RNA–Protein interactions for RNA: ENST00000461047.2

NUP98-208, Transcript of nucleoporin 98, humanhuman

TSL 3

Gene NUP98, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-208ENST00000461047 EFCAB3Q8N7B9 438 aa10.15□□□□□ -0.78
NUP98-208ENST00000461047 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.15□□□□□ -0.78
NUP98-208ENST00000461047 ERCC6Q03468 1493 aa10.13□□□□□ -0.79
NUP98-208ENST00000461047 STK24Q9Y6E0 443 aa10.12□□□□□ -0.79
NUP98-208ENST00000461047 NESP48681 1621 aa10.11□□□□□ -0.79
NUP98-208ENST00000461047 STK25O00506 426 aa10.11□□□□□ -0.79
NUP98-208ENST00000461047 BCL11BQ9C0K0 894 aaPredicted RBP10.11□□□□□ -0.79
NUP98-208ENST00000461047 RGL2O15211 777 aa10.1□□□□□ -0.79
NUP98-208ENST00000461047 SOX12O15370 315 aa10.1□□□□□ -0.79
NUP98-208ENST00000461047 ILDR1Q86SU0 546 aaPredicted RBP10.09□□□□□ -0.79
NUP98-208ENST00000461047 FAM163AQ96GL9 167 aaPredicted RBP10.08□□□□□ -0.8
NUP98-208ENST00000461047 FANCD2Q9BXW9 1451 aa10.08□□□□□ -0.8
NUP98-208ENST00000461047 DPY19L2Q6NUT2 758 aa10.07□□□□□ -0.8
NUP98-208ENST00000461047 BOLA1Q9Y3E2 137 aa10.07□□□□□ -0.8
NUP98-208ENST00000461047 CEP164Q9UPV0 1460 aa10.06□□□□□ -0.8
NUP98-208ENST00000461047 SNPHO15079 494 aa10.03□□□□□ -0.8
NUP98-208ENST00000461047 NLRP6P59044 892 aa10.03□□□□□ -0.8
NUP98-208ENST00000461047 ABCC8Q09428 1581 aa10.02□□□□□ -0.81
NUP98-208ENST00000461047 PHF8Q9UPP1 1060 aa10.02□□□□□ -0.81
NUP98-208ENST00000461047 MRC2Q9UBG0 1479 aa10□□□□□ -0.81
NUP98-208ENST00000461047 POTEMA6NI47 508 aa10□□□□□ -0.81
NUP98-208ENST00000461047 POTEGQ6S5H5 508 aa9.98□□□□□ -0.81
NUP98-208ENST00000461047 PRDM2Q13029 1718 aa9.97□□□□□ -0.81
NUP98-208ENST00000461047 WRNQ14191 1432 aaPredicted RBP eCLIP9.96□□□□□ -0.82
NUP98-208ENST00000461047 MICALL2Q8IY33 904 aa9.95□□□□□ -0.82
NUP98-208ENST00000461047 MS4A4AQ96JQ5 239 aa9.95□□□□□ -0.82
NUP98-208ENST00000461047 KIF21AQ7Z4S6 1674 aa9.94□□□□□ -0.82
NUP98-208ENST00000461047 TMEM121BQ9BXQ6 578 aaPredicted RBP9.94□□□□□ -0.82
NUP98-208ENST00000461047 CHGAP10645 457 aaKnown RBP9.93□□□□□ -0.82
NUP98-208ENST00000461047 MFRPQ9BY79 579 aa9.93□□□□□ -0.82
NUP98-208ENST00000461047 CUX2O14529 1486 aa9.92□□□□□ -0.82
NUP98-208ENST00000461047 ST18O60284 1047 aa9.92□□□□□ -0.82
NUP98-208ENST00000461047 FBXO22Q8NEZ5 403 aa9.92□□□□□ -0.82
NUP98-208ENST00000461047 HS6ST3Q8IZP7 471 aa9.91□□□□□ -0.82
NUP98-208ENST00000461047 DNMBPQ6XZF7 1577 aa9.91□□□□□ -0.82
NUP98-208ENST00000461047 WDR62O43379 1518 aa9.91□□□□□ -0.82
NUP98-208ENST00000461047 URB2Q14146 1524 aaKnown RBP9.91□□□□□ -0.82
NUP98-208ENST00000461047 TOPBP1Q92547 1522 aa9.91□□□□□ -0.82
NUP98-208ENST00000461047 LCE2DQ5TA82 110 aaPredicted RBP9.9□□□□□ -0.82
NUP98-208ENST00000461047 SOGA1O94964 1423 aa9.88□□□□□ -0.83
NUP98-208ENST00000461047 THOC2Q8NI27 1593 aaKnown RBP9.88□□□□□ -0.83
NUP98-208ENST00000461047 CUX1P39880 1505 aa9.87□□□□□ -0.83
NUP98-208ENST00000461047 IFT140Q96RY7 1462 aa9.86□□□□□ -0.83
NUP98-208ENST00000461047 ZNF710Q8N1W2 664 aa9.86□□□□□ -0.83
NUP98-208ENST00000461047 PCDH10Q9P2E7 1040 aa9.86□□□□□ -0.83
NUP98-208ENST00000461047 TOP2BQ02880 1626 aa9.85□□□□□ -0.83
NUP98-208ENST00000461047 FGD5Q6ZNL6 1462 aa9.85□□□□□ -0.83
NUP98-208ENST00000461047 RIMBP2O15034 1052 aa9.84□□□□□ -0.83
NUP98-208ENST00000461047 DOK7Q18PE1 504 aa9.84□□□□□ -0.83
NUP98-208ENST00000461047 POLA1P09884 1462 aaPredicted RBP9.84□□□□□ -0.83
NUP98-208ENST00000461047 RYDENQ9NUL5 291 aaKnown RBP9.83□□□□□ -0.84
NUP98-208ENST00000461047 SYNJ1O43426 1573 aa9.81□□□□□ -0.84
NUP98-208ENST00000461047 BIVM-ERCC5R4GMW8 1640 aa9.81□□□□□ -0.84
NUP98-208ENST00000461047 EMP3P54852 163 aa9.8□□□□□ -0.84
NUP98-208ENST00000461047 TMEM92Q6UXU6 159 aa9.8□□□□□ -0.84
NUP98-208ENST00000461047 MARVELD3Q96A59 401 aa9.8□□□□□ -0.84
NUP98-208ENST00000461047 RAD54L2Q9Y4B4 1467 aa9.79□□□□□ -0.84
NUP98-208ENST00000461047 TMC2Q8TDI7 906 aa9.78□□□□□ -0.84
NUP98-208ENST00000461047 KIF27Q86VH2 1401 aa9.78□□□□□ -0.84
NUP98-208ENST00000461047 ABCA10Q8WWZ4 1543 aa9.77□□□□□ -0.84
NUP98-208ENST00000461047 TDRD9Q8NDG6 1382 aaKnown RBP9.77□□□□□ -0.84
NUP98-208ENST00000461047 HOXB3P14651 431 aaPredicted RBP9.77□□□□□ -0.85
NUP98-208ENST00000461047 PLSCR2Q9NRY7 297 aa9.77□□□□□ -0.85
NUP98-208ENST00000461047 PPP1R37O75864 691 aa9.76□□□□□ -0.85
NUP98-208ENST00000461047 CDAN1Q8IWY9 1227 aa9.76□□□□□ -0.85
NUP98-208ENST00000461047 AMER1Q5JTC6 1135 aaPredicted RBP9.75□□□□□ -0.85
NUP98-208ENST00000461047 DNAJC5Q9H3Z4 198 aa9.75□□□□□ -0.85
NUP98-208ENST00000461047 GAPVD1Q14C86 1478 aa9.74□□□□□ -0.85
NUP98-208ENST00000461047 WDR97A6NE52 1622 aa9.74□□□□□ -0.85
NUP98-208ENST00000461047 TARBP1Q13395 1621 aaKnown RBP9.74□□□□□ -0.85
NUP98-208ENST00000461047 AQRO60306 1485 aaKnown RBP eCLIP9.73□□□□□ -0.85
NUP98-208ENST00000461047 C2orf72A6NCS6 295 aa9.73□□□□□ -0.85
NUP98-208ENST00000461047 ZSWIM6Q9HCJ5 1215 aa9.73□□□□□ -0.85
NUP98-208ENST00000461047 EEA1Q15075 1411 aa9.73□□□□□ -0.85
NUP98-208ENST00000461047 GRIN2BQ13224 1484 aa9.72□□□□□ -0.85
NUP98-208ENST00000461047 HOXB1P14653 301 aaPredicted RBP9.72□□□□□ -0.85
NUP98-208ENST00000461047 NKX1-1Q15270 411 aaPredicted RBP9.72□□□□□ -0.85
NUP98-208ENST00000461047 ZNF608Q9ULD9 1512 aaPredicted RBP9.72□□□□□ -0.85
NUP98-208ENST00000461047 FAM205CA6NFA0 338 aa9.71□□□□□ -0.86
NUP98-208ENST00000461047 CHMP7Q8WUX9 453 aaPredicted RBP9.71□□□□□ -0.86
NUP98-208ENST00000461047 FAM9AQ8IZU1 332 aaPredicted RBP9.69□□□□□ -0.86
NUP98-208ENST00000461047 ERBB3P21860 1342 aa9.68□□□□□ -0.86
NUP98-208ENST00000461047 KIF3CO14782 793 aa9.68□□□□□ -0.86
NUP98-208ENST00000461047 HS3ST6Q96QI5 342 aa9.68□□□□□ -0.86
NUP98-208ENST00000461047 IGF1RP08069 1367 aa9.67□□□□□ -0.86
NUP98-208ENST00000461047 ERICH3Q5RHP9 1530 aa9.66□□□□□ -0.86
NUP98-208ENST00000461047 MAGI1Q96QZ7 1491 aaPredicted RBP9.66□□□□□ -0.86
NUP98-208ENST00000461047 EIF4G3O43432 1585 aaKnown RBP9.66□□□□□ -0.86
NUP98-208ENST00000461047 FHAD1B1AJZ9 1412 aa9.65□□□□□ -0.86
NUP98-208ENST00000461047 CARMIL1Q5VZK9 1371 aa9.65□□□□□ -0.86
NUP98-208ENST00000461047 ABCA5Q8WWZ7 1642 aa9.64□□□□□ -0.87
NUP98-208ENST00000461047 ARSIQ5FYB1 569 aa9.64□□□□□ -0.87
NUP98-208ENST00000461047 GPR153Q6NV75 609 aa9.63□□□□□ -0.87
NUP98-208ENST00000461047 RTN4Q9NQC3 1192 aaKnown RBP9.63□□□□□ -0.87
NUP98-208ENST00000461047 SNAPC4Q5SXM2 1469 aa9.63□□□□□ -0.87
NUP98-208ENST00000461047 SYNJ2O15056 1496 aa9.62□□□□□ -0.87
NUP98-208ENST00000461047 GTPBP6O43824 516 aaPredicted RBP9.62□□□□□ -0.87
NUP98-208ENST00000461047 GPHNQ9NQX3 736 aaPredicted RBP9.62□□□□□ -0.87
NUP98-208ENST00000461047 RUSC2Q8N2Y8 1516 aa9.61□□□□□ -0.87
NUP98-208ENST00000461047 VARS2Q5ST30 1063 aaKnown RBP9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms