1429 aa13.85□□□□□ -0.19
DHFR2-203ENST00000461173 HSPA5P11021 654 aaKnown RBP13.83□□□□□ -0.2
DHFR2-203ENST00000461173 C9orf84Q5VXU9 1444 aa13.83□□□□□ -0.2
DHFR2-203ENST00000461173 MBD5Q9P267 1494 aa13.82□□□□□ -0.2
DHFR2-203ENST00000461173 SPATA31E1Q6ZUB1 1445 aa13.82□□□□□ -0.2
DHFR2-203ENST00000461173 KCNH8Q96L42 1107 aa13.81□□□□□ -0.2
DHFR2-203ENST00000461173 HIRIP3Q9BW71 556 aaPredicted RBP13.8□□□□□ -0.2
DHFR2-203ENST00000461173 WASHC2AQ641Q2 1341 aa13.8□□□□□ -0.2
DHFR2-203ENST00000461173 PREX2Q70Z35 1606 aa13.8□□□□□ -0.2
DHFR2-203ENST00000461173 CHD1O14646 1710 aa13.79□□□□□ -0.2
DHFR2-203ENST00000461173 TSPY4P0CV99 314 aa13.78□□□□□ -0.2
DHFR2-203ENST00000461173 TSPY10P0CW01 314 aa13.78□□□□□ -0.2
DHFR2-203ENST00000461173 SUPT16HQ9Y5B9 1047 aaKnown RBP13.78□□□□□ -0.2
DHFR2-203ENST00000461173 CNTLNQ9NXG0 1405 aa13.78□□□□□ -0.2
DHFR2-203ENST00000461173 POLR1AO95602 1720 aaPredicted RBP13.78□□□□□ -0.2
DHFR2-203ENST00000461173 UHRF1BP1Q6BDS2 1440 aa13.78□□□□□ -0.2
DHFR2-203ENST00000461173 CCDC141Q6ZP82 1450 aa13.78□□□□□ -0.2
DHFR2-203ENST00000461173 ARHGEF12Q9NZN5 1544 aa13.77□□□□□ -0.2
DHFR2-203ENST00000461173 CCDC7Q96M83 1385 aa13.77□□□□□ -0.2
DHFR2-203ENST00000461173 MAST1Q9Y2H9 1570 aa13.77□□□□□ -0.2
DHFR2-203ENST00000461173 FOXD1Q16676 465 aa13.77□□□□□ -0.21
DHFR2-203ENST00000461173 ZNF777Q9ULD5 760 aaPredicted RBP13.76□□□□□ -0.21
DHFR2-203ENST00000461173 ABCC2Q92887 1545 aa13.76□□□□□ -0.21
DHFR2-203ENST00000461173 PLEKHH2Q8IVE3 1493 aa13.76□□□□□ -0.21
DHFR2-203ENST00000461173 NBPF8Q3BBV2 869 aa13.76□□□□□ -0.21
DHFR2-203ENST00000461173 ARID4BQ4LE39 1312 aaPredicted RBP13.75□□□□□ -0.21
DHFR2-203ENST00000461173 CDC42BPBQ9Y5S2 1711 aa13.75□□□□□ -0.21
DHFR2-203ENST00000461173 SAMD9LQ8IVG5 1584 aa13.74□□□□□ -0.21
DHFR2-203ENST00000461173 KIF15Q9NS87 1388 aa13.74□□□□□ -0.21
DHFR2-203ENST00000461173 PKD2Q13563 968 aa13.74□□□□□ -0.21
DHFR2-203ENST00000461173 UHRF1BP1LA0JNW5 1464 aa13.73□□□□□ -0.21
DHFR2-203ENST00000461173 NUP155O75694 1391 aa13.73□□□□□ -0.21
DHFR2-203ENST00000461173 RALGAPBQ86X10 1494 aa13.7□□□□□ -0.22
DHFR2-203ENST00000461173 PLXNC1O60486 1568 aa13.7□□□□□ -0.22
DHFR2-203ENST00000461173 CLASP1Q7Z460 1538 aa13.7□□□□□ -0.22
DHFR2-203ENST00000461173 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.7□□□□□ -0.22
DHFR2-203ENST00000461173 UNC13BO14795 1591 aa13.68□□□□□ -0.22
DHFR2-203ENST00000461173 HNRNPMP52272 730 aaKnown RBP eCLIP13.67□□□□□ -0.22
DHFR2-203ENST00000461173 TTC37Q6PGP7 1564 aa13.67□□□□□ -0.22
DHFR2-203ENST00000461173 MYO5CQ9NQX4 1742 aa13.67□□□□□ -0.22
DHFR2-203ENST00000461173 KIF7Q2M1P5 1343 aa13.67□□□□□ -0.22
DHFR2-203ENST00000461173 C11orf95C9JLR9 678 aaPredicted RBP13.67□□□□□ -0.22
DHFR2-203ENST00000461173 PRKRIP1Q9H875 184 aaPredicted RBP13.67□□□□□ -0.22
DHFR2-203ENST00000461173 KDM5CP41229 1560 aa13.66□□□□□ -0.22
DHFR2-203ENST00000461173 ARAP3Q8WWN8 1544 aa13.66□□□□□ -0.22
DHFR2-203ENST00000461173 FAM135AQ9P2D6 1515 aa13.66□□□□□ -0.22
DHFR2-203ENST00000461173 ARHGAP5Q13017 1502 aa13.66□□□□□ -0.22
DHFR2-203ENST00000461173 ROCK2O75116 1388 aaKnown RBP13.66□□□□□ -0.22
DHFR2-203ENST00000461173 USP47Q96K76 1375 aa13.66□□□□□ -0.22
DHFR2-203ENST00000461173 SYCP2Q9BX26 1530 aa13.65□□□□□ -0.22
DHFR2-203ENST00000461173 PLCH2O75038 1416 aa13.65□□□□□ -0.22
DHFR2-203ENST00000461173 ATP10AO60312 1499 aa13.64□□□□□ -0.23
DHFR2-203ENST00000461173 MAGI2Q86UL8 1455 aa13.64□□□□□ -0.23
DHFR2-203ENST00000461173 ERBINQ96RT1 1412 aa13.63□□□□□ -0.23
DHFR2-203ENST00000461173 DUOX2Q9NRD8 1548 aa13.63□□□□□ -0.23
DHFR2-203ENST00000461173 IQGAP3Q86VI3 1631 aa13.62□□□□□ -0.23
DHFR2-203ENST00000461173 ERCC6L2Q5T890 1561 aa13.62□□□□□ -0.23
DHFR2-203ENST00000461173 NEFLP07196 543 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms